Wall clock time and date at job start Tue Mar 9 2021 12:56:49 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.34768 * 1 3 3 O 1.21276 * 120.00407 * 2 1 4 4 C 1.50705 * 119.99694 * 179.97438 * 2 1 3 5 5 H 1.08997 * 112.85340 * 311.19915 * 4 2 1 6 6 C 1.53958 * 113.74205 * 82.40257 * 4 2 1 7 7 C 1.53780 * 87.02152 * 139.94061 * 6 4 2 8 8 H 1.09002 * 113.61437 * 89.22959 * 7 6 4 9 9 N 1.46494 * 113.61665 * 220.04787 * 7 6 4 10 10 C 1.34779 * 120.00232 * 254.13779 * 9 7 6 11 11 O 1.21555 * 119.99894 * 359.97438 * 10 9 7 12 12 C 1.47837 * 120.00283 * 180.02562 * 10 9 7 13 13 C 1.39983 * 120.56367 * 179.97438 * 12 10 9 14 14 C 1.38397 * 118.28990 * 179.97438 * 13 12 10 15 15 C 1.50706 * 120.34396 * 179.97438 * 14 13 12 16 16 O 1.42895 * 109.47147 * 299.99881 * 15 14 13 17 17 Si 1.86299 * 109.46748 * 180.02562 * 15 14 13 18 18 C 1.38306 * 119.30520 * 0.25276 * 14 13 12 19 19 N 1.31951 * 121.07853 * 359.49895 * 18 14 13 20 20 C 1.31661 * 121.88513 * 0.49068 * 19 18 14 21 21 C 1.53780 * 87.17480 * 334.64073 * 7 6 4 22 22 H 0.97002 * 120.00428 * 179.97438 * 1 2 3 23 23 H 0.96997 * 119.99926 * 359.97438 * 1 2 3 24 24 H 1.09003 * 113.61360 * 25.42743 * 6 4 2 25 25 H 1.08996 * 113.66847 * 254.47514 * 6 4 2 26 26 H 0.97001 * 120.00235 * 74.14236 * 9 7 6 27 27 H 1.08003 * 120.85228 * 359.95577 * 13 12 10 28 28 H 1.09001 * 109.46740 * 60.00280 * 15 14 13 29 29 H 0.96695 * 114.00385 * 300.00674 * 16 15 14 30 30 H 1.48504 * 109.99999 * 180.02562 * 17 15 14 31 31 H 1.48504 * 110.00212 * 301.31915 * 17 15 14 32 32 H 1.08000 * 119.45740 * 179.74614 * 18 14 13 33 33 H 1.08004 * 119.72051 * 179.75535 * 20 19 18 34 34 H 1.08998 * 113.61860 * 139.93799 * 21 7 6 35 35 H 1.08996 * 113.61263 * 270.75817 * 21 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.3477 0.0000 0.0000 3 8 1.9541 1.0502 0.0000 4 6 2.1011 -1.3052 0.0006 5 1 1.7398 -2.0022 0.7566 6 6 2.2497 -1.9358 -1.3960 7 6 3.6825 -2.3136 -0.9850 8 1 3.7550 -3.2863 -0.4983 9 7 4.6659 -2.1391 -2.0567 10 6 5.1678 -3.2162 -2.6927 11 8 4.8049 -4.3324 -2.3767 12 6 6.1606 -3.0401 -3.7739 13 6 6.6900 -4.1506 -4.4419 14 6 7.6159 -3.9314 -5.4469 15 6 8.2159 -5.0934 -6.1959 16 8 8.9037 -5.9469 -5.2793 17 14 9.4160 -4.4570 -7.4709 18 6 7.9891 -2.6352 -5.7527 19 7 7.4697 -1.6071 -5.1090 20 6 6.5856 -1.7639 -4.1461 21 6 3.6295 -1.1342 0.0005 22 1 -0.4851 -0.8400 -0.0004 23 1 -0.4850 0.8400 0.0004 24 1 2.2056 -1.2112 -2.2092 25 1 1.6008 -2.7963 -1.5589 26 1 4.9559 -1.2484 -2.3086 27 1 6.3839 -5.1525 -4.1796 28 1 7.4234 -5.6549 -6.6907 29 1 9.6238 -5.5126 -4.8020 30 1 10.0143 -5.5932 -8.2170 31 1 8.7203 -3.5425 -8.4116 32 1 8.7145 -2.4616 -6.5337 33 1 6.1860 -0.8977 -3.6398 34 1 4.0929 -1.3486 0.9635 35 1 3.9645 -0.1905 -0.4297 There are 50 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 50 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_11684966_13287814.mol2 35 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:56:49 Heat of formation + Delta-G solvation = -46.722217 