Wall clock time and date at job start Tue Mar 9 2021 12:58:01 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42898 * 1 3 3 C 1.35992 * 117.00044 * 2 1 4 4 C 1.39158 * 120.07380 * 180.02562 * 3 2 1 5 5 O 1.35989 * 120.07062 * 0.02562 * 4 3 2 6 6 C 1.42904 * 117.00003 * 179.97438 * 5 4 3 7 7 C 1.50698 * 109.47209 * 179.97438 * 6 5 4 8 8 O 1.21284 * 120.00119 * 0.02562 * 7 6 5 9 9 N 1.34780 * 120.00142 * 179.97438 * 7 6 5 10 10 C 1.46497 * 120.00267 * 180.02562 * 9 7 6 11 11 H 1.09000 * 112.85228 * 23.80172 * 10 9 7 12 12 C 1.53774 * 113.61466 * 155.00036 * 10 9 7 13 13 C 1.53788 * 87.08095 * 139.97844 * 12 10 9 14 14 H 1.08997 * 113.61115 * 89.20239 * 13 12 10 15 15 C 1.50692 * 113.61472 * 220.01521 * 13 12 10 16 16 N 1.34778 * 120.00358 * 179.97438 * 15 13 12 17 17 O 1.21288 * 120.00472 * 0.02562 * 15 13 12 18 18 C 1.53780 * 87.07801 * 334.56663 * 13 12 10 19 19 C 1.38566 * 119.85189 * 179.97438 * 4 3 2 20 20 C 1.38242 * 120.00253 * 359.97438 * 19 4 3 21 21 C 1.38249 * 120.14424 * 0.02620 * 20 19 4 22 22 C 1.50693 * 119.92305 * 179.97438 * 21 20 19 23 23 O 1.42907 * 109.47661 * 119.99735 * 22 21 20 24 24 Si 1.86298 * 109.47618 * 359.97438 * 22 21 20 25 25 C 1.38238 * 120.14735 * 0.22609 * 21 20 19 26 26 H 1.09000 * 109.46933 * 60.00512 * 1 2 3 27 27 H 1.08997 * 109.47269 * 180.02562 * 1 2 3 28 28 H 1.09000 * 109.47227 * 300.01021 * 1 2 3 29 29 H 1.08997 * 109.47111 * 300.00217 * 6 5 4 30 30 H 1.08996 * 109.47140 * 60.00090 * 6 5 4 31 31 H 0.97000 * 119.99452 * 0.02562 * 9 7 6 32 32 H 1.09007 * 113.61493 * 254.52242 * 12 10 9 33 33 H 1.08994 * 113.61918 * 25.35006 * 12 10 9 34 34 H 0.97005 * 119.99290 * 0.02562 * 16 15 13 35 35 H 0.96994 * 120.00306 * 180.02562 * 16 15 13 36 36 H 1.08999 * 113.61471 * 270.87752 * 18 13 12 37 37 H 1.09002 * 113.60803 * 139.98219 * 18 13 12 38 38 H 1.08006 * 119.99199 * 179.97438 * 19 4 3 39 39 H 1.07996 * 119.92316 * 180.02562 * 20 19 4 40 40 H 1.09000 * 109.46936 * 239.99359 * 22 21 20 41 41 H 0.96697 * 114.00527 * 179.97438 * 23 22 21 42 42 H 1.48506 * 109.99834 * 298.68714 * 24 22 21 43 43 H 1.48502 * 110.00011 * 59.99978 * 24 22 21 44 44 H 1.08008 * 119.99836 * 179.74773 * 25 21 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0464 1.2117 0.0000 4 6 3.4360 1.2863 -0.0005 5 8 4.1795 0.1477 -0.0016 6 6 5.6003 0.3006 -0.0027 7 6 6.2518 -1.0582 -0.0031 8 8 5.5669 -2.0592 -0.0030 9 7 7.5957 -1.1613 -0.0046 10 6 8.2291 -2.4823 -0.0056 11 1 7.5830 -3.2612 -0.4104 12 6 9.6462 -2.4855 -0.6026 13 6 10.0325 -3.4615 0.5213 14 1 9.8813 -4.5090 0.2610 15 6 11.3939 -3.1956 1.1102 16 7 11.8615 -3.9748 2.1055 17 8 12.0685 -2.2797 0.6892 18 6 8.8790 -2.8547 1.3374 19 6 4.0603 2.5234 -0.0011 20 6 3.3029 3.6799 -0.0016 21 6 1.9224 3.6057 -0.0011 22 6 1.1017 4.8696 -0.0011 23 8 0.2769 4.9021 -1.1676 24 14 2.2365 6.3471 -0.0011 25 6 1.2933 2.3748 0.0047 26 1 -0.3633 0.5138 -0.8900 27 1 -0.3633 -1.0276 0.0005 28 1 -0.3634 0.5140 0.8899 29 1 5.9058 0.8508 -0.8926 30 1 5.9073 0.8500 0.8873 31 1 8.1434 -0.3608 -0.0051 32 1 9.6992 -2.9241 -1.5991 33 1 10.1497 -1.5210 -0.5374 34 1 11.3218 -4.7070 2.4425 35 1 12.7376 -3.8034 2.4848 36 1 9.1733 -1.9916 1.9344 37 1 8.3126 -3.5914 1.9072 38 1 5.1386 2.5839 -0.0011 39 1 3.7908 4.6433 -0.0024 40 1 0.4732 4.8946 0.8891 41 1 -0.2804 5.6895 -1.2335 42 1 3.0772 6.3418 1.2231 43 1 3.0992 6.3249 -1.2096 44 1 0.2146 2.3197 0.0093 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_22_11684966_60476.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:58:01 Heat of formation + Delta-G solvation = -113.703401 kcal Electronic energy + Delta-G solvation = -28342.493827 eV Core-core repulsion = 24035.672219 eV Total energy + Delta-G solvation = -4306.821608 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 337.145 amu Computer time = 0.79 seconds Orbital eigenvalues (eV) -41.84954 -41.54668 -40.49345 -39.31808 -38.78734 -38.30329 -37.01649 -34.78844 -34.44970 -32.13887 -31.47506 -29.83359 -28.44958 -27.06705 -26.88814 -26.08892 -23.70521 -22.62457 -22.14892 -21.66380 -20.60793 -19.72099 -18.70386 -18.55826 -18.25273 -18.12846 -17.90872 -17.49732 -17.44616 -16.68196 -16.55195 -16.47271 -16.20287 -15.78631 -15.65343 -15.55670 -15.33912 -15.08618 -14.56423 -14.25777 -14.13608 -13.99405 -13.74328 -13.64189 -13.48671 -13.34136 -12.79152 -12.58271 -12.34605 -12.29557 -12.24158 -12.17745 -12.01553 -11.83237 -11.80356 -10.98120 -10.81776 -10.73753 -10.37948 -10.17320 -9.76439 -8.84122 -5.00120 0.18317 0.28315 1.24615 1.43157 1.46708 1.57462 1.60859 1.94111 2.32103 2.40824 2.54536 2.63465 3.23266 3.28983 3.33317 3.47699 3.58361 3.69018 3.70581 3.75518 3.82929 3.91867 3.92640 4.06310 4.15667 4.23461 4.29706 4.31061 4.39243 4.43620 4.51486 4.56864 4.57795 4.65893 4.71293 4.82651 4.97862 5.00454 5.07280 5.37567 5.38020 5.54122 5.72551 5.96678 6.26524 6.32506 6.54584 6.58460 7.09453 7.21235 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.024 3.976 2 O -0.301 6.301 3 C 0.109 3.891 4 C 0.104 3.896 5 O -0.276 6.276 6 C 0.037 3.963 7 C 0.518 3.482 8 O -0.508 6.508 9 N -0.718 5.718 10 C 0.126 3.874 11 H 0.123 0.877 12 C -0.123 4.123 13 C -0.139 4.139 14 H 0.121 0.879 15 C 0.529 3.471 16 N -0.854 5.854 17 O -0.542 6.542 18 C -0.135 4.135 19 C -0.167 4.167 20 C -0.121 4.121 21 C -0.070 4.070 22 C -0.070 4.070 