Wall clock time and date at job start Tue Mar 9 2021 12:57:12 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.34772 * 1 3 3 O 1.21277 * 120.00382 * 2 1 4 4 C 1.50707 * 119.99924 * 180.02562 * 2 1 3 5 5 H 1.09009 * 112.84528 * 311.18981 * 4 2 1 6 6 C 1.53775 * 113.69427 * 82.45878 * 4 2 1 7 7 C 1.53783 * 87.08159 * 139.99062 * 6 4 2 8 8 H 1.09005 * 113.68294 * 89.13053 * 7 6 4 9 9 N 1.46499 * 113.61727 * 220.01642 * 7 6 4 10 10 C 1.34765 * 120.00213 * 252.50179 * 9 7 6 11 11 O 1.21276 * 120.00381 * 359.97438 * 10 9 7 12 12 C 1.50704 * 120.00209 * 180.02562 * 10 9 7 13 13 C 1.53544 * 109.82204 * 79.99673 * 12 10 9 14 14 C 1.53040 * 108.71532 * 180.58301 * 13 12 10 15 15 C 1.50202 * 110.31915 * 310.33948 * 14 13 12 16 16 C 1.50698 * 118.54500 * 200.05123 * 15 14 13 17 17 O 1.42911 * 109.47174 * 69.99854 * 16 15 14 18 18 Si 1.86296 * 109.47017 * 189.99592 * 16 15 14 19 19 C 1.31109 * 122.90620 * 20.02329 * 15 14 13 20 20 N 1.38928 * 121.85141 * 359.62663 * 19 15 14 21 21 C 1.53777 * 113.61427 * 180.02562 * 4 2 1 22 22 H 0.97000 * 120.00097 * 180.02562 * 1 2 3 23 23 H 0.97001 * 120.00158 * 359.97438 * 1 2 3 24 24 H 1.09006 * 113.61410 * 25.44346 * 6 4 2 25 25 H 1.08996 * 113.61739 * 254.54303 * 6 4 2 26 26 H 0.96999 * 119.99640 * 72.50166 * 9 7 6 27 27 H 1.09006 * 109.86009 * 319.10479 * 12 10 9 28 28 H 1.09002 * 109.62230 * 60.76907 * 13 12 10 29 29 H 1.09001 * 109.62032 * 300.39833 * 13 12 10 30 30 H 1.09009 * 109.32921 * 70.59616 * 14 13 12 31 31 H 1.08999 * 109.33057 * 190.07149 * 14 13 12 32 32 H 1.08999 * 109.47595 * 309.99821 * 16 15 14 33 33 H 0.96700 * 113.99787 * 59.99277 * 17 16 15 34 34 H 1.48496 * 110.00111 * 58.68072 * 18 16 15 35 35 H 1.48507 * 110.00060 * 180.02562 * 18 16 15 36 36 H 1.08001 * 119.07506 * 179.59525 * 19 15 14 37 37 H 0.96994 * 120.55932 * 193.29643 * 20 19 15 38 38 H 1.09003 * 113.62045 * 105.38262 * 21 4 2 39 39 H 1.09003 * 113.61357 * 334.47292 * 21 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.3477 0.0000 0.0000 3 8 1.9542 1.0503 0.0000 4 6 2.1012 -1.3052 -0.0006 5 1 1.7399 -2.0028 0.7551 6 6 2.2502 -1.9321 -1.3968 7 6 3.6826 -2.3128 -0.9868 8 1 3.7550 -3.2859 -0.5010 9 7 4.6660 -2.1375 -2.0585 10 6 5.1909 -3.2151 -2.6744 11 8 4.8495 -4.3302 -2.3412 12 6 6.2029 -3.0348 -3.7764 13 6 7.5873 -2.7598 -3.1720 14 6 8.5908 -2.5666 -4.3112 15 6 8.4749 -3.6875 -5.3042 16 6 9.6336 -3.9515 -6.2308 17 8 10.7277 -4.4884 -5.4844 18 14 9.1165 -5.1722 -7.5397 19 6 7.4103 -4.4468 -5.4001 20 7 6.3066 -4.2695 -4.5752 21 6 3.6295 -1.1342 0.0001 22 1 -0.4850 -0.8400 0.0004 23 1 -0.4850 0.8400 0.0004 24 1 2.2067 -1.2058 -2.2085 25 1 1.6001 -2.7914 -1.5612 26 1 4.9393 -1.2457 -2.3248 27 1 5.9079 -2.2042 -4.4178 28 1 7.8920 -3.6053 -2.5553 29 1 7.5477 -1.8573 -2.5621 30 1 8.3905 -1.6191 -4.8117 31 1 9.6013 -2.5493 -3.9029 32 1 9.9400 -3.0189 -6.7045 33 1 10.5264 -5.3206 -5.0349 34 1 7.9590 -4.6393 -8.3022 35 1 10.2508 -5.4415 -8.4597 36 1 7.3907 -5.2319 -6.1415 37 1 5.6147 -4.9474 -4.5248 38 1 4.0926 -1.3495 0.9631 39 1 3.9633 -0.1896 -0.4295 There are 52 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 52 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_11684966_15413834.