Wall clock time and date at job start Tue Mar 9 2021 12:56:57 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50706 * 1 3 3 C 1.37779 * 119.84708 * 2 1 4 4 C 1.39713 * 119.90806 * 180.02562 * 3 2 1 5 5 C 1.47538 * 120.18848 * 180.02562 * 4 3 2 6 6 O 1.21590 * 119.99296 * 180.02562 * 5 4 3 7 7 N 1.34776 * 120.00364 * 359.97438 * 5 4 3 8 8 C 1.46502 * 119.99579 * 180.02562 * 7 5 4 9 9 H 1.08989 * 112.85392 * 25.33569 * 8 7 5 10 10 C 1.53782 * 113.60995 * 156.53426 * 8 7 5 11 11 C 1.53776 * 87.08368 * 139.97930 * 10 8 7 12 12 H 1.09000 * 113.61789 * 89.19359 * 11 10 8 13 13 C 1.50699 * 113.61422 * 220.01746 * 11 10 8 14 14 N 1.34778 * 120.00381 * 179.97438 * 13 11 10 15 15 O 1.21286 * 120.00063 * 359.97438 * 13 11 10 16 16 C 1.53779 * 113.61054 * 254.13260 * 8 7 5 17 17 C 1.40139 * 119.61533 * 359.75371 * 4 3 2 18 18 O 1.35652 * 120.15077 * 180.24314 * 17 4 3 19 19 C 1.38707 * 119.69755 * 0.54357 * 17 4 3 20 20 C 1.50702 * 119.95715 * 179.71123 * 19 17 4 21 21 O 1.42892 * 109.47242 * 74.72118 * 20 19 17 22 22 Si 1.86298 * 109.46915 * 194.72656 * 20 19 17 23 23 C 1.38060 * 120.08555 * 359.43070 * 19 17 4 24 24 H 1.08994 * 109.46905 * 269.97237 * 1 2 3 25 25 H 1.08999 * 109.47411 * 29.97689 * 1 2 3 26 26 H 1.09005 * 109.47059 * 149.97589 * 1 2 3 27 27 H 1.08008 * 120.04991 * 0.02947 * 3 2 1 28 28 H 0.96988 * 119.99836 * 0.02562 * 7 5 4 29 29 H 1.09003 * 113.61009 * 254.52719 * 10 8 7 30 30 H 1.09001 * 113.61897 * 25.42802 * 10 8 7 31 31 H 0.97009 * 119.99587 * 359.97438 * 14 13 11 32 32 H 0.97000 * 120.00419 * 179.97438 * 14 13 11 33 33 H 1.09001 * 113.61708 * 334.57533 * 16 8 7 34 34 H 1.09005 * 113.61130 * 105.47672 * 16 8 7 35 35 H 0.96696 * 114.00135 * 270.30100 * 18 17 4 36 36 H 1.09000 * 109.46724 * 314.72163 * 20 19 17 37 37 H 0.96703 * 114.00176 * 180.02562 * 21 20 19 38 38 H 1.48506 * 109.99834 * 178.68053 * 22 20 19 39 39 H 1.48502 * 110.00011 * 299.99318 * 22 20 19 40 40 H 1.07994 * 119.80593 * 180.27918 * 23 19 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5071 0.0000 0.0000 3 6 2.1928 1.1950 0.0000 4 6 3.5899 1.1965 -0.0005 5 6 4.3304 2.4726 0.0000 6 8 5.5463 2.4697 -0.0009 7 7 3.6592 3.6413 0.0005 8 6 4.3947 4.9083 0.0005 9 1 5.3921 4.8188 -0.4296 10 6 3.5859 6.0900 -0.5600 11 6 4.2020 6.9422 0.5620 12 1 5.1467 7.4107 0.2859 13 6 3.2306 7.9089 1.1887 14 7 3.6353 8.7194 2.1865 15 8 2.0844 7.9575 0.7951 16 6 4.3713 5.6341 1.3561 17 6 4.2837 -0.0210 0.0042 18 8 5.6402 -0.0323 0.0087 19 6 3.5771 -1.2146 -0.0021 20 6 4.3174 -2.5273 -0.0037 21 8 4.8560 -2.7720 1.2970 22 14 3.1442 -3.9012 -0.4587 23 6 2.1966 -1.2017 -0.0011 24 1 -0.3633 -0.0005 1.0276 25 1 -0.3634 0.8902 -0.5135 26 1 -0.3633 -0.8898 -0.5142 27 1 1.6510 2.1294 0.0005 28 1 2.6893 3.6435 0.0009 29 1 3.8946 6.3953 -1.5598 30 1 2.5071 5.9629 -0.4694 31 1 4.5520 8.6803 2.5016 32 1 3.0101 9.3419 2.5897 33 1 3.5077 5.3820 1.9715 34 1 5.3133 5.5718 1.9010 35 1 6.0365 -0.0326 -0.8734 36 1 5.1283 -2.4862 -0.7309 37 1 5.3471 -3.6019 1.3696 38 1 3.8690 -5.1968 -0.4949 39 1 2.0339 -3.9677 0.5252 40 1 1.6510 -2.1337 -0.0015 There are 56 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 56 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_11684966_13422088.