Wall clock time and date at job start Tue Mar 9 2021 12:57:00 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46894 * 1 3 3 C 1.46900 * 110.99797 * 2 1 4 4 C 1.39045 * 111.00183 * 123.95819 * 2 1 3 5 5 C 1.39200 * 119.93507 * 120.00226 * 4 2 1 6 6 C 1.50698 * 119.95995 * 359.97438 * 5 4 2 7 7 O 1.42905 * 109.47321 * 75.00311 * 6 5 4 8 8 Si 1.86299 * 109.46871 * 195.00011 * 6 5 4 9 9 C 1.37618 * 120.07119 * 180.27146 * 5 4 2 10 10 C 1.39780 * 119.93181 * 359.45648 * 9 5 4 11 11 C 1.47517 * 120.07304 * 180.24662 * 10 9 5 12 12 O 1.21597 * 119.99910 * 0.31648 * 11 10 9 13 13 N 1.34773 * 120.00433 * 180.31592 * 11 10 9 14 14 C 1.46499 * 120.00621 * 180.02562 * 13 11 10 15 15 H 1.09008 * 112.84699 * 336.19903 * 14 13 11 16 16 C 1.53779 * 113.61614 * 107.50040 * 14 13 11 17 17 C 1.53774 * 87.08335 * 139.98649 * 16 14 13 18 18 H 1.08995 * 113.61666 * 89.11112 * 17 16 14 19 19 C 1.50699 * 113.69351 * 220.01328 * 17 16 14 20 20 N 1.34776 * 119.99523 * 277.53214 * 19 17 16 21 21 O 1.21277 * 120.00668 * 97.52732 * 19 17 16 22 22 C 1.53776 * 113.62051 * 205.00039 * 14 13 11 23 23 C 1.39818 * 119.85947 * 0.56325 * 10 9 5 24 24 C 1.37595 * 119.92953 * 359.70624 * 23 10 9 25 25 H 1.09000 * 109.47023 * 296.04315 * 1 2 3 26 26 H 1.09006 * 109.47735 * 56.04392 * 1 2 3 27 27 H 1.09005 * 109.47197 * 176.04600 * 1 2 3 28 28 H 1.09007 * 109.47271 * 183.95639 * 3 2 1 29 29 H 1.09001 * 109.47358 * 303.95561 * 3 2 1 30 30 H 1.08997 * 109.47137 * 63.95470 * 3 2 1 31 31 H 1.09001 * 109.47612 * 315.00579 * 6 5 4 32 32 H 0.96696 * 114.00036 * 299.99741 * 7 6 5 33 33 H 1.48504 * 109.99999 * 60.00368 * 8 6 5 34 34 H 1.48504 * 110.00212 * 181.32086 * 8 6 5 35 35 H 1.08003 * 120.03548 * 179.72338 * 9 5 4 36 36 H 0.97007 * 120.00025 * 359.97438 * 13 11 10 37 37 H 1.09005 * 113.61665 * 254.53713 * 16 14 13 38 38 H 1.09000 * 113.61279 * 25.43482 * 16 14 13 39 39 H 0.97007 * 120.00310 * 359.97438 * 20 19 17 40 40 H 0.97000 * 119.99668 * 179.97438 * 20 19 17 41 41 H 1.09002 * 113.61260 * 334.56656 * 22 14 13 42 42 H 1.09001 * 113.61534 * 105.38264 * 22 14 13 43 43 H 1.07998 * 120.03553 * 179.69057 * 23 10 9 44 44 H 1.07998 * 119.96100 * 179.97438 * 24 23 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4689 0.0000 0.0000 3 6 1.9953 1.3714 0.0000 4 6 1.9673 -0.7251 1.0767 5 6 2.7794 -1.8331 0.8517 6 6 3.1166 -2.2452 -0.5580 7 8 4.0855 -1.3446 -1.0988 8 14 3.8116 -3.9737 -0.5502 9 6 3.2695 -2.5560 1.9152 10 6 2.9605 -2.1701 3.2226 11 6 3.4887 -2.9396 4.3649 12 8 4.1985 -3.9074 4.1698 13 7 3.1847 -2.5700 5.6248 14 6 3.7097 -3.3339 6.7593 15 1 3.9635 -4.3610 6.4969 16 6 4.8183 -2.6023 7.5343 17 6 