Wall clock time and date at job start Tue Mar 9 2021 12:57:15 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.34779 * 1 3 3 O 1.21283 * 119.99592 * 2 1 4 4 C 1.50703 * 119.99818 * 179.97438 * 2 1 3 5 5 H 1.08998 * 112.84777 * 48.80152 * 4 2 1 6 6 C 1.53782 * 113.61174 * 179.97438 * 4 2 1 7 7 C 1.53782 * 87.07971 * 140.06242 * 6 4 2 8 8 H 1.09007 * 113.60849 * 89.20125 * 7 6 4 9 9 N 1.46493 * 113.61718 * 220.01525 * 7 6 4 10 10 C 1.34774 * 120.00420 * 205.00591 * 9 7 6 11 11 O 1.21288 * 119.99779 * 359.97438 * 10 9 7 12 12 C 1.50699 * 120.00239 * 180.02562 * 10 9 7 13 13 C 1.53040 * 109.32951 * 180.85848 * 12 10 9 14 14 C 1.53545 * 108.56229 * 190.16671 * 13 12 10 15 15 N 1.47036 * 107.65472 * 60.94980 * 14 13 12 16 16 C 1.38922 * 118.88685 * 316.33572 * 15 14 13 17 17 C 1.31120 * 121.84663 * 13.31393 * 16 15 14 18 18 C 1.50694 * 118.54550 * 179.61817 * 17 16 15 19 19 O 1.42901 * 109.47191 * 250.00150 * 18 17 16 20 20 Si 1.86303 * 109.47305 * 10.00183 * 18 17 16 21 21 C 1.53776 * 87.08161 * 334.56576 * 7 6 4 22 22 H 0.96998 * 120.00020 * 180.02562 * 1 2 3 23 23 H 0.97002 * 120.00138 * 359.97438 * 1 2 3 24 24 H 1.09000 * 113.61653 * 25.52027 * 6 4 2 25 25 H 1.09000 * 113.61447 * 254.61694 * 6 4 2 26 26 H 0.97006 * 119.99924 * 25.00357 * 9 7 6 27 27 H 1.08998 * 109.18710 * 300.42889 * 12 10 9 28 28 H 1.08998 * 109.62312 * 70.44555 * 13 12 10 29 29 H 1.09000 * 109.62380 * 309.88871 * 13 12 10 30 30 H 1.09003 * 109.82071 * 301.41205 * 14 13 12 31 31 H 1.08996 * 109.81898 * 180.48803 * 14 13 12 32 32 H 0.97002 * 120.55356 * 136.31809 * 15 14 13 33 33 H 1.07993 * 119.07552 * 193.34122 * 16 15 14 34 34 H 1.09001 * 109.47097 * 130.00249 * 18 17 16 35 35 H 0.96704 * 114.00245 * 179.97438 * 19 18 17 36 36 H 1.48510 * 109.99941 * 300.00221 * 20 18 17 37 37 H 1.48500 * 109.99909 * 61.31871 * 20 18 17 38 38 H 1.09004 * 113.61424 * 139.97806 * 21 7 6 39 39 H 1.08997 * 113.61779 * 270.87819 * 21 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.3478 0.0000 0.0000 3 8 1.9541 1.0504 0.0000 4 6 2.1013 -1.3052 0.0006 5 1 1.7399 -2.0028 -0.7549 6 6 3.6295 -1.1341 -0.0001 7 6 3.6831 -2.3124 0.9866 8 1 3.7554 -3.2856 0.5009 9 7 4.6669 -2.1368 2.0577 10 6 5.1921 -3.2143 2.6737 11 8 4.8500 -4.3295 2.3415 12 6 6.2038 -3.0335 3.7759 13 6 6.6500 -4.4064 4.2841 14 6 7.4757 -4.2093 5.5636 15 7 6.6082 -3.5621 6.5589 16 6 5.7971 -2.5079 6.1579 17 6 5.5867 -2.2396 4.8918 18 6 4.6863 -1.0834 4.5407 19 8 3.4682 -1.5805 3.9829 20 14 4.3098 -0.1004 6.0778 21 6 2.2509 -1.9316 1.3970 22 1 -0.4850 -0.8400 0.0004 23 1 -0.4850 0.8401 0.0004 24 1 3.9634 -0.1896 0.4294 25 1 4.0926 -1.3495 -0.9631 26 1 4.9403 -1.2448 2.3236 27 1 7.0672 -2.4954 3.3850 28 1 7.2609 -4.8965 3.5261 29 1 5.7746 -5.0176 4.5040 30 1 8.3360 -3.5736 5.3540 31 1 7.8119 -5.1757 5.9390 32 1 6.6022 -3.8663 7.4799 33 1 5.3271 -1.8918 6.9101 34 1 5.1845 -0.4429 3.8128 35 1 2.8391 -0.8898 3.7333 36 1 3.6304 -0.9624 7.0783 37 1 5.5654 0.4488 6.6498 38 1 1.6008 -2.7909 1.5620 39 1 2.2077 -1.2051 2.2085 There are 52 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 52 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_22_11684966_15608500.