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:56:57 Heat of formation + Delta-G solvation = -101.200534 kcal Electronic energy + Delta-G solvation = -25100.116093 eV Core-core repulsion = 21268.056461 eV Total energy + Delta-G solvation = -3832.059632 eV No. of doubly occupied orbitals = 56 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 307.130 amu Computer time = 0.70 seconds Orbital eigenvalues (eV) -41.90167 -41.24723 -39.97693 -38.45428 -38.03958 -37.70369 -34.83087 -34.49298 -33.17251 -32.60298 -27.65757 -27.38478 -26.78425 -26.74333 -24.97555 -22.28769 -21.80115 -21.50183 -20.50130 -19.54394 -18.62185 -18.60005 -18.26864 -17.89203 -17.47357 -16.80129 -16.48551 -16.36629 -15.98799 -15.97857 -15.42143 -15.33028 -15.14262 -14.86554 -14.45589 -14.36374 -14.07844 -13.76336 -13.56734 -13.41149 -13.09877 -13.00443 -12.66641 -12.42868 -12.39863 -12.25618 -11.85888 -11.72887 -11.70590 -11.01663 -10.86835 -10.67880 -10.47126 -10.26188 -10.01108 -9.51269 -4.96114 -0.36110 0.06579 1.24075 1.55336 1.57042 1.69134 1.90260 2.03053 2.52565 2.66407 3.14087 3.32561 3.36337 3.41252 3.56996 3.64953 3.73069 3.82042 3.85913 4.08707 4.15089 4.21928 4.31660 4.48219 4.55964 4.62488 4.64901 4.70191 4.80340 4.86998 4.87740 4.96377 4.97280 5.10537 5.18456 5.22572 5.41105 5.48801 5.66677 5.86456 6.42540 6.44911 6.55782 6.74948 7.12595 7.31527 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.118 4.118 2 C -0.096 4.096 3 C -0.062 4.062 4 C -0.182 4.182 5 C 0.560 3.440 6 O -0.560 6.560 7 N -0.706 5.706 8 C 0.122 3.878 9 H 0.113 0.887 10 C -0.119 4.119 11 C -0.129 4.129 12 H 0.145 0.855 13 C 0.524 3.476 14 N -0.839 5.839 15 O -0.592 6.592 16 C -0.130 4.130 17 C 0.167 3.833 18 O -0.489 6.489 19 C -0.119 4.119 20 C -0.086 4.086 21 O -0.557 6.557 22 Si 0.779 3.221 23 C -0.080 4.080 24 H 0.077 0.923 25 H 0.086 0.914 26 H 0.083 0.917 27 H 0.158 0.842 28 H 0.411 0.589 29 H 0.092 0.908 30 H 0.092 0.908 31 H 0.418 0.582 32 H 0.405 0.595 33 H 0.084 0.916 34 H 0.090 0.910 35 H 0.403 0.597 36 H 0.086 0.914 37 H 0.393 0.607 38 H -0.287 1.287 39 H -0.287 1.287 40 H 0.149 0.851 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.010 0.476 -2.913 3.570 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.174 4.174 2 C -0.096 4.096 3 C -0.080 4.080 4 C -0.186 4.186 5 C 0.348 3.652 6 O -0.439 6.439 7 N -0.358 5.358 8 C 0.018 3.982 9 H 0.131 0.869 10 C -0.158 4.158 11 C -0.151 4.151 12 H 0.163 0.837 13 C 0.310 3.690 14 N -0.402 5.402 15 O -0.473 6.473 16 C -0.170 4.170 17 C 0.120 3.880 18 O -0.301 6.301 19 C -0.120 4.120 20 C -0.193 4.193 21 O -0.367 6.367 22 Si 0.683 3.317 23 C -0.098 4.098 24 H 0.096 0.904 25 H 0.105 0.895 26 H 0.102 0.898 27 H 0.175 0.825 28 H 0.249 0.751 29 H 0.110 0.890 30 H 0.111 0.889 31 H 0.249 0.751 32 H 0.236 0.764 33 H 0.102 0.898 34 H 0.108 0.892 35 H 0.262 0.738 36 H 0.104 0.896 37 H 0.243 0.757 38 H -0.214 1.214 39 H -0.214 1.214 40 H 0.166 0.834 Dipole moment (debyes) X Y Z Total from point charges -2.494 0.225 -2.324 3.417 hybrid contribution 1.058 0.005 0.939 1.415 sum -1.436 0.230 -1.384 2.008 Atomic orbital electron populations 1.20923 0.88083 1.04890 1.03511 1.20093 0.98116 0.91711 0.99687 1.21420 0.91205 0.99702 0.95722 1.20433 0.94969 0.92770 1.10421 1.18265 0.86934 0.84249 0.75757 1.90793 1.14639 1.87882 1.50575 1.45819 