4.1710 -3.1465 8.8187 18 1 4.5520 -4.1223 9.1200 19 6 4.1450 -2.1530 9.9515 20 7 5.2345 -1.9871 10.7274 21 8 3.1438 -1.5028 10.1651 22 6 2.8524 -3.2167 8.0306 23 6 2.1442 -1.0570 3.4453 24 6 1.6527 -0.3415 2.3777 25 1 -0.3633 0.4512 0.9233 26 1 -0.3635 0.5740 -0.8524 27 1 -0.3634 -1.0253 -0.0709 28 1 3.0827 1.3433 -0.0709 29 1 1.5897 1.9164 -0.8524 30 1 1.7043 1.8723 0.9233 31 1 2.2149 -2.2188 -1.1699 32 1 3.7909 -0.4243 -1.1333 33 1 2.8135 -4.9199 0.0098 34 1 4.1779 -4.3801 -1.9308 35 1 3.8959 -3.4182 1.7398 36 1 2.6188 -1.7977 5.7805 37 1 5.8165 -2.9983 7.3468 38 1 4.7691 -1.5170 7.4466 39 1 6.0353 -2.5074 10.5568 40 1 5.2179 -1.3474 11.4563 41 1 2.2657 -2.2993 8.0785 42 1 2.2622 -4.1082 8.2428 43 1 1.8996 -0.7592 4.4542 44 1 1.0218 0.5181 2.5491 There are 59 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 59 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_11684966_13422196.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:57:00 Heat of formation + Delta-G solvation = -42.722637 kcal Electronic energy + Delta-G solvation = -26881.493008 eV Core-core repulsion = 22994.150211 eV Total energy + Delta-G solvation = -3887.342797 eV No. of doubly occupied orbitals = 59 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 320.157 amu Computer time = 0.79 seconds Orbital eigenvalues (eV) -41.88246 -41.31854 -40.29017 -38.52408 -37.69033 -37.28963 -34.83202 -34.46202 -32.72438 -31.32062 -28.60633 -27.57110 -26.93295 -26.73185 -25.80666 -23.46927 -22.98420 -22.04879 -21.29462 -20.48789 -19.07191 -18.63586 -18.00722 -17.82142 -17.77264 -17.25767 -16.51393 -16.42008 -16.32798 -16.08601 -15.93004 -15.46342 -15.29067 -15.21997 -15.14163 -14.64129 -14.35044 -14.18688 -13.95483 -13.63657 -13.50621 -13.39042 -13.09982 -12.99000 -12.73996 -12.63977 -12.41898 -12.21860 -12.19104 -11.69139 -11.40581 -11.27890 -11.05475 -10.90158 -10.66191 -10.19373 -10.10392 -9.79883 -9.64277 -4.91971 -0.42033 0.13721 1.33348 1.54158 1.57837 1.66254 1.87062 2.02577 2.60972 2.67892 2.71545 3.38336 3.43600 3.50975 3.62149 3.69886 3.75639 3.88609 3.89867 4.01460 4.10495 4.18210 4.26093 4.33340 4.39307 4.42906 4.55647 4.56324 4.63892 4.67656 4.73340 4.74514 4.91354 4.92039 4.95994 4.98552 5.00746 5.09855 5.15061 5.19928 5.47132 5.53981 5.74281 5.88122 6.17975 6.42631 6.46729 6.62816 7.09747 7.33618 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.025 3.975 2 N -0.528 5.528 3 C 0.023 3.977 4 C 0.125 3.875 5 C -0.112 4.112 6 C -0.059 4.059 7 O -0.544 6.544 8 Si 0.776 3.224 9 C -0.057 4.057 10 C -0.147 4.147 11 C 0.560 3.440 12 O -0.569 6.569 13 N -0.704 5.704 14 C 0.121 3.879 15 H 0.116 