Wall clock time and date at job start Tue Mar 9 2021 12:56:26 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.34768 * 1 3 3 O 1.21288 * 119.99476 * 2 1 4 4 C 1.50697 * 120.00434 * 180.02562 * 2 1 3 5 5 H 1.09002 * 112.84782 * 309.66555 * 4 2 1 6 6 C 1.53786 * 113.61519 * 80.85965 * 4 2 1 7 7 C 1.54049 * 86.98426 * 140.01979 * 6 4 2 8 8 H 1.09003 * 113.61268 * 89.11946 * 7 6 4 9 9 N 1.46497 * 113.61947 * 220.02008 * 7 6 4 10 10 C 1.34773 * 120.00221 * 252.49496 * 9 7 6 11 11 O 1.21565 * 120.00103 * 0.02562 * 10 9 7 12 12 C 1.47725 * 120.00197 * 180.02562 * 10 9 7 13 13 C 1.39705 * 120.02034 * 359.72362 * 12 10 9 14 14 C 1.37671 * 119.97485 * 179.76476 * 13 12 10 15 15 C 1.39514 * 120.02032 * 0.51629 * 14 13 12 16 16 C 1.48276 * 119.97127 * 179.72047 * 15 14 13 17 17 C 1.39403 * 120.12282 * 179.74610 * 16 15 14 18 18 C 1.38003 * 119.87158 * 179.71975 * 17 16 15 19 19 C 1.38326 * 120.12343 * 0.53118 * 18 17 16 20 20 C 1.50707 * 119.87117 * 179.74306 * 19 18 17 21 21 O 1.42899 * 109.47204 * 245.02325 * 20 19 18 22 22 Si 1.86299 * 109.46876 * 5.02359 * 20 19 18 23 23 C 1.38336 * 120.26128 * 359.76905 * 19 18 17 24 24 C 1.37997 * 120.12284 * 359.94913 * 23 19 18 25 25 C 1.39504 * 120.04712 * 359.74106 * 15 14 13 26 26 C 1.37662 * 120.02826 * 359.97438 * 25 15 14 27 27 C 1.53781 * 113.61630 * 178.46913 * 4 2 1 28 28 H 0.97004 * 120.00000 * 180.02562 * 1 2 3 29 29 H 0.97001 * 120.00652 * 359.97438 * 1 2 3 30 30 H 1.08992 * 113.61675 * 254.61723 * 6 4 2 31 31 H 1.09000 * 113.60973 * 25.52011 * 6 4 2 32 32 H 0.97001 * 119.99862 * 72.50056 * 9 7 6 33 33 H 1.08004 * 120.01627 * 0.03129 * 13 12 10 34 34 H 1.07998 * 119.99357 * 180.23471 * 14 13 12 35 35 H 1.08003 * 120.06454 * 0.02562 * 17 16 15 36 36 H 1.08001 * 119.93581 * 180.27397 * 18 17 16 37 37 H 1.08999 * 109.46854 * 125.02643 * 20 19 18 38 38 H 0.96696 * 114.00132 * 180.02562 * 21 20 19 39 39 H 1.48498 * 110.00192 * 299.99778 * 22 20 19 40 40 H 1.48499 * 110.00030 * 61.31961 * 22 20 19 41 41 H 1.07999 * 119.94228 * 179.97438 * 23 19 18 42 42 H 1.08009 * 120.06603 * 179.97438 * 24 23 19 43 43 H 1.08003 * 119.98723 * 180.02562 * 25 15 14 44 44 H 1.07995 * 120.01697 * 180.02562 * 26 25 15 45 45 H 1.08999 * 113.61567 * 334.48200 * 27 4 2 46 46 H 1.08998 * 113.61196 * 105.38554 * 27 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.3477 0.0000 0.0000 3 8 1.9540 1.0504 0.0000 4 6 2.1013 -1.3050 -0.0006 5 1 1.7577 -1.9925 0.7724 6 6 2.2155 -1.9498 -1.3921 7 6 3.6596 -2.3258 -1.0097 8 1 3.7421 -3.2924 -0.5127 9 7 4.6179 -2.1648 -2.1060 10 6 5.1288 -3.2506 -2.7195 11 8 4.7941 -4.3637 -2.3634 12 6 6.0956 -3.0883 -3.8246 13 6 6.4762 -1.8092 -4.2380 14 6 7.3809 -1.6590 -5.2648 15 6 7.9093 -2.7834 -5.8995 16 6 8.8789 -2.6203 -7.0094 17 6 