Wall clock time and date at job start Tue Mar 9 2021 12:57:56 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42902 * 1 3 3 C 1.35897 * 117.00394 * 2 1 4 4 C 1.38608 * 120.02667 * 180.27359 * 3 2 1 5 5 C 1.38652 * 119.88960 * 180.20978 * 4 3 2 6 6 O 1.35903 * 120.03141 * 179.79702 * 5 4 3 7 7 C 1.42904 * 116.99421 * 359.71997 * 6 5 4 8 8 C 1.50696 * 109.46797 * 179.97438 * 7 6 5 9 9 O 1.21276 * 120.00336 * 0.02562 * 8 7 6 10 10 N 1.34783 * 120.00002 * 180.02562 * 8 7 6 11 11 C 1.46500 * 120.00221 * 180.02562 * 10 8 7 12 12 H 1.09000 * 112.84782 * 336.19779 * 11 10 8 13 13 C 1.53785 * 113.61409 * 107.49438 * 11 10 8 14 14 C 1.53784 * 87.07877 * 139.98345 * 13 11 10 15 15 H 1.08997 * 113.69375 * 89.12615 * 14 13 11 16 16 C 1.50696 * 113.61643 * 220.02339 * 14 13 11 17 17 N 1.34777 * 120.00076 * 277.49954 * 16 14 13 18 18 O 1.21281 * 120.00074 * 97.49456 * 16 14 13 19 19 C 1.53773 * 113.61486 * 204.99518 * 11 10 8 20 20 C 1.38747 * 119.94602 * 359.51612 * 5 4 3 21 21 C 1.50700 * 119.97631 * 180.27269 * 20 5 4 22 22 O 1.42902 * 109.47497 * 285.00665 * 21 20 5 23 23 Si 1.86301 * 109.47338 * 165.00276 * 21 20 5 24 24 C 1.38201 * 120.05360 * 0.25959 * 20 5 4 25 25 C 1.38150 * 120.10798 * 359.97032 * 24 20 5 26 26 H 1.08996 * 109.47447 * 180.02562 * 1 2 3 27 27 H 1.09005 * 109.46778 * 300.00387 * 1 2 3 28 28 H 1.08999 * 109.47044 * 59.99511 * 1 2 3 29 29 H 1.08007 * 120.05725 * 359.97438 * 4 3 2 30 30 H 1.09006 * 109.47150 * 60.00594 * 7 6 5 31 31 H 1.08997 * 109.47624 * 300.00080 * 7 6 5 32 32 H 0.97000 * 119.99654 * 359.97438 * 10 8 7 33 33 H 1.08999 * 113.61271 * 25.44034 * 13 11 10 34 34 H 1.08990 * 113.61860 * 254.53143 * 13 11 10 35 35 H 0.97001 * 120.00485 * 180.02562 * 17 16 14 36 36 H 0.97005 * 119.99790 * 359.72082 * 17 16 14 37 37 H 1.09006 * 113.61364 * 105.47009 * 19 11 10 38 38 H 1.08995 * 113.61785 * 334.56919 * 19 11 10 39 39 H 1.08998 * 109.46817 * 45.00694 * 21 20 5 40 40 H 0.96702 * 113.99713 * 299.99418 * 22 21 20 41 41 H 1.48505 * 110.00065 * 58.68311 * 23 21 20 42 42 H 1.48494 * 110.00102 * 180.02562 * 23 21 20 43 43 H 1.08001 * 119.94201 * 179.97438 * 24 20 5 44 44 H 1.08004 * 119.97112 * 180.02562 * 25 24 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0461 1.2108 0.0000 4 6 3.4302 1.2839 -0.0057 5 6 4.0568 2.5207 -0.0013 6 8 5.4138 2.5958 -0.0027 7 6 6.1317 1.3601 -0.0027 8 6 7.6125 1.6397 -0.0050 9 8 8.0136 2.7842 -0.0061 10 7 8.4913 0.6177 -0.0058 11 6 9.9308 0.8894 -0.0075 12 1 10.1758 1.8709 -0.4134 13 6 10.6163 0.5876 1.3356 14 6 11.7879 0.0164 0.5196 15 1 12.5425 0.7583 0.2583 16 6 12.3799 -1.2376 1.1096 17 7 13.2854 -1.1520 2.1042 18 8 12.0414 -2.3238 0.6895 19 6 10.7723 -0.2513 -0.6037 20 6 3.2974 3.6819 -0.0013 21 6 3.9777 5.0266 -0.0027 22 8 4.5053 5.2950 1.2979 23 14 2.7439 6.3465 -0.4569 24 6 1.9174 3.6064 -0.0003 25 6 1.2908 2.3752 0.0001 26 1 -0.3634 -1.0276 0.0005 27 1 -0.3633 0.5139 0.8900 28 1 -0.3633 0.5139 -0.8899 29 1 4.0197 0.3789 -0.0098 30 1 5.8691 0.7873 -0.8921 31 1 5.8709 0.7884 0.8879 32 1 8.1705 -0.2977 -0.0046 33 1 10.0951 -0.1601 1.9335 34 1 10.8747 1.4807 1.9044 35 1 13.6667 -1.9592 2.4838 36 1 13.5591 -0.2831 2.4375 37 1 11.1568 -0.0353 -1.6006 38 1 10.2938 -1.2283 -0.5360 39 1 4.7894 5.0223 -0.7302 40 1 3.8374 5.3140 1.9970 41 1 1.6160 6.3415 0.5091 42 1 3.4026 7.6773 -0.4625 43 1 1.3280 4.5114 0.0001 44 1 0.2122 2.3188 0.0005 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_11684966_4974312.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:57:56 Heat of formation + Delta-G solvation = -124.241169 kcal Electronic energy + Delta-G solvation = -28661.210168 eV Core-core repulsion = 24353.931608 eV Total energy + Delta-G solvation = -4307.278560 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 337.145 amu Computer time = 0.85 seconds Orbital eigenvalues (eV) -41.90062 -41.53680 -40.62382 -39.83651 -38.64458 -38.18397 -37.00108 -34.82015 -34.44608 -32.30971 -31.45284 -29.69769 -28.37003 -26.95467 -26.76417 -26.12982 -23.85454 -22.51334 -22.30947 -21.69581 -20.53768 -19.97700 -18.68058 -18.53192 -18.11036 -17.89169 -17.73171 -17.53495 -17.20770 -16.67519 -16.60597 -16.48921 -16.38940 -16.05055 -15.65612 -15.59632 -15.20295 -15.14159 -14.84394 -14.51111 -14.35844 -13.77415 -13.63489 -13.52190 -13.38306 -13.32205 -13.14338 -12.49800 -12.45551 -12.29891 -12.26417 -12.02682 -11.73585 -11.66197 -11.62315 -11.07620 -10.91939 -10.68474 -10.50746 -10.18036 -9.70885 -9.10854 -4.91625 0.19627 0.30325 1.32720 1.38096 1.42568 1.56786 1.57331 1.97101 2.24267 2.49534 2.56393 2.71320 3.34549 3.39731 3.50182 3.54004 3.69041 3.72094 3.80295 3.85120 3.94112 4.03258 4.06298 4.16591 4.22876 4.34268 4.40293 4.42052 4.45578 4.52264 4.64079 4.66603 4.69705 4.78484 4.86014 4.95339 5.02151 5.07901 5.23199 5.27424 5.43388 5.48243 5.85910 6.12233 6.34811 6.41299 6.43926 6.58026 7.06833 7.31017 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.016 3.984 2 O -0.331 6.331 3 C 0.164 3.836 4 C -0.253 4.253 5 C 0.177 3.823 6 O -0.302 6.302 7 C 0.033 3.967 8 C 0.517 3.483 9 O -0.564 6.564 10 N -0.702 5.702 11 C 0.122 3.878 12 H 0.111 0.889 13 C -0.128 4.128 14 C -0.131 4.131 15 H 0.144 0.856 16 C 0.525 3.475 17 N -0.839 5.839 18 O -0.593 6.593 19 C -0.120 