0.884 16 C -0.127 4.127 17 C -0.130 4.130 18 H 0.145 0.855 19 C 0.524 3.476 20 N -0.839 5.839 21 O -0.594 6.594 22 C -0.123 4.123 23 C -0.061 4.061 24 C -0.153 4.153 25 H 0.044 0.956 26 H 0.087 0.913 27 H 0.063 0.937 28 H 0.074 0.926 29 H 0.088 0.912 30 H 0.042 0.958 31 H 0.079 0.921 32 H 0.373 0.627 33 H -0.274 1.274 34 H -0.286 1.286 35 H 0.140 0.860 36 H 0.412 0.588 37 H 0.095 0.905 38 H 0.086 0.914 39 H 0.418 0.582 40 H 0.405 0.595 41 H 0.091 0.909 42 H 0.088 0.912 43 H 0.157 0.843 44 H 0.149 0.851 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.600 3.497 3.336 4.870 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.121 4.121 2 N -0.249 5.249 3 C -0.123 4.123 4 C 0.030 3.970 5 C -0.114 4.114 6 C -0.169 4.169 7 O -0.351 6.351 8 Si 0.679 3.321 9 C -0.076 4.076 10 C -0.150 4.150 11 C 0.349 3.651 12 O -0.449 6.449 13 N -0.355 5.355 14 C 0.016 3.984 15 H 0.134 0.866 16 C -0.166 4.166 17 C -0.152 4.152 18 H 0.163 0.837 19 C 0.310 3.690 20 N -0.402 5.402 21 O -0.475 6.475 22 C -0.162 4.162 23 C -0.080 4.080 24 C -0.173 4.173 25 H 0.063 0.937 26 H 0.106 0.894 27 H 0.081 0.919 28 H 0.092 0.908 29 H 0.107 0.893 30 H 0.060 0.940 31 H 0.097 0.903 32 H 0.222 0.778 33 H -0.199 1.199 34 H -0.213 1.213 35 H 0.157 0.843 36 H 0.250 0.750 37 H 0.113 0.887 38 H 0.105 0.895 39 H 0.249 0.751 40 H 0.236 0.764 41 H 0.109 0.891 42 H 0.107 0.893 43 H 0.174 0.826 44 H 0.167 0.833 Dipole moment (debyes) X Y Z Total from point charges 0.798 1.573 2.419 2.993 hybrid contribution -1.438 1.812 0.636 2.399 sum -0.640 3.385 3.054 4.604 Atomic orbital electron populations 1.22526 0.84461 1.02792 1.02354 1.59461 1.09770 1.15395 1.40299 1.22596 1.01230 0.86102 1.02385 1.18969 0.94553 0.93548 0.89882 1.20198 0.98983 0.96226 0.95981 1.25185 0.96172 1.04921 0.90606 1.86695 1.41730 1.21777 1.84879 0.92258 0.87440 0.71064 0.81333 1.21080 0.96855 0.98450 0.91219 1.19906 1.03152 0.98877 0.93040 1.18345 0.79653 0.83454 0.83656 1.90787 1.39124 1.29106 1.85862 1.45819 1.52283 1.32768 1.04611 1.22557 0.95039 0.97150 0.83659 0.86607 1.23360 0.99903 1.01206 0.92102 1.22599 1.00241 1.00140 0.92186 0.83704 1.20770 0.82485 0.82731 0.83034 1.43830 1.16240 1.45305 1.34793 1.90737 1.34378 1.49861 1.72516 1.23234 0.96038 1.04259 0.92624 1.21442 0.93630 0.92300 1.00618 1.21808 1.01773 1.01481 0.92214 0.93746 0.89406 0.91858 0.90751 0.89304 0.93959 0.90312 0.77764 1.19948 1.21339 0.84295 0.74960 0.88660 0.89542 0.75056 0.76447 0.89081 0.89316 0.82584 0.83302 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.10 9.34 127.69 1.19 1.09 16 2 N -0.53 1.11 3.70 -745.10 -2.76 -1.65 16 3 C 0.02 -0.12 9.09 127.69 1.16 