9.4129 -3.7417 -7.6423 18 6 10.3106 -3.5838 -8.6786 19 6 10.6889 -2.3160 -9.0822 20 6 11.6740 -2.1503 -10.2107 21 8 12.8726 -1.5524 -9.7127 22 14 12.0688 -3.8184 -10.9403 23 6 10.1671 -1.1996 -8.4537 24 6 9.2643 -1.3452 -7.4202 25 6 7.5258 -4.0610 -5.4910 26 6 6.6257 -4.2135 -4.4606 27 6 3.6291 -1.1342 -0.0381 28 1 -0.4850 -0.8401 0.0004 29 1 -0.4851 0.8400 0.0004 30 1 1.5607 -2.8102 -1.5297 31 1 2.1532 -1.2337 -2.2115 32 1 4.8848 -1.2766 -2.3903 33 1 6.0642 -0.9385 -3.7495 34 1 7.6782 -0.6705 -5.5821 35 1 9.1210 -4.7321 -7.3256 36 1 10.7215 -4.4519 -9.1726 37 1 11.2412 -1.5105 -10.9797 38 1 13.5528 -1.4151 -10.3861 39 1 12.6596 -4.7001 -9.9017 40 1 10.8358 -4.4368 -11.4902 41 1 10.4664 -0.2122 -8.7727 42 1 8.8578 -0.4729 -6.9299 43 1 7.9358 -4.9308 -5.9828 44 1 6.3292 -5.2026 -4.1443 45 1 3.9526 -0.1956 -0.4881 46 1 4.1146 -1.3365 0.9165 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_11684966_13158362.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:56:26 Heat of formation + Delta-G solvation = -27.821324 kcal Electronic energy + Delta-G solvation = -28830.253676 eV Core-core repulsion = 24651.616017 eV Total energy + Delta-G solvation = -4178.637659 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 353.146 amu Computer time = 1.10 seconds Orbital eigenvalues (eV) -41.79120 -41.19214 -40.57712 -39.35344 -38.40618 -37.51534 -34.94718 -34.56494 -33.96605 -32.67525 -31.69498 -30.96956 -27.70269 -26.77873 -26.64072 -24.78697 -24.46168 -22.81207 -22.55035 -21.92565 -21.40079 -20.58970 -19.17874 -18.61433 -18.38972 -18.13906 -17.86746 -17.18888 -16.96516 -16.62823 -16.45874 -16.17210 -15.94448 -15.78669 -15.48816 -15.29459 -15.10510 -15.05204 -14.79771 -14.47529 -14.37707 -14.27177 -13.89583 -13.71149 -13.59213 -13.50785 -13.27614 -12.92305 -12.59968 -12.45803 -12.29353 -12.25071 -11.92740 -11.79276 -11.73454 -11.16079 -10.93538 -10.86166 -10.67589 -10.29735 -10.16731 -10.13691 -10.10763 -9.17520 -4.96991 -0.78632 0.22325 0.28223 0.39279 1.28146 1.55932 1.60952 1.71462 1.94529 2.00197 2.48191 2.65838 2.90140 3.29527 3.34729 3.39197 3.42907 3.52801 3.65333 3.71708 3.74318 3.81299 3.85501 3.88018 3.96914 4.16129 4.19235 4.23095 4.24321 4.41520 4.50921 4.52952 4.59753 4.64374 4.69327 4.76427 4.81957 4.86825 4.94775 4.96060 5.01582 5.08915 5.09878 5.18344 5.29883 5.35898 5.45937 5.53417 5.71490 5.79133 5.86754 6.39100 6.44734 6.88911 7.05704 7.31945 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.838 5.838 2 C 0.524 3.476 3 O -0.593 6.593 4 C -0.129 4.129 5 H 0.145 0.855 6 C -0.127 4.127 7 C 0.119 3.881 8 H 0.113 0.887 9 N -0.703 5.703 10 C 0.560 3.440 11 O -0.576 6.576 12 C -0.151 4.151 13 C -0.074 4.074 14 C -0.118 4.118 15 C -0.024 4.024 16 C -0.059 4.059 17 C -0.109 