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:57:12 Heat of formation + Delta-G solvation = -68.965766 kcal Electronic energy + Delta-G solvation = -22098.922606 eV Core-core repulsion = 18622.431721 eV Total energy + Delta-G solvation = -3476.490884 eV No. of doubly occupied orbitals = 52 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 282.141 amu Computer time = 0.53 seconds Orbital eigenvalues (eV) -41.75214 -40.93276 -39.57363 -38.44607 -37.28175 -34.82781 -34.46770 -33.16366 -32.79950 -28.15772 -26.76330 -26.64827 -25.34446 -23.72404 -22.35310 -21.66089 -20.56870 -19.35857 -18.99493 -18.56133 -17.98837 -17.85872 -17.08028 -16.66247 -16.40881 -16.17243 -15.89101 -15.76202 -15.30772 -15.27447 -15.12352 -14.58258 -14.30294 -14.13936 -13.92977 -13.53733 -13.36466 -13.09908 -12.94602 -12.43620 -12.24776 -12.19983 -11.89623 -11.83917 -11.70989 -11.28048 -11.00813 -10.82497 -10.67770 -10.17274 -10.12459 -8.43935 -4.98083 1.34681 1.41446 1.45949 1.57759 1.64142 1.88661 2.01164 2.58729 2.71674 3.37026 3.41973 3.55751 3.70818 3.74040 3.79771 3.87143 3.89389 4.06568 4.24666 4.34301 4.45471 4.52870 4.59549 4.63641 4.66074 4.71699 4.79240 4.88559 4.97197 5.04339 5.11768 5.20816 5.31404 5.47987 5.59108 5.86453 6.24665 6.43714 6.45675 6.84878 6.93239 7.08229 7.32109 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.839 5.839 2 C 0.523 3.477 3 O -0.594 6.594 4 C -0.131 4.131 5 H 0.144 0.856 6 C -0.126 4.126 7 C 0.123 3.877 8 H 0.114 0.886 9 N -0.704 5.704 10 C 0.518 3.482 11 O -0.567 6.567 12 C 0.136 3.864 13 C -0.119 4.119 14 C -0.054 4.054 15 C -0.293 4.293 16 C -0.049 4.049 17 O -0.565 6.565 18 Si 0.757 3.243 19 C 0.147 3.853 20 N -0.737 5.737 21 C -0.123 4.123 22 H 0.418 0.582 23 H 0.405 0.595 24 H 0.086 0.914 25 H 0.093 0.907 26 H 0.416 0.584 27 H 0.106 0.894 28 H 0.062 0.938 29 H 0.095 0.905 30 H 0.067 0.933 31 H 0.069 0.931 32 H 0.092 0.908 33 H 0.391 0.609 34 H -0.289 1.289 35 H -0.308 1.308 36 H 0.149 0.851 37 H 0.409 0.591 38 H 0.088 0.912 39 H 0.091 0.909 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.395 -1.802 1.688 5.933 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.402 5.402 2 C 0.309 3.691 3 O -0.475 6.475 4 C -0.153 4.153 5 H 0.162 0.838 6 C -0.165 4.165 7 C 0.018 3.982 8 H 0.132 0.868 9 N -0.355 5.355 10 C 0.304 3.696 11 O -0.446 6.446 12 C 0.027 3.973 13 C -0.157 4.157 14 C -0.091 4.091 15 C -0.304 4.304 16 C -0.160 4.160 17 O -0.372 6.372 18 Si 0.665 3.335 19 C 0.026 3.974 20 N -0.369 5.369 21 C -0.162 4.162 22 H 0.249 0.751 23 H 0.235 0.765 24 H 0.104 0.896 25 H 0.112 0.888 26 H 0.253 0.747 27 H 0.124 0.876 28 H 0.081 0.919 29 H 0.113 0.887 30 H 0.086 0.914 31 H 0.088 0.912 32 H 0.110 0.890 33 H 0.240 0.760 34 H -0.216 1.216 35 H -0.237 1.237 36 H 0.166 0.834 37 H 0.246 0.754 38 H 0.106 0.894 39 H 0.109 0.891 Dipole moment (debyes) X Y Z Total from point charges -4.941 -1.538 0.924 5.257 hybrid contribution -0.483 0.874 -0.049 0.999 sum -5.424 -0.664 0.875 5.534 Atomic orbital electron populations 1.43832 1.06568 1.13763 1.76033 1.20793 0.83332 0.91062 0.73919 1.90743 1.69395 1.35344 1.51995 1.22610 0.96412 0.94900 1.01347 0.83798 1.23349 0.97128 1.01141 0.94925 1.22503 