Wall clock time and date at job start Tue Mar 9 2021 12:57:22 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.34772 * 1 3 3 O 1.21283 * 120.00134 * 2 1 4 4 C 1.50697 * 120.00360 * 180.02562 * 2 1 3 5 5 H 1.09005 * 112.84802 * 311.19222 * 4 2 1 6 6 C 1.54052 * 113.62270 * 82.50326 * 4 2 1 7 7 C 1.53781 * 86.98687 * 139.97933 * 6 4 2 8 8 H 1.09002 * 113.61445 * 89.16393 * 7 6 4 9 9 N 1.46497 * 113.61305 * 219.98100 * 7 6 4 10 10 C 1.34775 * 120.00126 * 254.13352 * 9 7 6 11 11 O 1.21286 * 119.99866 * 0.02562 * 10 9 7 12 12 C 1.50697 * 120.00136 * 180.02562 * 10 9 7 13 13 C 1.53005 * 109.47331 * 180.02562 * 12 10 9 14 14 O 1.42896 * 109.47087 * 179.97438 * 13 12 10 15 15 C 1.35901 * 116.99769 * 179.97438 * 14 13 12 16 16 C 1.38730 * 120.05527 * 359.72883 * 15 14 13 17 17 C 1.38150 * 119.94441 * 179.69685 * 16 15 14 18 18 C 1.38273 * 120.05077 * 0.59772 * 17 16 15 19 19 C 1.50701 * 119.93808 * 179.69964 * 18 17 16 20 20 O 1.42901 * 109.46944 * 119.97756 * 19 18 17 21 21 Si 1.86298 * 109.47641 * 359.97438 * 19 18 17 22 22 C 1.38255 * 120.11440 * 359.67586 * 18 17 16 23 23 C 1.38147 * 120.05712 * 0.02562 * 22 18 17 24 24 C 1.53783 * 113.61605 * 180.02562 * 4 2 1 25 25 H 0.97010 * 119.99465 * 179.97438 * 1 2 3 26 26 H 0.96998 * 120.00579 * 0.02562 * 1 2 3 27 27 H 1.08999 * 113.60931 * 25.47311 * 6 4 2 28 28 H 1.08998 * 113.69722 * 254.49393 * 6 4 2 29 29 H 0.97006 * 120.00058 * 74.13996 * 9 7 6 30 30 H 1.09012 * 109.47186 * 299.99920 * 12 10 9 31 31 H 1.09001 * 109.47748 * 59.99944 * 12 10 9 32 32 H 1.08998 * 109.46702 * 299.99984 * 13 12 10 33 33 H 1.08999 * 109.46772 * 59.99548 * 13 12 10 34 34 H 1.08002 * 120.03199 * 359.97438 * 16 15 14 35 35 H 1.07994 * 119.97239 * 180.27414 * 17 16 15 36 36 H 1.09006 * 109.46999 * 239.97492 * 19 18 17 37 37 H 0.96696 * 113.99829 * 179.97438 * 20 19 18 38 38 H 1.48494 * 109.99911 * 59.99664 * 21 19 18 39 39 H 1.48497 * 110.00232 * 181.32104 * 21 19 18 40 40 H 1.07996 * 119.97660 * 180.02562 * 22 18 17 41 41 H 1.07994 * 120.03186 * 180.02562 * 23 22 18 42 42 H 1.08992 * 113.61796 * 105.46609 * 24 4 2 43 43 H 1.09005 * 113.68996 * 334.57220 * 24 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.3477 0.0000 0.0000 3 8 1.9542 1.0503 0.0000 4 6 2.1013 -1.3050 -0.0006 5 1 1.7400 -2.0027 0.7550 6 6 2.2505 -1.9311 -1.4002 7 6 3.6826 -2.3111 -0.9886 8 1 3.7538 -3.2850 -0.5041 9 7 4.6672 -2.1349 -2.0590 10 6 5.1688 -3.2109 -2.6970 11 8 4.8048 -4.3251 -2.3852 12 6 6.1820 -3.0297 -3.7977 13 6 6.5845 -4.3983 -4.3509 14 8 7.5448 -4.2264 -5.3950 15 6 8.0099 -5.3526 -5.9969 16 6 7.5557 -6.5977 -5.5871 17 6 8.0254 -7.7407 -6.2048 18 6 8.9567 -7.6450 -7.2224 19 6 9.4724 -8.8938 -7.8899 20 8 9.1634 -8.8508 -9.2844 21 14 8.6665 -10.3871 -7.1209 22 6 9.4152 -6.4056 -7.6288 23 6 8.9441 -5.2593 -7.0185 24 6 3.6296 -1.1339 0.0001 25 1 -0.4850 -0.8402 -0.0004 26 1 -0.4851 0.8400 -0.0004 27 1 2.2077 -1.2035 -2.2107 28 1 1.6015 -2.7907 -1.5671 29 1 4.9581 -1.2438 -2.3085 30 1 5.7471 -2.4289 -4.5966 31 1 7.0627 -2.5244 -3.4014 32 1 7.0192 -4.9994 -3.5522 33 1 5.7036 -4.9033 -4.7473 34 1 6.8321 -6.6733 -4.7889 35 1 7.6688 -8.7099 -5.8892 36 1 10.5527 -8.9562 -7.7589 37 1 9.4668 -9.6247 -9.7785 38 1 7.1933 -10.3141 -7.2927 39 1 9.1903 -11.6267 -7.7487 40 1 10.1423 -6.3334 -8.4240 41 1 9.3022 -4.2914 -7.3365 42 1 4.0928 -1.3507 0.9626 43 1 3.9647 -0.1890 -0.4277 There are 59 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 59 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_11684966_4549602.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:57:22 Heat of formation + Delta-G solvation = -99.133605 kcal Electronic energy + Delta-G solvation = -25461.245955 eV Core-core repulsion = 21473.738333 eV Total energy + Delta-G solvation = -3987.507622 eV No. of doubly occupied orbitals = 59 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 321.145 amu Computer time = 0.81 seconds Orbital eigenvalues (eV) -41.65192 -41.26269 -40.46948 -39.13461 -38.45806 -37.36713 -34.76987 -34.40681 -33.26855 -32.02517 -31.51326 -27.60765 -26.74982 -26.39660 -25.37741 -23.59484 -22.27133 -21.92130 -21.51257 -20.46463 -19.48182 -18.60805 -18.54189 -17.87871 -17.85930 -17.45798 -17.17503 -16.78044 -16.62417 -16.36441 -16.07705 -15.70248 -15.55857 -15.33848 -14.98677 -14.65541 -14.46140 -14.27208 -14.16687 -13.96520 -13.68552 -13.53098 -13.37967 -12.91153 -12.81501 -12.45653 -12.38438 -12.23603 -11.99265 -11.74303 -11.70817 -11.69124 -11.07482 -10.90138 -10.67187 -10.48927 -10.10103 -10.03464 -9.19686 -4.93813 0.27714 0.31126 1.30462 1.49452 1.58231 1.58485 1.72418 1.93842 2.43876 2.62391 2.72713 3.38314 3.40251 3.43316 3.57923 3.71544 3.79265 3.82323 3.88043 3.91555 3.92838 4.04272 4.25179 4.26805 4.34147 4.42730 4.47294 4.56790 4.66334 4.67535 4.69949 4.72515 4.79181 4.89360 4.97271 4.97662 5.14860 5.18625 5.28146 5.50372 5.50924 5.71512 5.87134 6.32506 6.44436 6.46791 6.60388 7.14111 7.32623 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.839 5.839 2 C 0.523 3.477 3 O -0.594 6.594 4 C -0.131 4.131 5 H 0.144 0.856 6 C -0.128 4.128 7 C 0.122 3.878 8 H 0.113 0.887 9 N -0.708 5.708 10 C 0.523 3.477 11 O -0.579 6.579 12 C -0.135 4.135 13 C 0.072 3.928 14 O -0.321 6.321 