23 O -0.546 6.546 24 Si 0.685 3.315 25 C -0.142 4.142 26 H 0.057 0.943 27 H 0.103 0.897 28 H 0.056 0.944 29 H 0.095 0.905 30 H 0.094 0.906 31 H 0.404 0.596 32 H 0.084 0.916 33 H 0.102 0.898 34 H 0.403 0.597 35 H 0.402 0.598 36 H 0.091 0.909 37 H 0.085 0.915 38 H 0.139 0.861 39 H 0.123 0.877 40 H 0.075 0.925 41 H 0.383 0.617 42 H -0.255 1.255 43 H -0.250 1.250 44 H 0.143 0.857 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.950 2.687 2.740 3.954 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.071 4.071 2 O -0.214 6.214 3 C 0.063 3.937 4 C 0.058 3.942 5 O -0.188 6.188 6 C -0.042 4.042 7 C 0.303 3.697 8 O -0.382 6.382 9 N -0.371 5.371 10 C 0.021 3.979 11 H 0.141 0.859 12 C -0.162 4.162 13 C -0.161 4.161 14 H 0.139 0.861 15 C 0.313 3.687 16 N -0.417 5.417 17 O -0.418 6.418 18 C -0.175 4.175 19 C -0.186 4.186 20 C -0.139 4.139 21 C -0.070 4.070 22 C -0.180 4.180 23 O -0.352 6.352 24 Si 0.586 3.414 25 C -0.161 4.161 26 H 0.076 0.924 27 H 0.122 0.878 28 H 0.074 0.926 29 H 0.113 0.887 30 H 0.112 0.888 31 H 0.239 0.761 32 H 0.103 0.897 33 H 0.121 0.879 34 H 0.232 0.768 35 H 0.233 0.767 36 H 0.109 0.891 37 H 0.103 0.897 38 H 0.157 0.843 39 H 0.141 0.859 40 H 0.093 0.907 41 H 0.230 0.770 42 H -0.180 1.180 43 H -0.175 1.175 44 H 0.160 0.840 Dipole moment (debyes) X Y Z Total from point charges -0.048 1.885 2.230 2.921 hybrid contribution 0.322 -0.218 0.552 0.676 sum 0.275 1.668 2.782 3.255 Atomic orbital electron populations 1.23139 0.78097 1.04421 1.01403 1.86246 1.21375 1.25203 1.88538 1.18251 0.88955 0.85562 1.00931 1.18228 0.88334 0.85649 1.01970 1.86272 1.16017 1.27610 1.88898 1.22497 0.81315 0.96371 1.04026 1.20044 0.82543 0.90515 0.76604 1.90790 1.62621 1.37976 1.46783 1.45787 1.05843 1.09385 1.76097 1.22515 0.93118 0.85773 0.96475 0.85918 1.23274 0.94033 1.00693 0.98190 1.22562 0.92159 1.02158 0.99180 0.86118 1.20367 0.87769 0.81380 0.79159 1.43897 1.22985 1.35462 1.39327 1.90765 1.59224 1.30934 1.60911 1.23432 0.95026 1.01552 0.97456 1.20931 1.00390 0.90623 1.06657 1.20532 0.92986 0.97583 1.02781 1.19033 0.92692 0.93531 1.01792 1.24656 0.99654 1.02870 0.90819 1.86494 1.58744 1.47768 1.42202 0.95340 0.81124 0.84226 0.80716 1.20910 1.00446 0.90225 1.04519 0.92395 0.87821 0.92575 0.88735 0.88803 0.76074 0.89701 0.87931 0.76848 0.76682 0.89060 0.89678 0.84307 0.85939 0.90726 0.76986 1.17955 1.17459 0.83969 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 0.02 9.81 101.05 0.99 1.01 16 2 O -0.30 -1.54 10.28 -34.22 -0.35 -1.89 16 3 C 0.11 0.51 6.70 -39.12 -0.26 0.24 16 4 C 0.10 0.44 6.70 -39.12 -0.26 0.18 16 5 O -0.28 -1.36 9.45 -47.33 -0.45 -1.81 16 6 C 0.04 0.02 5.22 