0.87460 1.00093 0.88140 0.86821 1.45866 1.43259 1.09421 1.36987 1.20773 0.81160 0.84602 0.83074 1.90712 1.62410 1.25715 1.65768 1.21154 0.94879 0.89823 0.91487 1.21798 0.92593 1.03166 0.98186 1.19940 0.99039 0.96399 0.93769 1.20955 0.96442 1.06588 1.06385 1.24774 0.88192 1.03293 0.99767 1.86433 1.37117 1.44228 1.69438 0.94247 0.76248 0.85576 0.77401 1.20488 0.86445 0.97897 0.92557 1.44445 1.24514 1.21419 1.46562 1.23238 0.93910 0.98472 1.00547 0.75073 0.76456 0.89589 0.88797 0.74731 0.87647 0.91919 0.88665 0.91428 0.91200 0.89021 0.75972 1.21600 1.23659 0.83427 0.75402 0.89365 0.89088 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.84 5.73 8.87 -173.54 -1.54 4.19 16 2 C 0.52 -0.15 7.63 87.66 0.67 0.52 16 3 O -0.59 -5.87 16.74 -3.02 -0.05 -5.92 16 4 C -0.13 0.78 4.14 -11.01 -0.05 0.74 16 5 H 0.14 -1.54 8.14 -2.38 -0.02 -1.56 16 6 C -0.13 0.80 7.43 31.12 0.23 1.03 16 7 C 0.12 -0.54 4.24 45.53 0.19 -0.35 16 8 H 0.11 -0.24 7.46 -2.38 -0.02 -0.26 16 9 N -0.70 3.22 5.35 -439.98 -2.36 0.86 16 10 C 0.52 -0.03 7.10 87.66 0.62 0.59 16 11 O -0.57 -4.16 15.69 -3.02 -0.05 -4.21 16 12 C 0.14 -0.34 3.38 44.25 0.15 -0.19 16 13 C -0.12 0.30 5.46 30.79 0.17 0.46 16 14 C -0.05 0.03 5.85 29.71 0.17 0.20 16 15 C -0.29 -0.01 5.37 -16.75 -0.09 -0.10 16 16 C -0.05 -0.05 2.81 71.24 0.20 0.15 16 17 O -0.56 -1.42 12.88 -148.98 -1.92 -3.34 16 18 Si 0.76 -0.46 29.72 68.60 2.04 1.58 16 19 C 0.15 -0.23 9.62 83.42 0.80 0.57 16 20 N -0.74 0.70 5.48 -328.17 -1.80 -1.10 16 21 C -0.12 0.52 7.16 31.13 0.22 0.74 16 22 H 0.42 -5.45 8.83 -92.71 -0.82 -6.27 16 23 H 0.40 -2.81 8.93 -92.71 -0.83 -3.63 16 24 H 0.09 -0.42 8.10 -2.38 -0.02 -0.44 16 25 H 0.09 -0.73 8.14 -2.39 -0.02 -0.75 16 26 H 0.42 -3.59 8.73 -92.71 -0.81 -4.40 16 27 H 0.11 -0.58 8.14 -2.38 -0.02 -0.60 16 28 H 0.06 0.07 8.14 -2.39 -0.02 0.05 16 29 H 0.09 -0.57 8.14 -2.39 -0.02 -0.59 16 30 H 0.07 -0.10 8.14 -2.38 -0.02 -0.12 16 31 H 0.07 0.11 8.14 -2.39 -0.02 0.09 16 32 H 0.09 0.28 7.96 -2.39 -0.02 0.26 16 33 H 0.39 -2.04 8.70 -74.06 -0.64 -2.69 16 34 H -0.29 -1.17 7.11 99.48 0.71 -0.46 16 35 H -0.31 -2.40 7.11 99.48 0.71 -1.69 16 36 H 0.15 -0.83 4.48 -2.91 -0.01 -0.84 16 37 H 0.41 -0.32 8.11 -92.71 -0.75 -1.07 16 38 H 0.09 -0.43 8.14 -2.39 -0.02 -0.45 16 39 H 0.09 -0.12 7.41 -2.39 -0.02 -0.14 16 Total: 0.00 -24.10 323.00 -5.06 -29.15 By element: Atomic # 1 Polarization: -22.90 SS G_CDS: -2.68 Total: -25.58 kcal Atomic # 6 Polarization: 1.07 SS G_CDS: 3.30 Total: 4.36 kcal Atomic # 7 Polarization: 9.64 SS G_CDS: -5.70 Total: 3.95 kcal Atomic # 8 Polarization: -11.45 SS G_CDS: -2.02 Total: -13.47 kcal Atomic # 14 Polarization: -0.46 SS G_CDS: 2.04 Total: 1.58 kcal Total: -24.10 -5.06 -29.15 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_11684966_15413834.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -39.812 kcal (2) G-P(sol) polarization free energy of solvation -24.098 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -63.910 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.056 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -29.154 kcal (6) G-S(sol) free energy of system = (1) + (5) -68.966 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.53 seconds