Wall clock time and date at job start Tue Mar 9 2021 12:56:36 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.34780 * 1 3 3 O 1.21283 * 119.99957 * 2 1 4 4 C 1.50701 * 120.00160 * 180.02562 * 2 1 3 5 5 H 1.09001 * 112.84743 * 311.19373 * 4 2 1 6 6 C 1.53783 * 113.61528 * 82.49578 * 4 2 1 7 7 C 1.53780 * 87.07701 * 139.98390 * 6 4 2 8 8 H 1.09000 * 113.69333 * 89.13135 * 7 6 4 9 9 N 1.46508 * 113.61510 * 220.01815 * 7 6 4 10 10 C 1.34776 * 119.99914 * 252.49940 * 9 7 6 11 11 O 1.21576 * 120.00037 * 0.02562 * 10 9 7 12 12 C 1.47570 * 119.99629 * 179.97438 * 10 9 7 13 13 C 1.39421 * 120.11990 * 0.02562 * 12 10 9 14 14 C 1.39221 * 119.75512 * 179.97438 * 13 12 10 15 15 C 1.47814 * 119.99812 * 180.02562 * 14 13 12 16 16 C 1.35938 * 125.92902 * 179.97438 * 15 14 13 17 17 C 1.40970 * 106.74380 * 179.97438 * 16 15 14 18 18 C 1.34703 * 107.02536 * 359.97438 * 17 16 15 19 19 C 1.50704 * 125.66339 * 180.26371 * 18 17 16 20 20 O 1.42899 * 109.47097 * 64.71713 * 19 18 17 21 21 Si 1.86300 * 109.47328 * 184.71706 * 19 18 17 22 22 O 1.34344 * 108.67382 * 0.02562 * 18 17 16 23 23 C 1.39802 * 119.99626 * 0.26975 * 14 13 12 24 24 C 1.37805 * 120.24733 * 359.45111 * 23 14 13 25 25 C 1.38778 * 120.24659 * 0.55305 * 24 23 14 26 26 O 1.35650 * 120.00533 * 179.70001 * 25 24 23 27 27 C 1.53776 * 87.08465 * 334.56656 * 7 6 4 28 28 H 0.97002 * 119.99909 * 179.97438 * 1 2 3 29 29 H 0.97007 * 119.99754 * 359.97438 * 1 2 3 30 30 H 1.09005 * 113.61401 * 25.43919 * 6 4 2 31 31 H 1.08998 * 113.61418 * 254.53002 * 6 4 2 32 32 H 0.97002 * 119.99405 * 72.49592 * 9 7 6 33 33 H 1.07994 * 120.12671 * 359.97438 * 13 12 10 34 34 H 1.08005 * 126.62937 * 359.97438 * 16 15 14 35 35 H 1.07999 * 126.48774 * 180.02562 * 17 16 15 36 36 H 1.09004 * 109.47061 * 304.72159 * 19 18 17 37 37 H 0.96704 * 114.00304 * 60.00000 * 20 19 18 38 38 H 1.48497 * 109.99898 * 180.02562 * 21 19 18 39 39 H 1.48500 * 109.99802 * 301.32193 * 21 19 18 40 40 H 1.08003 * 119.87414 * 179.70905 * 23 14 13 41 41 H 1.08003 * 119.88140 * 180.29835 * 24 23 14 42 42 H 0.96698 * 113.99998 * 270.01760 * 26 25 24 43 43 H 1.09007 * 113.61668 * 139.97903 * 27 7 6 44 44 H 1.08995 * 113.61651 * 270.80195 * 27 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.3478 0.0000 0.0000 3 8 1.9542 1.0503 0.0000 4 6 2.1013 -1.3051 -0.0006 5 1 1.7400 -2.0027 0.7550 6 6 2.2500 -1.9300 -1.3978 7 6 3.6825 -2.3112 -0.9886 8 1 3.7551 -3.2850 -0.5042 9 7 4.6658 -2.1343 -2.0602 10 6 5.1906 -3.2112 -2.6777 11 8 4.8477 -4.3294 -2.3459 12 6 6.1806 -3.0329 -3.7574 13 6 6.5751 -1.7516 -4.1403 14 6 7.5100 -1.5922 -5.1595 15 6 7.9326 -0.2363 -5.5694 16 6 8.8328 0.0580 -6.5445 17 6 8.9300 1.4634 -6.5967 18 6 8.0928 1.9517 -5.6613 19 6 7.8639 3.4110 -5.3627 20 8 7.2683 4.0418 -6.4983 21 14 6.7280 3.5739 -3.8951 22 8 7.4918 0.9219 -5.0422 23 6 8.0453 -2.7144 -5.7988 24 6 7.6597 -3.9809 -5.4164 25 6 6.7284 -4.1517 -4.4018 26 8 6.3477 -5.4005 -4.0335 27 6 3.6296 -1.1340 -0.0006 28 1 -0.4850 -0.8401 -0.0004 29 1 -0.4850 0.8401 0.0004 30 1 2.2065 -1.2025 -2.2084 31 1 1.5999 -2.7891 -1.5633 32 1 4.9389 -1.2421 -2.3252 33 1 6.1571 -0.8860 -3.6482 34 1 9.3698 -0.6484 -7.1602 35 1 9.5565 2.0395 -7.2615 36 1 8.8172 3.8901 -5.1394 37 1 6.4151 3.6658 -6.7547 38 1 6.4938 5.0084 -3.5909 39 1 5.4362 2.8971 -4.1751 40 1 8.7670 -2.5883 -6.5924 41 1 8.0806 -4.8438 -5.9111 42 1 5.5850 -5.7392 -4.5219 43 1 4.0932 -1.3506 0.9619 44 1 3.9645 -0.1893 -0.4287 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_11684966_13259648.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:56:36 Heat of formation + Delta-G solvation = -76.320859 kcal Electronic energy + Delta-G solvation = -31362.737787 eV Core-core repulsion = 26828.396406 eV Total energy + Delta-G solvation = -4534.341381 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 359.129 amu Computer time = 0.98 seconds Orbital eigenvalues (eV) -43.70360 -41.82916 -41.11382 -39.75475 -38.40567 -38.18548 -37.81013 -34.85627 -34.53254 -34.12531 -32.75362 -32.24330 -30.05572 -27.42805 -26.77184 -26.40132 -25.20338 -23.62518 -23.02930 -22.25317 -21.63705 -21.29421 -20.58236 -19.56614 -19.15717 -18.60459 -18.34995 -17.88340 -17.64569 -17.47440 -16.99192 -16.67935 -16.53037 -16.25619 -16.21026 -15.96795 -15.81159 -15.47917 -15.22775 -14.86766 -14.49096 -14.38154 -14.26997 -13.94874 -13.80787 -13.66212 -13.54766 -13.34801 -13.21954 -13.11939 -12.90241 -12.43968 -12.27402 -12.18706 -11.85436 -11.72177 -11.06588 -11.02302 -10.85656 -10.81453 -10.69335 -10.48284 -10.31472 -10.05954 -8.90843 -4.99570 -0.55836 -0.21425 0.76883 1.13633 1.44599 1.48570 1.55113 1.69098 1.85698 1.89226 2.00713 2.62200 2.64664 3.11364 3.20486 3.29683 3.35088 3.40380 3.51557 3.64640 3.71922 3.85295 3.89366 4.02041 4.06110 4.20900 4.23592 4.35727 4.44489 4.52847 4.62878 4.64675 4.67882 4.69733 4.79531 4.86636 4.88865 4.95525 5.02591 5.09318 5.15083 5.20886 5.44864 5.47303 5.51556 5.84822 5.98354 6.32202 6.38834 6.43430 6.73846 7.09043 7.30476 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.839 5.839 2 C 0.523 3.477 3 O -0.593 6.593 4 C -0.129 4.129 5 H 0.147 0.853 6 C -0.127 4.127 7 C 0.122 3.878 8 H 0.116 0.884 9 N -0.709 5.709 10 C 0.560 3.440 11 O -0.554 6.554 12 C -0.180 4.180 13 C -0.053 4.053 14 C -0.042 4.042 15 C 0.022 3.978 16 C -0.189 4.189 17 C -0.179 4.179 18 C -0.055 4.055 19 C -0.032 4.032 20 O -0.535 6.535 21 Si 0.760 3.240 22 O -0.175 6.175 23 C -0.044 4.044 24 C -0.146 4.146 25 C 0.166 3.834 26 O -0.493 6.493 27 C -0.124 4.124 28 H 0.418 0.582 29 H 0.405 0.595 30 H 0.082 0.918 31 H 0.096 0.904 32 H 0.409 0.591 33 H 0.144 0.856 34 H 0.176 0.824 35 H 0.163 0.837 36 H 0.155 0.845 37 H 0.389 0.611 38 H -0.285 1.285 39 H -0.290 1.290 40 H 0.166 0.834 41 H 0.165 0.835 42 H 0.411 0.589 43 H 0.090 0.910 44 H 0.089 0.911 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.243 -1.860 -1.711 2.816 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.402 5.402 2 C 0.309 3.691 3 O -0.474 6.474 4 C -0.150 4.150 5 H 0.165 0.835 6 C -0.166 4.166 7 C 0.018 3.982 8 H 0.134 0.866 9 N -0.361 5.361 10 C 0.348 3.652 11 O -0.433 6.433 12 C -0.184 4.184 13 C -0.072 4.072 14 C -0.043 4.043 15 C -0.027 4.027 16 C -0.207 4.207 17 C -0.198 4.198 18 C -0.105 4.105 19 C -0.141 4.141 20 O -0.343 6.343 21 Si 0.665 3.335 22 O -0.073 6.073 23 C -0.062 4.062 24 C -0.164 4.164 25 C 0.119 3.881 26 O -0.307 6.307 27 C -0.163 4.163 28 H 0.249 0.751 29 H 0.236 0.764 30 H 0.101 0.899 31 H 0.114 0.886 32 H 0.246 0.754 33 H 0.161 0.839 34 H 0.193 0.807 35 H 0.181 0.819 36 H 0.172 0.828 37 H 0.239 0.761 38 H -0.212 1.212 39 H -0.217 1.217 40 H 0.183 0.817 41 H 0.183 0.817 42 H 0.272 0.728 43 H 0.109 0.891 44 H 0.108 0.892 Dipole moment (debyes) X Y Z Total from point charges -0.963 -1.387 -0.510 1.764 hybrid contribution -1.351 0.450 -1.507 2.073 sum -2.314 -0.937 -2.017 3.210 Atomic orbital electron populations 1.43823 1.06516 1.13763 1.76062 1.20786 0.83359 0.91044 0.73941 1.90741 1.69401 1.35300 1.51941 1.22602 0.96264 0.94971 1.01198 0.83522 1.23354 0.97128 1.01168 0.94958 1.22538 0.87359 1.00317 0.88031 0.86594 1.45897 1.43801 1.09098 1.37295 1.18247 0.80574 0.84612 0.81774 1.90795 1.61997 1.24949 1.65569 1.20279 1.02396 0.94242 1.01483 1.21389 0.94887 0.95904 0.95029 1.17712 0.99616 0.88405 0.98519 1.20473 1.00002 0.84367 0.97869 1.22163 1.01398 0.96430 1.00735 1.21799 1.02147 0.94657 1.01183 1.23020 0.99185 0.90086 0.98225 1.24429 1.07590 0.84450 0.97640 1.86640 1.40116 1.60291 1.47281 0.93697 0.78582 0.79097 0.82158 1.83916 1.56207 1.13953 1.53247 1.21421 0.97154 0.89656 0.97978 1.21585 0.98963 0.98944 0.96933 1.18861 0.93562 0.84009 0.91640 1.84705 1.53346 1.27106 1.65528 1.23246 0.94081 0.98373 1.00602 0.75051 0.76448 0.89925 0.88576 0.75410 0.83861 0.80665 0.81897 0.82774 0.76072 1.21206 1.21690 0.81663 0.81728 0.72848 0.89088 0.89219 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.84 4.68 8.87 -173.53 -1.54 3.14 16 2 C 0.52 0.65 7.63 87.66 0.67 1.32 16 3 O -0.59 -6.70 