kcal Electronic energy + Delta-G solvation = -20798.127581 eV Core-core repulsion = 17377.224207 eV Total energy + Delta-G solvation = -3420.903375 eV No. of doubly occupied orbitals = 50 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 278.110 amu Computer time = 0.47 seconds Orbital eigenvalues (eV) -42.03219 -41.34691 -40.19240 -38.47817 -37.93404 -34.93462 -34.53319 -33.76670 -32.86182 -27.67278 -27.26359 -26.76483 -25.47761 -23.86395 -22.31990 -21.68160 -20.56501 -19.18154 -18.72066 -18.05759 -17.93127 -17.76762 -17.58490 -16.61345 -16.47389 -16.38396 -16.12369 -15.81088 -15.33708 -15.20172 -14.63886 -14.44112 -14.38741 -14.21339 -13.56218 -13.49790 -13.41786 -12.72773 -12.47008 -12.24915 -12.16253 -11.72405 -11.43620 -11.10432 -10.96000 -10.67555 -10.62400 -10.58774 -10.33140 -10.11847 -5.02124 -0.59337 -0.04437 1.22768 1.55524 1.60680 1.64045 1.90254 1.98176 2.61058 2.65870 3.08830 3.36253 3.37263 3.41820 3.44645 3.64870 3.69504 3.72427 3.75056 3.86693 4.10027 4.22334 4.27094 4.45626 4.53339 4.65354 4.70615 4.81970 4.87392 4.90371 4.97008 5.08002 5.30430 5.44938 5.86937 6.32757 6.45095 6.62990 6.70445 6.99337 7.32404 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.839 5.839 2 C 0.524 3.476 3 O -0.593 6.593 4 C -0.130 4.130 5 H 0.145 0.855 6 C -0.128 4.128 7 C 0.121 3.879 8 H 0.115 0.885 9 N -0.701 5.701 10 C 0.567 3.433 11 O -0.570 6.570 12 C -0.197 4.197 13 C 0.000 4.000 14 C -0.176 4.176 15 C -0.072 4.072 16 O -0.554 6.554 17 Si 0.783 3.217 18 C 0.129 3.871 19 N -0.495 5.495 20 C 0.145 3.855 21 C -0.121 4.121 22 H 0.418 0.582 23 H 0.405 0.595 24 H 0.086 0.914 25 H 0.093 0.907 26 H 0.414 0.586 27 H 0.139 0.861 28 H 0.113 0.887 29 H 0.397 0.603 30 H -0.295 1.295 31 H -0.276 1.276 32 H 0.184 0.816 33 H 0.188 0.812 34 H 0.091 0.909 35 H 0.093 0.907 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.731 1.108 0.846 1.574 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.402 5.402 2 C 0.309 3.691 3 O -0.473 6.473 4 C -0.152 4.152 5 H 0.163 0.837 6 C -0.167 4.167 7 C 0.016 3.984 8 H 0.133 0.867 9 N -0.352 5.352 10 C 0.355 3.645 11 O -0.450 6.450 12 C -0.203 4.203 13 C -0.027 4.027 14 C -0.178 4.178 15 C -0.182 4.182 16 O -0.362 6.362 17 Si 0.687 3.313 18 C -0.027 4.027 19 N -0.202 5.202 20 C -0.013 4.013 21 C -0.160 4.160 22 H 0.249 0.751 23 H 0.236 0.764 24 H 0.105 0.895 25 H 0.112 0.888 26 H 0.252 0.748 27 H 0.156 0.844 28 H 0.130 0.870 29 H 0.247 0.753 30 H -0.222 1.222 31 H -0.203 1.203 32 H 0.200 0.800 33 H 0.205 0.795 34 H 0.109 0.891 35 H 0.111 0.889 Dipole moment (debyes) X Y Z Total from point charges -0.436 1.352 -0.194 1.434 hybrid contribution -1.412 -0.771 0.288 1.634 sum -1.848 0.581 0.094 1.940 Atomic orbital electron populations 1.43830 1.06575 1.13762 1.76043 1.20761 0.83326 0.91022 0.73946 1.90742 1.69370 1.35280 1.51948 1.22632 0.96410 0.94938 1.01176 0.83697 1.23401 0.97031 1.01182 0.95124 1.22571 0.87349 1.00437 0.88004 0.86683 1.45820 1.43628 1.09167 1.36585 