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:57:15 Heat of formation + Delta-G solvation = -38.214737 kcal Electronic energy + Delta-G solvation = -23618.459842 eV Core-core repulsion = 20143.302423 eV Total energy + Delta-G solvation = -3475.157420 eV No. of doubly occupied orbitals = 52 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 282.141 amu Computer time = 0.46 seconds Orbital eigenvalues (eV) -41.71914 -40.85820 -39.24576 -38.23551 -37.54552 -34.62393 -34.17354 -33.23819 -32.86025 -27.79835 -27.01721 -26.67041 -25.51871 -23.19676 -22.26564 -21.50051 -20.54317 -19.26260 -18.79203 -18.56464 -18.21233 -17.83705 -17.68935 -16.73399 -16.32538 -16.28948 -15.67518 -15.39688 -15.21094 -15.06884 -14.71611 -14.66184 -14.18756 -13.80800 -13.62643 -13.46464 -13.26841 -13.08805 -12.97460 -12.40291 -12.26604 -12.04239 -11.92262 -11.67747 -11.58783 -11.35470 -10.82683 -10.65705 -10.45678 -10.22598 -9.58225 -8.55153 -4.97002 1.15723 1.29259 1.60914 1.65146 1.90933 2.07117 2.35990 2.46957 2.70435 3.39433 3.45851 3.51176 3.69231 3.70861 3.87450 3.93276 3.99258 4.14264 4.18725 4.22979 4.36797 4.38430 4.54300 4.59495 4.71701 4.73454 4.78434 4.80258 4.96188 5.00236 5.15448 5.29422 5.32205 5.38251 5.78616 5.81402 6.19400 6.35449 6.62323 6.71434 6.81653 7.30247 7.58162 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.855 5.855 2 C 0.529 3.471 3 O -0.543 6.543 4 C -0.143 4.143 5 H 0.117 0.883 6 C -0.126 4.126 7 C 0.129 3.871 8 H 0.114 0.886 9 N -0.698 5.698 10 C 0.542 3.458 11 O -0.549 6.549 12 C -0.042 4.042 13 C -0.119 4.119 14 C 0.119 3.881 15 N -0.748 5.748 16 C 0.150 3.850 17 C -0.234 4.234 18 C -0.052 4.052 19 O -0.535 6.535 20 Si 0.667 3.333 21 C -0.124 4.124 22 H 0.403 0.597 23 H 0.401 0.599 24 H 0.099 0.901 25 H 0.079 0.921 26 H 0.398 0.602 27 H 0.093 0.907 28 H 0.081 0.919 29 H 0.081 0.919 30 H 0.062 0.938 31 H 0.084 0.916 32 H 0.403 0.597 33 H 0.125 0.875 34 H 0.061 0.939 35 H 0.368 0.632 36 H -0.253 1.253 37 H -0.257 1.257 38 H 0.079 0.921 39 H 0.092 0.908 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.424 1.654 0.962 2.385 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.418 5.418 2 C 0.314 3.686 3 O -0.419 6.419 4 C -0.165 4.165 5 H 0.135 0.865 6 C -0.164 4.164 7 C 0.024 3.976 8 H 0.132 0.868 9 N -0.350 5.350 10 C 0.329 3.671 11 O -0.426 6.426 12 C -0.063 4.063 13 C -0.157 4.157 14 C -0.006 4.006 15 N -0.378 5.378 16 C 0.028 3.972 17 C -0.244 4.244 18 C -0.164 4.164 19 O -0.342 6.342 20 Si 0.569 3.431 21 C -0.163 4.163 22 H 0.231 0.769 23 H 0.232 0.768 24 H 0.118 0.882 25 H 0.098 0.902 26 H 0.236 0.764 27 H 0.111 0.889 28 H 0.100 0.900 29 H 0.100 0.900 30 H 0.080 0.920 31 H 0.102 0.898 32 H 0.238 0.762 33 H 0.141 0.859 34 H 0.079 0.921 35 H 0.216 0.784 36 H -0.179 1.179 37 H -0.182 1.182 38 H 0.098 0.902 39 H 0.110 0.890 Dipole moment (debyes) X Y Z Total from point charges -0.568 0.897 1.590 1.912 hybrid contribution -0.175 0.009 0.227 0.286 sum -0.743 0.907 1.816 2.162 Atomic orbital electron populations 1.43915 1.07340 1.12643 1.77865 1.20421 0.82536 0.91052 0.74608 1.90756 1.68263 1.33504 1.49400 1.22626 0.97099 0.95596 1.01172 0.86548 1.23278 0.93165 0.99494 1.00478 1.22307 0.87611 0.99593 0.88112 0.86763 1.45930 1.43285 1.09174 1.36601 1.20163 0.81031 