15 C 0.122 3.878 16 C -0.208 4.208 17 C -0.082 4.082 18 C -0.125 4.125 19 C -0.078 4.078 20 O -0.559 6.559 21 Si 0.756 3.244 22 C -0.061 4.061 23 C -0.159 4.159 24 C -0.122 4.122 25 H 0.418 0.582 26 H 0.405 0.595 27 H 0.085 0.915 28 H 0.092 0.908 29 H 0.417 0.583 30 H 0.124 0.876 31 H 0.127 0.873 32 H 0.070 0.930 33 H 0.064 0.936 34 H 0.143 0.857 35 H 0.143 0.857 36 H 0.097 0.903 37 H 0.394 0.606 38 H -0.303 1.303 39 H -0.284 1.284 40 H 0.141 0.859 41 H 0.143 0.857 42 H 0.088 0.912 43 H 0.091 0.909 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.950 -0.726 2.651 2.909 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.402 5.402 2 C 0.309 3.691 3 O -0.475 6.475 4 C -0.152 4.152 5 H 0.162 0.838 6 C -0.167 4.167 7 C 0.017 3.983 8 H 0.131 0.869 9 N -0.360 5.360 10 C 0.310 3.690 11 O -0.459 6.459 12 C -0.175 4.175 13 C -0.003 4.003 14 O -0.235 6.235 15 C 0.077 3.923 16 C -0.227 4.227 17 C -0.099 4.099 18 C -0.125 4.125 19 C -0.187 4.187 20 O -0.369 6.369 21 Si 0.662 3.338 22 C -0.079 4.079 23 C -0.178 4.178 24 C -0.161 4.161 25 H 0.249 0.751 26 H 0.236 0.764 27 H 0.104 0.896 28 H 0.110 0.890 29 H 0.254 0.746 30 H 0.142 0.858 31 H 0.145 0.855 32 H 0.088 0.912 33 H 0.083 0.917 34 H 0.161 0.839 35 H 0.160 0.840 36 H 0.115 0.885 37 H 0.245 0.755 38 H -0.230 1.230 39 H -0.211 1.211 40 H 0.158 0.842 41 H 0.161 0.839 42 H 0.107 0.893 43 H 0.109 0.891 Dipole moment (debyes) X Y Z Total from point charges -1.378 -0.887 2.893 3.325 hybrid contribution -0.439 0.187 -1.244 1.332 sum -1.817 -0.700 1.649 2.552 Atomic orbital electron populations 1.43829 1.06555 1.13762 1.76026 1.20792 0.83345 0.91060 0.73928 1.90742 1.69397 1.35320 1.51996 1.22659 0.96428 0.94901 1.01252 0.83806 1.23402 0.97284 1.01082 0.94906 1.22493 0.87515 1.00059 0.88260 0.86883 1.45897 1.43652 1.09723 1.36684 1.20605 0.81407 0.84317 0.82642 1.90731 1.62146 1.25863 1.67157 1.21456 1.00044 0.98074 0.97879 1.22473 0.91018 0.98114 0.88720 1.85957 1.57689 1.29979 1.49887 1.19165 0.94291 0.85515 0.93327 1.21401 1.05091 0.91713 1.04477 1.20953 0.95081 0.98596 0.95293 1.19421 0.99936 0.94748 0.98432 1.24897 1.04874 1.04038 0.84889 1.86544 1.83361 1.47722 1.19254 0.94247 0.76772 0.73199 0.89600 1.20980 0.98379 0.90715 0.97800 1.20674 0.99324 1.00343 0.97417 1.23220 0.93890 0.98457 1.00517 0.75077 0.76446 0.89639 0.88961 0.74621 0.85824 0.85531 0.91171 0.91728 0.83929 0.84028 0.88531 0.75536 1.23039 1.21105 0.84154 0.83898 0.89328 0.89099 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.84 5.39 8.87 -173.54 -1.54 3.85 16 2 C 0.52 0.09 7.63 87.66 0.67 0.76 16 3 O -0.59 -6.08 16.74 -3.04 -0.05 -6.13 16 4 C -0.13 0.71 4.15 -10.92 -0.05 0.66 16 5 H 0.14 -1.46 8.14 -2.38 -0.02 -1.48 16 6 C -0.13 0.69 7.45 31.21 0.23 0.92 16 7 C 0.12 -0.45 4.21 45.53 0.19 -0.26 16 8 H 0.11 -0.17 7.50 -2.39 -0.02 -0.19 16 9 N -0.71 2.94 5.36 -439.97 -2.36 0.58 16 10 C 0.52 -0.01 7.83 87.66 0.69 0.68 16 11 O -0.58 -4.64 15.60 -3.05 -0.05 -4.69 16 12 C -0.14 0.55 6.07 29.85 0.18 0.73 16 13 C 0.07 0.07 4.03 71.98 0.29 0.36 16 14 O -0.32 -1.32 10.14 -92.44 -0.94 -2.26 16 15 C 0.12 0.68 6.69 22.51 0.15 0.83 16 16 C -0.21 -0.91 9.04 22.37 0.20 -0.71 16 17 C -0.08 -0.30 8.66 22.26 0.19 -0.11 16 18 C -0.13 -0.53 5.42 -19.85 -0.11 -0.64 16 19 C -0.08 -0.06 2.81 71.24 0.20 0.14 16 20 O -0.56 -1.84 12.74 -148.98 -1.90 -3.74 16 21 Si 0.76 -0.33 29.78 68.60 2.04 1.71 16 22 C -0.06 -0.26 9.60 22.25 0.21 -0.05 16 23 C -0.16 -0.74 9.99 22.37 0.22 -0.51 16 24 C -0.12 0.46 7.16 31.14 0.22 0.68 16 25 H 0.42 -5.26 8.83 -92.70 -0.82 -6.08 16 26 H 0.40 -2.67 8.93 -92.71 -0.83 -3.50 16 27 H 0.09 -0.34 8.10 -2.39 -0.02 -0.35 16 28 H 0.09 -0.61 8.14 -2.39 -0.02 -0.63 16 29 H 0.42 -3.56 8.71 -92.70 -0.81 -4.36 16 30 H 0.12 -0.88 8.14 -2.38 -0.02 -0.90 16 31 H 0.13 -0.95 8.14 -2.39 -0.02 -0.97 16 32 H 0.07 0.11 7.61 -2.39 -0.02 0.09 16 33 H 0.06 0.15 7.63 -2.39 -0.02 0.14 16 34 H 0.14 0.28 6.30 -2.91 -0.02 0.26 16 35 H 0.14 -0.02 4.87 -2.91 -0.01 -0.04 16 36 H 0.10 -0.34 7.96 -2.38 -0.02 -0.36 16 37 H 0.39 -1.92 8.74 -74.06 -0.65 -2.57 16 38 H -0.30 -2.23 7.11 99.48 0.71 -1.52 16 39 H -0.28 -0.91 7.11 99.48 0.71 -0.20 16 40 H 0.14 0.23 8.06 -2.91 -0.02 0.21 16 41 H 0.14 0.25 8.06 -2.91 -0.02 0.22 16 42 H 0.09 -0.41 8.14 -2.39 -0.02 -0.43 16 43 H 0.09 -0.08 7.41 -2.38 -0.02 -0.10 16 Total: 0.00 -26.70 363.61 -3.26 -29.96 By element: Atomic # 1 Polarization: -20.80 SS G_CDS: -1.97 Total: -22.78 kcal Atomic # 6 Polarization: 0.00 SS G_CDS: 3.50 Total: 3.50 kcal Atomic # 7 Polarization: 8.33 SS G_CDS: -3.90 Total: 4.43 kcal Atomic # 8 Polarization: -13.89 SS G_CDS: -2.93 Total: -16.82 kcal Atomic # 14 Polarization: -0.33 SS G_CDS: 2.04 Total: 1.71 kcal Total: -26.70 -3.26 -29.96 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_11684966_4549602.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -69.170 kcal (2) G-P(sol) polarization free energy of solvation -26.702 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -95.873 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.261 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -29.963 kcal (6) G-S(sol) free energy of system = (1) + (5) -99.134 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.81 seconds