1.04 16 4 C 0.13 0.02 4.66 38.47 0.18 0.20 16 5 C -0.11 -0.38 5.28 -19.78 -0.10 -0.48 16 6 C -0.06 -0.26 2.29 71.24 0.16 -0.09 16 7 O -0.54 -2.75 12.65 -148.98 -1.89 -4.64 16 8 Si 0.78 4.05 30.16 68.60 2.07 6.12 16 9 C -0.06 -0.26 8.19 22.50 0.18 -0.07 16 10 C -0.15 -0.33 5.88 -20.08 -0.12 -0.45 16 11 C 0.56 2.38 7.76 86.69 0.67 3.05 16 12 O -0.57 -6.48 15.94 -4.02 -0.06 -6.55 16 13 N -0.70 1.28 5.30 -443.22 -2.35 -1.07 16 14 C 0.12 -0.33 4.24 45.52 0.19 -0.13 16 15 H 0.12 -0.07 7.46 -2.38 -0.02 -0.08 16 16 C -0.13 0.66 7.43 31.12 0.23 0.89 16 17 C -0.13 0.69 4.14 -11.02 -0.05 0.65 16 18 H 0.15 -1.47 8.14 -2.39 -0.02 -1.49 16 19 C 0.52 0.01 7.63 87.66 0.67 0.68 16 20 N -0.84 5.50 8.87 -173.54 -1.54 3.97 16 21 O -0.59 -5.94 16.74 -3.02 -0.05 -5.99 16 22 C -0.12 0.41 7.16 31.12 0.22 0.63 16 23 C -0.06 0.19 9.53 22.50 0.21 0.40 16 24 C -0.15 0.45 8.53 22.36 0.19 0.64 16 25 H 0.04 -0.26 7.09 -2.39 -0.02 -0.27 16 26 H 0.09 -0.52 8.12 -2.38 -0.02 -0.54 16 27 H 0.06 -0.14 8.14 -2.38 -0.02 -0.16 16 28 H 0.07 -0.40 7.41 -2.38 -0.02 -0.41 16 29 H 0.09 -0.64 8.12 -2.39 -0.02 -0.66 16 30 H 0.04 -0.27 7.32 -2.39 -0.02 -0.29 16 31 H 0.08 0.34 7.78 -2.39 -0.02 0.33 16 32 H 0.37 0.25 7.48 -74.06 -0.55 -0.30 16 33 H -0.27 -2.38 7.11 99.48 0.71 -1.67 16 34 H -0.29 -3.04 7.11 99.48 0.71 -2.33 16 35 H 0.14 0.70 4.69 -2.91 -0.01 0.69 16 36 H 0.41 -2.67 6.75 -92.70 -0.63 -3.30 16 37 H 0.09 -0.64 8.14 -2.38 -0.02 -0.66 16 38 H 0.09 -0.34 8.10 -2.39 -0.02 -0.36 16 39 H 0.42 -5.31 8.83 -92.70 -0.82 -6.13 16 40 H 0.40 -2.74 8.93 -92.71 -0.83 -3.57 16 41 H 0.09 -0.07 7.41 -2.39 -0.02 -0.09 16 42 H 0.09 -0.37 8.14 -2.39 -0.02 -0.39 16 43 H 0.16 -1.44 6.39 -2.91 -0.02 -1.46 16 44 H 0.15 -1.02 6.99 -2.91 -0.02 -1.04 16 Total: 0.00 -22.70 360.16 -3.28 -25.98 By element: Atomic # 1 Polarization: -22.50 SS G_CDS: -1.71 Total: -24.20 kcal Atomic # 6 Polarization: 3.03 SS G_CDS: 5.01 Total: 8.04 kcal Atomic # 7 Polarization: 7.89 SS G_CDS: -6.65 Total: 1.24 kcal Atomic # 8 Polarization: -15.17 SS G_CDS: -2.00 Total: -17.17 kcal Atomic # 14 Polarization: 4.05 SS G_CDS: 2.07 Total: 6.12 kcal Total: -22.70 -3.28 -25.98 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_11684966_13422196.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -16.747 kcal (2) G-P(sol) polarization free energy of solvation -22.696 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -39.443 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.280 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.975 kcal (6) G-S(sol) free energy of system = (1) + (5) -42.723 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.79 seconds