36.00 0.19 0.20 16 7 C 0.52 1.12 7.91 -10.99 -0.09 1.03 16 8 O -0.51 -3.56 16.10 -14.35 -0.23 -3.79 16 9 N -0.72 0.77 5.35 -53.02 -0.28 0.48 16 10 C 0.13 -0.13 4.24 -67.12 -0.28 -0.41 16 11 H 0.12 0.03 7.46 -51.93 -0.39 -0.36 16 12 C -0.12 0.18 7.15 -25.92 -0.19 -0.01 16 13 C -0.14 0.28 4.15 -90.96 -0.38 -0.10 16 14 H 0.12 -0.47 8.14 -51.93 -0.42 -0.89 16 15 C 0.53 0.18 7.63 -10.99 -0.08 0.09 16 16 N -0.85 2.31 8.87 31.22 0.28 2.58 16 17 O -0.54 -2.62 16.74 5.55 0.09 -2.52 16 18 C -0.14 0.27 7.43 -25.92 -0.19 0.08 16 19 C -0.17 -0.33 9.04 -39.46 -0.36 -0.69 16 20 C -0.12 -0.30 8.66 -39.58 -0.34 -0.64 16 21 C -0.07 -0.19 5.42 -104.62 -0.57 -0.76 16 22 C -0.07 0.00 2.81 36.00 0.10 0.10 16 23 O -0.55 -0.06 12.75 -35.23 -0.45 -0.51 16 24 Si 0.68 -0.85 29.78 -169.99 -5.06 -5.91 16 25 C -0.14 -0.44 8.60 -39.46 -0.34 -0.77 16 26 H 0.06 0.00 7.67 -51.93 -0.40 -0.40 16 27 H 0.10 -0.08 8.14 -51.93 -0.42 -0.50 16 28 H 0.06 -0.03 7.65 -51.93 -0.40 -0.43 16 29 H 0.09 -0.20 7.66 -51.93 -0.40 -0.60 16 30 H 0.09 -0.22 7.66 -51.93 -0.40 -0.61 16 31 H 0.40 -1.52 8.73 -40.82 -0.36 -1.88 16 32 H 0.08 -0.15 8.14 -51.93 -0.42 -0.57 16 33 H 0.10 -0.05 7.41 -51.93 -0.38 -0.44 16 34 H 0.40 -2.19 8.83 -40.82 -0.36 -2.55 16 35 H 0.40 -1.20 8.93 -40.82 -0.36 -1.56 16 36 H 0.09 -0.14 8.09 -51.93 -0.42 -0.56 16 37 H 0.08 -0.20 8.14 -51.93 -0.42 -0.62 16 38 H 0.14 -0.17 6.30 -52.48 -0.33 -0.50 16 39 H 0.12 0.17 4.87 -52.49 -0.26 -0.08 16 40 H 0.07 -0.13 7.96 -51.93 -0.41 -0.54 16 41 H 0.38 -1.91 8.74 45.56 0.40 -1.51 16 42 H -0.25 -0.26 7.11 56.52 0.40 0.14 16 43 H -0.25 -0.48 7.11 56.52 0.40 -0.08 16 44 H 0.14 0.20 6.30 -52.48 -0.33 -0.13 16 LS Contribution 371.86 15.07 5.60 5.60 Total: 0.00 -14.29 371.86 -8.60 -22.89 By element: Atomic # 1 Polarization: -9.01 SS G_CDS: -5.69 Total: -14.70 kcal Atomic # 6 Polarization: 1.63 SS G_CDS: -2.06 Total: -0.43 kcal Atomic # 7 Polarization: 3.07 SS G_CDS: -0.01 Total: 3.07 kcal Atomic # 8 Polarization: -9.14 SS G_CDS: -1.39 Total: -10.52 kcal Atomic # 14 Polarization: -0.85 SS G_CDS: -5.06 Total: -5.91 kcal Total LS contribution 5.60 Total: 5.60 kcal Total: -14.29 -8.60 -22.89 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_11684966_60476.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -90.812 kcal (2) G-P(sol) polarization free energy of solvation -14.293 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -105.105 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.598 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.891 kcal (6) G-S(sol) free energy of system = (1) + (5) -113.703 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.79 seconds