1.18197 0.80394 0.84571 0.81381 1.90791 1.61832 1.25731 1.66693 1.21015 1.02306 0.96086 1.00851 1.21645 0.90749 0.99388 0.90915 1.21457 0.99857 0.97116 0.99368 1.25229 1.01984 0.92122 0.98893 1.86504 1.51692 1.39228 1.58747 0.93722 0.81822 0.79064 0.76679 1.23226 0.95869 0.87212 0.96395 1.67794 1.10052 1.34738 1.07637 1.23420 0.90663 0.95754 0.91479 1.23227 0.93933 0.98285 1.00530 0.75096 0.76435 0.89523 0.88849 0.74780 0.84354 0.86998 0.75291 1.22230 1.20305 0.80001 0.79542 0.89054 0.88858 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.84 5.39 8.87 -173.54 -1.54 3.85 16 2 C 0.52 0.03 7.64 87.66 0.67 0.70 16 3 O -0.59 -5.93 16.74 -3.02 -0.05 -5.98 16 4 C -0.13 0.71 4.14 -10.95 -0.05 0.66 16 5 H 0.15 -1.49 8.14 -2.39 -0.02 -1.51 16 6 C -0.13 0.66 7.45 31.18 0.23 0.89 16 7 C 0.12 -0.37 4.21 45.52 0.19 -0.18 16 8 H 0.12 -0.11 7.50 -2.39 -0.02 -0.12 16 9 N -0.70 1.65 5.32 -442.92 -2.35 -0.70 16 10 C 0.57 2.11 7.78 86.78 0.68 2.78 16 11 O -0.57 -6.57 16.04 -3.89 -0.06 -6.63 16 12 C -0.20 -0.32 5.89 -19.99 -0.12 -0.44 16 13 C 0.00 0.00 9.31 22.73 0.21 0.21 16 14 C -0.18 0.14 5.39 -19.81 -0.11 0.03 16 15 C -0.07 0.15 2.83 71.24 0.20 0.35 16 16 O -0.55 0.42 12.78 -148.98 -1.90 -1.48 16 17 Si 0.78 -3.72 29.82 68.60 2.05 -1.68 16 18 C 0.13 -0.22 9.84 84.69 0.83 0.62 16 19 N -0.49 -0.39 10.35 -194.76 -2.01 -2.40 16 20 C 0.15 -0.22 10.71 85.04 0.91 0.69 16 21 C -0.12 0.46 7.15 31.12 0.22 0.68 16 22 H 0.42 -5.23 8.83 -92.71 -0.82 -6.05 16 23 H 0.40 -2.67 8.93 -92.71 -0.83 -3.50 16 24 H 0.09 -0.33 8.10 -2.39 -0.02 -0.35 16 25 H 0.09 -0.60 8.14 -2.39 -0.02 -0.61 16 26 H 0.41 -2.96 6.78 -92.71 -0.63 -3.59 16 27 H 0.14 0.73 7.74 -2.91 -0.02 0.70 16 28 H 0.11 -0.10 7.96 -2.39 -0.02 -0.12 16 29 H 0.40 -3.59 8.70 -74.06 -0.64 -4.23 16 30 H -0.29 -0.89 7.11 99.48 0.71 -0.19 16 31 H -0.28 0.21 7.11 99.48 0.71 0.92 16 32 H 0.18 -1.23 4.88 -2.91 -0.01 -1.25 16 33 H 0.19 -1.50 6.42 -2.91 -0.02 -1.52 16 34 H 0.09 -0.44 8.14 -2.39 -0.02 -0.46 16 35 H 0.09 -0.12 7.41 -2.39 -0.02 -0.14 16 Total: 0.00 -26.35 304.14 -3.69 -30.04 By element: Atomic # 1 Polarization: -20.32 SS G_CDS: -1.69 Total: -22.02 kcal Atomic # 6 Polarization: 3.12 SS G_CDS: 3.88 Total: 7.00 kcal Atomic # 7 Polarization: 6.65 SS G_CDS: -5.91 Total: 0.74 kcal Atomic # 8 Polarization: -12.08 SS G_CDS: -2.02 Total: -14.09 kcal Atomic # 14 Polarization: -3.72 SS G_CDS: 2.05 Total: -1.68 kcal Total: -26.35 -3.69 -30.04 kcal The number of atoms in the molecule is 35 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_11684966_13287814.mol2 35 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -16.678 kcal (2) G-P(sol) polarization free energy of solvation -26.352 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -43.029 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.693 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -30.045 kcal (6) G-S(sol) free energy of system = (1) + (5) -46.722 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.47 seconds