4.109 18 C -0.142 4.142 19 C -0.088 4.088 20 C -0.078 4.078 21 O -0.563 6.563 22 Si 0.770 3.230 23 C -0.097 4.097 24 C -0.103 4.103 25 C -0.125 4.125 26 C -0.067 4.067 27 C -0.122 4.122 28 H 0.418 0.582 29 H 0.405 0.595 30 H 0.093 0.907 31 H 0.087 0.913 32 H 0.413 0.587 33 H 0.157 0.843 34 H 0.158 0.842 35 H 0.142 0.858 36 H 0.117 0.883 37 H 0.097 0.903 38 H 0.404 0.596 39 H -0.299 1.299 40 H -0.290 1.290 41 H 0.146 0.854 42 H 0.155 0.845 43 H 0.143 0.857 44 H 0.131 0.869 45 H 0.092 0.908 46 H 0.088 0.912 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.949 2.386 -3.844 4.623 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.401 5.401 2 C 0.310 3.690 3 O -0.474 6.474 4 C -0.151 4.151 5 H 0.163 0.837 6 C -0.166 4.166 7 C 0.014 3.986 8 H 0.131 0.869 9 N -0.354 5.354 10 C 0.348 3.652 11 O -0.457 6.457 12 C -0.154 4.154 13 C -0.092 4.092 14 C -0.135 4.135 15 C -0.024 4.024 16 C -0.059 4.059 17 C -0.127 4.127 18 C -0.159 4.159 19 C -0.088 4.088 20 C -0.188 4.188 21 O -0.373 6.373 22 Si 0.677 3.323 23 C -0.114 4.114 24 C -0.121 4.121 25 C -0.143 4.143 26 C -0.086 4.086 27 C -0.160 4.160 28 H 0.249 0.751 29 H 0.236 0.764 30 H 0.112 0.888 31 H 0.105 0.895 32 H 0.251 0.749 33 H 0.175 0.825 34 H 0.175 0.825 35 H 0.159 0.841 36 H 0.134 0.866 37 H 0.115 0.885 38 H 0.255 0.745 39 H -0.227 1.227 40 H -0.218 1.218 41 H 0.163 0.837 42 H 0.173 0.827 43 H 0.160 0.840 44 H 0.149 0.851 45 H 0.110 0.890 46 H 0.107 0.893 Dipole moment (debyes) X Y Z Total from point charges -1.146 1.303 -3.003 3.468 hybrid contribution -0.739 0.278 0.280 0.838 sum -1.884 1.582 -2.722 3.669 Atomic orbital electron populations 1.43814 1.06505 1.13782 1.76007 1.20744 0.83361 0.90967 0.73960 1.90743 1.69402 1.35239 1.51969 1.22593 0.96294 0.94935 1.01238 0.83719 1.23409 0.96958 1.01101 0.95156 1.22610 0.87979 1.00252 0.87748 0.86881 1.45828 1.45007 1.09100 1.35501 1.18502 0.80263 0.84385 0.82007 1.90763 1.62319 1.26245 1.66391 1.20031 1.01122 0.95285 0.98958 1.21483 0.95762 0.96111 0.95869 1.21469 0.96869 0.99315 0.95888 1.19107 0.95057 0.93988 0.94267 1.18937 0.97230 0.93901 0.95875 1.21388 0.96441 0.99513 0.95341 1.20978 0.99906 0.96492 0.98572 1.19849 0.97661 0.93486 0.97803 1.24794 0.86945 1.10188 0.96875 1.86440 1.26002 1.83995 1.40885 0.94441 0.82403 0.73409 0.82080 1.21209 0.95714 0.99138 0.95379 1.21632 0.96769 0.97113 0.96585 1.21360 0.98051 0.97492 0.97393 1.21247 0.94498 0.98879 0.94009 1.23226 0.94155 0.98170 1.00496 0.75077 0.76394 0.88811 0.89484 0.74866 0.82526 0.82473 0.84075 0.86568 0.88475 0.74480 1.22706 1.21760 0.83669 0.82701 0.83969 0.85101 0.88971 0.89290 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.84 5.11 8.87 -173.54 -1.54 3.57 16 2 C 0.52 0.33 7.63 87.66 0.67 1.00 16 3 O -0.59 -6.24 16.75 -3.05 -0.05 -6.29 16 4 C -0.13 0.58 4.14 -11.01 -0.05 0.53 16 5 H 0.15 -1.34 8.14 -2.39 -0.02 -1.36 16 6 C -0.13 0.52 7.45 31.21 0.23 0.75 16 7 C 0.12 -0.16 4.25 45.61 0.19 0.04 16 8 H 0.11 0.13 7.47 -2.39 -0.02 0.11 16 9 N -0.70 0.17 5.31 -442.59 -2.35 -2.18 16 10 C 0.56 3.39 7.77 86.75 0.67 4.07 16 11 O -0.58 -7.90 15.93 -3.92 -0.06 -7.97 16 12 C -0.15 -0.57 5.88 -20.06 -0.12 -0.68 16 13 C -0.07 0.11 9.52 22.49 0.21 0.33 16 14 C -0.12 0.14 9.41 22.44 0.21 0.35 16 15 C -0.02 -0.06 5.88 -19.99 -0.12 -0.17 16 16 C -0.06 -0.20 5.88 -20.05 -0.12 -0.31 16 17 C -0.11 -0.48 9.43 22.49 0.21 -0.26 16 18 C -0.14 -0.82 8.65 22.23 0.19 -0.62 16 19 C -0.09 -0.38 5.39 -19.82 -0.11 -0.49 16 20 C -0.08 0.07 2.79 71.24 0.20 0.27 16 21 O -0.56 0.38 12.81 -148.98 -1.91 -1.53 16 22 Si 0.77 -1.26 29.84 68.60 2.05 0.79 16 23 C -0.10 -0.22 9.67 22.24 0.21 -0.01 16 24 C -0.10 -0.11 9.43 22.49 0.21 0.10 16 25 C -0.13 -0.37 9.41 22.44 0.21 -0.16 16 26 C -0.07 -0.34 9.58 22.49 0.22 -0.12 16 27 C -0.12 0.28 7.15 31.12 0.22 0.50 16 28 H 0.42 -5.10 8.83 -92.71 -0.82 -5.92 16 29 H 0.41 -2.59 8.93 -92.71 -0.83 -3.42 16 30 H 0.09 -0.52 8.14 -2.39 -0.02 -0.53 16 31 H 0.09 -0.26 8.09 -2.39 -0.02 -0.28 16 32 H 0.41 -2.08 6.74 -92.71 -0.63 -2.71 16 33 H 0.16 -1.24 6.39 -2.91 -0.02 -1.26 16 34 H 0.16 -1.01 6.19 -2.91 -0.02 -1.03 16 35 H 0.14 0.12 6.19 -2.91 -0.02 0.10 16 36 H 0.12 0.63 4.85 -2.91 -0.01 0.61 16 37 H 0.10 -0.51 7.96 -2.39 -0.02 -0.53 16 38 H 0.40 -4.52 8.74 -74.06 -0.65 -5.17 16 39 H -0.30 -1.86 7.04 99.48 0.70 -1.16 16 40 H -0.29 -1.17 7.11 99.48 0.71 -0.46 16 41 H 0.15 -0.17 8.06 -2.91 -0.02 -0.19 16 42 H 0.16 -0.71 6.19 -2.91 -0.02 -0.73 16 43 H 0.14 -0.01 6.19 -2.91 -0.02 -0.03 16 44 H 0.13 0.79 7.64 -2.91 -0.02 0.77 16 45 H 0.09 0.01 7.43 -2.39 -0.02 -0.01 16 46 H 0.09 -0.28 8.14 -2.39 -0.02 -0.30 16 Total: 0.00 -29.71 383.25 -2.29 -32.00 By element: Atomic # 1 Polarization: -21.69 SS G_CDS: -1.79 Total: -23.49 kcal Atomic # 6 Polarization: 1.72 SS G_CDS: 3.37 Total: 5.09 kcal Atomic # 7 Polarization: 5.28 SS G_CDS: -3.89 Total: 1.39 kcal Atomic # 8 Polarization: -13.76 SS G_CDS: -2.02 Total: -15.78 kcal Atomic # 14 Polarization: -1.26 SS G_CDS: 2.05 Total: 0.79 kcal Total: -29.71 -2.29 -32.00 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_11684966_13158362.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 4.176 kcal (2) G-P(sol) polarization free energy of solvation -29.708 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -25.531 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.290 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -31.998 kcal (6) G-S(sol) free energy of system = (1) + (5) -27.821 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.10 seconds