4.120 20 C -0.195 4.195 21 C -0.078 4.078 22 O -0.549 6.549 23 Si 0.781 3.219 24 C -0.041 4.041 25 C -0.237 4.237 26 H 0.116 0.884 27 H 0.067 0.933 28 H 0.071 0.929 29 H 0.152 0.848 30 H 0.123 0.877 31 H 0.118 0.882 32 H 0.419 0.581 33 H 0.088 0.912 34 H 0.090 0.910 35 H 0.405 0.595 36 H 0.418 0.582 37 H 0.089 0.911 38 H 0.094 0.906 39 H 0.098 0.902 40 H 0.381 0.619 41 H -0.263 1.263 42 H -0.307 1.307 43 H 0.156 0.844 44 H 0.157 0.843 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.247 -2.625 0.139 4.178 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.078 4.078 2 O -0.244 6.244 3 C 0.118 3.882 4 C -0.272 4.272 5 C 0.131 3.869 6 O -0.214 6.214 7 C -0.045 4.045 8 C 0.303 3.697 9 O -0.442 6.442 10 N -0.355 5.355 11 C 0.017 3.983 12 H 0.129 0.871 13 C -0.167 4.167 14 C -0.152 4.152 15 H 0.162 0.838 16 C 0.310 3.690 17 N -0.402 5.402 18 O -0.473 6.473 19 C -0.158 4.158 20 C -0.196 4.196 21 C -0.185 4.185 22 O -0.357 6.357 23 Si 0.685 3.315 24 C -0.058 4.058 25 C -0.256 4.256 26 H 0.134 0.866 27 H 0.085 0.915 28 H 0.089 0.911 29 H 0.169 0.831 30 H 0.141 0.859 31 H 0.135 0.865 32 H 0.256 0.744 33 H 0.107 0.893 34 H 0.109 0.891 35 H 0.236 0.764 36 H 0.249 0.751 37 H 0.108 0.892 38 H 0.112 0.888 39 H 0.116 0.884 40 H 0.230 0.770 41 H -0.189 1.189 42 H -0.236 1.236 43 H 0.174 0.826 44 H 0.175 0.825 Dipole moment (debyes) X Y Z Total from point charges -2.927 -1.698 -0.321 3.399 hybrid contribution 0.466 -0.770 1.620 1.854 sum -2.460 -2.468 1.300 3.719 Atomic orbital electron populations 1.23401 0.75996 1.05681 1.02707 1.86057 1.23769 1.26630 1.87935 1.18875 0.91653 0.84988 0.92709 1.20558 0.93434 0.97447 1.15767 1.18584 0.81740 0.93145 0.93469 1.86221 1.15489 1.31543 1.88114 1.22744 0.88662 0.86528 1.06539 1.20435 0.88426 0.85235 0.75588 1.90767 1.80663 1.22999 1.49778 1.45714 1.05838 1.09470 1.74507 1.22514 0.78322 1.00211 0.97248 0.87143 1.23368 0.94590 1.01795 0.96984 1.22598 0.98067 0.95930 0.98616 0.83841 1.20738 0.78356 0.90678 0.79209 1.43828 1.44237 1.13854 1.38260 1.90740 1.62536 1.31363 1.62681 1.23225 0.95127 0.98784 0.98697 1.19613 0.93498 0.93970 1.12535 1.25161 1.06298 0.99659 0.87385 1.86649 1.38546 1.93046 1.17441 0.94088 0.75466 0.73372 0.88606 1.20952 0.92025 0.98796 0.94074 1.21397 1.01610 0.91227 1.11357 0.86610 0.91464 0.91066 0.83056 0.85921 0.86453 0.74373 0.89332 0.89121 0.76395 0.75100 0.89209 0.88759 0.88386 0.77027 1.18859 1.23597 0.82648 0.82509 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.10 9.81 113.37 1.11 1.01 16 2 O -0.33 -0.40 10.49 -92.39 -0.97 -1.37 16 3 C 0.16 0.33 6.68 22.49 0.15 0.48 16 4 C -0.25 -0.67 8.97 22.46 0.20 -0.46 16 5 C 0.18 1.02 6.66 22.49 0.15 1.17 16 6 O -0.30 -2.56 8.99 -73.43 -0.66 -3.22 16 7 C 0.03 0.01 5.22 71.23 0.37 0.38 16 8 C 0.52 2.42 7.91 87.65 0.69 3.11 16 9 O -0.56 -8.68 16.10 16.02 0.26 -8.42 16 10 N -0.70 1.41 5.35 -440.05 -2.36 -0.95 16 11 C 0.12 -0.20 4.24 45.52 0.19 -0.01 16 12 H 0.11 0.16 7.46 -2.39 -0.02 0.14 16 13 C -0.13 0.50 7.43 31.12 0.23 0.73 16 14 C -0.13 0.57 4.15 -11.01 -0.05 0.52 16 15 H 0.14 -1.28 8.14 -2.39 -0.02 -1.30 16 16 C 0.52 0.41 7.63 87.66 0.67 1.07 16 17 N -0.84 4.83 8.87 -173.53 -1.54 3.29 16 18 O -0.59 -6.25 16.74 -3.03 -0.05 -6.30 16 19 C -0.12 0.33 7.16 31.12 0.22 0.55 16 20 C -0.19 -0.85 5.27 -19.75 -0.10 -0.96 16 21 C -0.08 -0.46 2.37 71.24 0.17 -0.29 16 22 O -0.55 -5.34 12.88 -148.98 -1.92 -7.26 16 23 Si 0.78 0.39 30.24 68.60 2.07 2.47 16 24 C -0.04 0.01 8.65 22.24 0.19 0.20 16 25 C -0.24 0.19 9.04 22.38 0.20 0.40 16 26 H 0.12 -1.03 8.14 -2.39 -0.02 -1.05 16 27 H 0.07 -0.52 7.66 -2.38 -0.02 -0.54 16 28 H 0.07 -0.59 7.66 -2.39 -0.02 -0.60 16 29 H 0.15 -0.22 6.30 -2.91 -0.02 -0.24 16 30 H 0.12 -0.68 7.65 -2.38 -0.02 -0.70 16 31 H 0.12 -0.55 7.67 -2.39 -0.02 -0.57 16 32 H 0.42 -3.25 8.73 -92.71 -0.81 -4.06 16 33 H 0.09 -0.26 8.09 -2.39 -0.02 -0.28 16 34 H 0.09 -0.42 8.14 -2.39 -0.02 -0.44 16 35 H 0.41 -2.47 8.93 -92.71 -0.83 -3.30 16 36 H 0.42 -4.91 8.83 -92.70 -0.82 -5.73 16 37 H 0.09 -0.33 8.14 -2.38 -0.02 -0.35 16 38 H 0.09 -0.05 7.41 -2.39 -0.02 -0.07 16 39 H 0.10 0.87 7.82 -2.39 -0.02 0.86 16 40 H 0.38 0.86 8.70 -74.06 -0.64 0.22 16 41 H -0.26 -0.20 6.68 99.48 0.66 0.46 16 42 H -0.31 -2.72 7.11 99.48 0.71 -2.01 16 43 H 0.16 -0.68 4.85 -2.91 -0.01 -0.70 16 44 H 0.16 -0.95 6.29 -2.91 -0.02 -0.96 16 Total: 0.00 -32.33 371.27 -2.76 -35.09 By element: Atomic # 1 Polarization: -19.22 SS G_CDS: -2.00 Total: -21.23 kcal Atomic # 6 Polarization: 3.50 SS G_CDS: 4.41 Total: 7.91 kcal Atomic # 7 Polarization: 6.24 SS G_CDS: -3.90 Total: 2.35 kcal Atomic # 8 Polarization: -23.24 SS G_CDS: -3.34 Total: -26.58 kcal Atomic # 14 Polarization: 0.39 SS G_CDS: 2.07 Total: 2.47 kcal Total: -32.33 -2.76 -35.09 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_11684966_4974312.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -89.154 kcal (2) G-P(sol) polarization free energy of solvation -32.328 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -121.483 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.759 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.087 kcal (6) G-S(sol) free energy of system = (1) + (5) -124.241 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.85 seconds