1.10743 1.04695 1.74497 1.22516 0.97479 0.81147 0.97107 0.86884 1.23211 1.00851 0.92840 0.98865 1.22626 1.00182 0.93871 0.98372 0.83692 1.20749 0.88116 0.80747 0.79397 1.43828 1.17590 1.40975 1.37804 1.90738 1.21897 1.70637 1.64012 1.23403 1.03730 0.92674 0.97152 1.18501 0.83625 0.90659 0.95185 1.84755 1.15061 1.96039 1.34247 1.19798 0.94088 0.93581 1.04537 1.25047 1.04464 1.01923 0.87915 1.86596 1.73906 1.45638 1.30542 0.94150 0.76731 0.73485 0.87350 1.21366 0.92416 0.99597 0.96394 0.90442 0.89491 0.89775 0.82480 0.75062 0.88959 0.88935 0.75115 0.76401 0.89789 0.89184 0.73751 0.89576 0.75741 1.21361 1.21390 0.83357 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 0.81 10.00 71.24 0.71 1.52 16 2 C -0.10 0.15 5.87 -19.90 -0.12 0.04 16 3 C -0.06 0.06 9.18 22.52 0.21 0.26 16 4 C -0.18 -0.94 5.89 -20.01 -0.12 -1.06 16 5 C 0.56 3.99 7.76 86.70 0.67 4.66 16 6 O -0.56 -8.07 14.78 16.92 0.25 -7.82 16 7 N -0.71 -0.30 5.31 -443.21 -2.35 -2.66 16 8 C 0.12 -0.10 4.21 45.52 0.19 0.09 16 9 H 0.11 0.15 7.50 -2.39 -0.02 0.13 16 10 C -0.12 0.29 7.15 31.12 0.22 0.52 16 11 C -0.13 0.51 4.15 -10.96 -0.05 0.47 16 12 H 0.15 -1.30 8.14 -2.39 -0.02 -1.32 16 13 C 0.52 0.57 7.63 87.66 0.67 1.24 16 14 N -0.84 4.58 8.87 -173.53 -1.54 3.04 16 15 O -0.59 -6.36 16.74 -3.05 -0.05 -6.41 16 16 C -0.13 0.35 7.44 31.18 0.23 0.59 16 17 C 0.17 1.25 6.69 22.84 0.15 1.40 16 18 O -0.49 -4.69 10.91 -68.76 -0.75 -5.45 16 19 C -0.12 -0.50 5.30 -19.79 -0.10 -0.60 16 20 C -0.09 -0.14 2.36 71.24 0.17 0.03 16 21 O -0.56 -3.46 12.86 -148.98 -1.92 -5.38 16 22 Si 0.78 -1.92 30.19 68.60 2.07 0.15 16 23 C -0.08 -0.04 8.30 22.30 0.19 0.14 16 24 H 0.08 -0.52 8.14 -2.39 -0.02 -0.54 16 25 H 0.09 -0.82 8.08 -2.39 -0.02 -0.84 16 26 H 0.08 -0.73 8.08 -2.38 -0.02 -0.75 16 27 H 0.16 -1.12 6.41 -2.91 -0.02 -1.14 16 28 H 0.41 -1.78 6.74 -92.72 -0.63 -2.41 16 29 H 0.09 -0.36 8.14 -2.39 -0.02 -0.38 16 30 H 0.09 -0.01 7.40 -2.39 -0.02 -0.02 16 31 H 0.42 -4.77 8.83 -92.70 -0.82 -5.59 16 32 H 0.41 -2.37 8.93 -92.71 -0.83 -3.19 16 33 H 0.08 -0.09 8.10 -2.39 -0.02 -0.11 16 34 H 0.09 -0.32 8.14 -2.38 -0.02 -0.34 16 35 H 0.40 0.75 9.06 -74.06 -0.67 0.08 16 36 H 0.09 -0.13 7.83 -2.39 -0.02 -0.15 16 37 H 0.39 -0.84 8.74 -74.06 -0.65 -1.49 16 38 H -0.29 -0.56 7.11 99.48 0.71 0.15 16 39 H -0.29 -0.84 6.74 99.48 0.67 -0.16 16 40 H 0.15 -0.41 4.87 -2.91 -0.01 -0.42 16 Total: 0.00 -30.03 338.61 -3.69 -33.72 By element: Atomic # 1 Polarization: -16.06 SS G_CDS: -2.43 Total: -18.50 kcal Atomic # 6 Polarization: 6.25 SS G_CDS: 3.03 Total: 9.28 kcal Atomic # 7 Polarization: 4.28 SS G_CDS: -3.89 Total: 0.38 kcal Atomic # 8 Polarization: -22.58 SS G_CDS: -2.47 Total: -25.05 kcal Atomic # 14 Polarization: -1.92 SS G_CDS: 2.07 Total: 0.15 kcal Total: -30.03 -3.69 -33.72 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_11684966_13422088.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -67.476 kcal (2) G-P(sol) polarization free energy of solvation -30.030 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -97.506 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.695 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.725 kcal (6) G-S(sol) free energy of system = (1) + (5) -101.201 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.70 seconds