16.74 -3.04 -0.05 -6.75 16 4 C -0.13 0.53 4.15 -11.01 -0.05 0.48 16 5 H 0.15 -1.36 8.14 -2.39 -0.02 -1.38 16 6 C -0.13 0.47 7.43 31.12 0.23 0.70 16 7 C 0.12 -0.13 4.24 45.51 0.19 0.07 16 8 H 0.12 0.10 7.46 -2.39 -0.02 0.09 16 9 N -0.71 -0.45 5.30 -443.17 -2.35 -2.80 16 10 C 0.56 3.24 7.76 86.71 0.67 3.91 16 11 O -0.55 -6.72 14.74 17.03 0.25 -6.47 16 12 C -0.18 -0.58 5.88 -20.04 -0.12 -0.70 16 13 C -0.05 -0.02 9.20 22.79 0.21 0.19 16 14 C -0.04 0.02 5.87 -20.13 -0.12 -0.10 16 15 C 0.02 0.02 7.03 24.27 0.17 0.19 16 16 C -0.19 0.20 10.26 22.41 0.23 0.43 16 17 C -0.18 -0.01 10.78 22.13 0.24 0.22 16 18 C -0.06 -0.04 6.20 24.88 0.15 0.12 16 19 C -0.03 0.04 2.98 71.24 0.21 0.26 16 20 O -0.53 -0.55 12.88 -148.98 -1.92 -2.46 16 21 Si 0.76 -0.30 32.11 68.60 2.20 1.90 16 22 O -0.18 -0.36 8.80 -6.52 -0.06 -0.41 16 23 C -0.04 0.17 9.54 22.55 0.22 0.38 16 24 C -0.15 0.36 9.96 22.30 0.22 0.58 16 25 C 0.17 0.43 6.72 22.89 0.15 0.58 16 26 O -0.49 -2.16 11.55 -68.66 -0.79 -2.95 16 27 C -0.12 0.21 7.15 31.12 0.22 0.44 16 28 H 0.42 -4.96 8.83 -92.71 -0.82 -5.78 16 29 H 0.40 -2.35 8.93 -92.70 -0.83 -3.17 16 30 H 0.08 -0.15 8.09 -2.38 -0.02 -0.17 16 31 H 0.10 -0.55 8.14 -2.39 -0.02 -0.57 16 32 H 0.41 -1.07 6.75 -92.71 -0.63 -1.70 16 33 H 0.14 -0.35 6.24 -2.91 -0.02 -0.37 16 34 H 0.18 -1.12 7.25 -2.91 -0.02 -1.14 16 35 H 0.16 -0.37 8.06 -2.91 -0.02 -0.39 16 36 H 0.15 -0.76 7.96 -2.38 -0.02 -0.78 16 37 H 0.39 -1.54 8.70 -74.05 -0.64 -2.18 16 38 H -0.29 -1.64 7.11 99.48 0.71 -0.93 16 39 H -0.29 -1.58 7.11 99.48 0.71 -0.87 16 40 H 0.17 -1.54 6.96 -2.91 -0.02 -1.56 16 41 H 0.17 -1.11 8.06 -2.91 -0.02 -1.14 16 42 H 0.41 -1.21 9.06 -74.06 -0.67 -1.88 16 43 H 0.09 -0.27 8.14 -2.38 -0.02 -0.29 16 44 H 0.09 0.11 7.41 -2.39 -0.02 0.09 16 Total: 0.00 -28.70 382.18 -3.16 -31.86 By element: Atomic # 1 Polarization: -21.72 SS G_CDS: -2.41 Total: -24.13 kcal Atomic # 6 Polarization: 5.57 SS G_CDS: 3.51 Total: 9.08 kcal Atomic # 7 Polarization: 4.23 SS G_CDS: -3.89 Total: 0.34 kcal Atomic # 8 Polarization: -16.48 SS G_CDS: -2.57 Total: -19.05 kcal Atomic # 14 Polarization: -0.30 SS G_CDS: 2.20 Total: 1.90 kcal Total: -28.70 -3.16 -31.86 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_11684966_13259648.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -44.461 kcal (2) G-P(sol) polarization free energy of solvation -28.704 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -73.165 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.156 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -31.860 kcal (6) G-S(sol) free energy of system = (1) + (5) -76.321 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.98 seconds