0.84379 0.81566 1.90673 1.62053 1.24665 1.65250 1.19732 0.96830 0.96964 0.92819 1.21715 1.01311 0.95649 0.97072 1.21684 0.92299 0.97667 0.88901 1.44555 1.45712 1.35491 1.12029 1.20274 0.92557 0.89510 0.94886 1.19648 1.08774 1.03268 0.92732 1.24375 0.87143 0.98275 1.06650 1.86817 1.27098 1.36558 1.83681 0.95266 0.85194 0.84911 0.77730 1.23420 0.98044 1.00774 0.94096 0.76905 0.76799 0.88214 0.90230 0.76398 0.88924 0.90002 0.90021 0.91963 0.89753 0.76232 0.85864 0.92086 0.78352 1.17876 1.18203 0.90189 0.88959 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.85 2.56 8.87 31.22 0.28 2.84 16 2 C 0.53 0.00 7.63 -10.98 -0.08 -0.09 16 3 O -0.54 -2.31 16.74 5.56 0.09 -2.21 16 4 C -0.14 0.27 4.15 -90.96 -0.38 -0.11 16 5 H 0.12 -0.39 8.14 -51.93 -0.42 -0.81 16 6 C -0.13 0.12 7.16 -25.92 -0.19 -0.06 16 7 C 0.13 -0.03 4.24 -67.12 -0.28 -0.31 16 8 H 0.11 0.16 7.47 -51.93 -0.39 -0.22 16 9 N -0.70 -0.23 3.17 -53.02 -0.17 -0.40 16 10 C 0.54 1.76 6.36 -10.99 -0.07 1.69 16 11 O -0.55 -3.90 15.40 5.55 0.09 -3.82 16 12 C -0.04 -0.06 2.74 -93.14 -0.26 -0.32 16 13 C -0.12 -0.17 4.91 -26.43 -0.13 -0.30 16 14 C 0.12 -0.07 7.16 -3.47 -0.02 -0.10 16 15 N -0.75 -0.05 5.83 -60.68 -0.35 -0.41 16 16 C 0.15 0.19 9.62 -16.08 -0.15 0.04 16 17 C -0.23 -0.28 5.18 -101.34 -0.52 -0.81 16 18 C -0.05 0.05 1.73 36.00 0.06 0.11 16 19 O -0.53 0.35 8.27 -35.23 -0.29 0.06 16 20 Si 0.67 -0.88 29.91 -169.99 -5.08 -5.96 16 21 C -0.12 0.22 6.82 -25.92 -0.18 0.04 16 22 H 0.40 -2.22 8.83 -40.82 -0.36 -2.58 16 23 H 0.40 -1.33 8.93 -40.82 -0.36 -1.70 16 24 H 0.10 -0.02 7.41 -51.93 -0.38 -0.41 16 25 H 0.08 -0.09 8.14 -51.93 -0.42 -0.51 16 26 H 0.40 -0.54 5.68 -40.82 -0.23 -0.77 16 27 H 0.09 0.00 8.14 -51.93 -0.42 -0.42 16 28 H 0.08 0.08 8.14 -51.93 -0.42 -0.34 16 29 H 0.08 0.32 7.75 -51.93 -0.40 -0.08 16 30 H 0.06 -0.07 8.14 -51.93 -0.42 -0.49 16 31 H 0.08 -0.18 8.14 -51.93 -0.42 -0.60 16 32 H 0.40 -0.69 8.96 -40.82 -0.37 -1.06 16 33 H 0.12 0.12 4.34 -52.49 -0.23 -0.11 16 34 H 0.06 -0.17 6.39 -51.93 -0.33 -0.50 16 35 H 0.37 -1.46 6.62 45.56 0.30 -1.16 16 36 H -0.25 -0.45 6.89 56.52 0.39 -0.06 16 37 H -0.26 -0.33 7.11 56.52 0.40 0.07 16 38 H 0.08 -0.11 8.14 -51.93 -0.42 -0.54 16 39 H 0.09 -0.23 5.22 -51.93 -0.27 -0.50 16 LS Contribution 304.46 15.07 4.59 4.59 Total: 0.00 -10.07 304.46 -8.25 -18.32 By element: Atomic # 1 Polarization: -7.60 SS G_CDS: -5.20 Total: -12.79 kcal Atomic # 6 Polarization: 2.00 SS G_CDS: -2.20 Total: -0.21 kcal Atomic # 7 Polarization: 2.27 SS G_CDS: -0.24 Total: 2.03 kcal Atomic # 8 Polarization: -5.86 SS G_CDS: -0.11 Total: -5.97 kcal Atomic # 14 Polarization: -0.88 SS G_CDS: -5.08 Total: -5.96 kcal Total LS contribution 4.59 Total: 4.59 kcal Total: -10.07 -8.25 -18.32 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_11684966_15608500.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -19.895 kcal (2) G-P(sol) polarization free energy of solvation -10.067 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -29.961 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.253 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.320 kcal (6) G-S(sol) free energy of system = (1) + (5) -38.215 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.46 seconds