Wall clock time and date at job start Tue Mar 9 2021 12:58:00 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42898 * 1 3 3 C 1.35992 * 117.00044 * 2 1 4 4 C 1.39158 * 120.07380 * 180.02562 * 3 2 1 5 5 O 1.35989 * 120.07062 * 0.02562 * 4 3 2 6 6 C 1.42904 * 117.00003 * 179.97438 * 5 4 3 7 7 C 1.50698 * 109.47209 * 179.97438 * 6 5 4 8 8 O 1.21284 * 120.00119 * 0.02562 * 7 6 5 9 9 N 1.34780 * 120.00142 * 179.97438 * 7 6 5 10 10 C 1.46497 * 120.00267 * 180.02562 * 9 7 6 11 11 H 1.09000 * 112.85228 * 23.80172 * 10 9 7 12 12 C 1.53774 * 113.61466 * 155.00036 * 10 9 7 13 13 C 1.53788 * 87.08095 * 139.97844 * 12 10 9 14 14 H 1.08997 * 113.61115 * 89.20239 * 13 12 10 15 15 C 1.50692 * 113.61472 * 220.01521 * 13 12 10 16 16 N 1.34778 * 120.00358 * 179.97438 * 15 13 12 17 17 O 1.21288 * 120.00472 * 0.02562 * 15 13 12 18 18 C 1.53780 * 87.07801 * 334.56663 * 13 12 10 19 19 C 1.38566 * 119.85189 * 179.97438 * 4 3 2 20 20 C 1.38242 * 120.00253 * 359.97438 * 19 4 3 21 21 C 1.38249 * 120.14424 * 0.02620 * 20 19 4 22 22 C 1.50693 * 119.92305 * 179.97438 * 21 20 19 23 23 O 1.42907 * 109.47661 * 119.99735 * 22 21 20 24 24 Si 1.86298 * 109.47618 * 359.97438 * 22 21 20 25 25 C 1.38238 * 120.14735 * 0.22609 * 21 20 19 26 26 H 1.09000 * 109.46933 * 60.00512 * 1 2 3 27 27 H 1.08997 * 109.47269 * 180.02562 * 1 2 3 28 28 H 1.09000 * 109.47227 * 300.01021 * 1 2 3 29 29 H 1.08997 * 109.47111 * 300.00217 * 6 5 4 30 30 H 1.08996 * 109.47140 * 60.00090 * 6 5 4 31 31 H 0.97000 * 119.99452 * 0.02562 * 9 7 6 32 32 H 1.09007 * 113.61493 * 254.52242 * 12 10 9 33 33 H 1.08994 * 113.61918 * 25.35006 * 12 10 9 34 34 H 0.97005 * 119.99290 * 0.02562 * 16 15 13 35 35 H 0.96994 * 120.00306 * 180.02562 * 16 15 13 36 36 H 1.08999 * 113.61471 * 270.87752 * 18 13 12 37 37 H 1.09002 * 113.60803 * 139.98219 * 18 13 12 38 38 H 1.08006 * 119.99199 * 179.97438 * 19 4 3 39 39 H 1.07996 * 119.92316 * 180.02562 * 20 19 4 40 40 H 1.09000 * 109.46936 * 239.99359 * 22 21 20 41 41 H 0.96697 * 114.00527 * 179.97438 * 23 22 21 42 42 H 1.48506 * 109.99834 * 298.68714 * 24 22 21 43 43 H 1.48502 * 110.00011 * 59.99978 * 24 22 21 44 44 H 1.08008 * 119.99836 * 179.74773 * 25 21 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0464 1.2117 0.0000 4 6 3.4360 1.2863 -0.0005 5 8 4.1795 0.1477 -0.0016 6 6 5.6003 0.3006 -0.0027 7 6 6.2518 -1.0582 -0.0031 8 8 5.5669 -2.0592 -0.0030 9 7 7.5957 -1.1613 -0.0046 10 6 8.2291 -2.4823 -0.0056 11 1 7.5830 -3.2612 -0.4104 12 6 9.6462 -2.4855 -0.6026 13 6 10.0325 -3.4615 0.5213 14 1 9.8813 -4.5090 0.2610 15 6 11.3939 -3.1956 1.1102 16 7 11.8615 -3.9748 2.1055 17 8 12.0685 -2.2797 0.6892 18 6 8.8790 -2.8547 1.3374 19 6 4.0603 2.5234 -0.0011 20 6 3.3029 3.6799 -0.0016 21 6 1.9224 3.6057 -0.0011 22 6 1.1017 4.8696 -0.0011 23 8 0.2769 4.9021 -1.1676 24 14 2.2365 6.3471 -0.0011 25 6 1.2933 2.3748 0.0047 26 1 -0.3633 0.5138 -0.8900 27 1 -0.3633 -1.0276 0.0005 28 1 -0.3634 0.5140 0.8899 29 1 5.9058 0.8508 -0.8926 30 1 5.9073 0.8500 0.8873 31 1 8.1434 -0.3608 -0.0051 32 1 9.6992 -2.9241 -1.5991 33 1 10.1497 -1.5210 -0.5374 34 1 11.3218 -4.7070 2.4425 35 1 12.7376 -3.8034 2.4848 36 1 9.1733 -1.9916 1.9344 37 1 8.3126 -3.5914 1.9072 38 1 5.1386 2.5839 -0.0011 39 1 3.7908 4.6433 -0.0024 40 1 0.4732 4.8946 0.8891 41 1 -0.2804 5.6895 -1.2335 42 1 3.0772 6.3418 1.2231 43 1 3.0992 6.3249 -1.2096 44 1 0.2146 2.3197 0.0093 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_11684966_60476.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:58:00 Heat of formation + Delta-G solvation = -122.990426 kcal Electronic energy + Delta-G solvation = -28342.896542 eV Core-core repulsion = 24035.672219 eV Total energy + Delta-G solvation = -4307.224323 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 337.145 amu Computer time = 0.91 seconds Orbital eigenvalues (eV) -41.96602 -41.58363 -40.62154 -39.47279 -38.87096 -38.38090 -37.04404 -34.83772 -34.46272 -32.23632 -31.61717 -29.88998 -28.52357 -27.03220 -26.77972 -26.13417 -23.82139 -22.71746 -22.18971 -21.72635 -20.54821 -19.85665 -18.66922 -18.58299 -18.31047 -18.18785 -17.86242 -17.60372 -17.56029 -16.73411 -16.69610 -16.42891 -16.27554 -15.88259 -15.71651 -15.57086 -15.41912 -15.20458 -14.60296 -14.33546 -14.21650 -14.04020 -13.74418 -13.60012 -13.54957 -13.39288 -12.82898 -12.52850 -12.40611 -12.32872 -12.28021 -12.24868 -12.12339 -11.84258 -11.75029 -11.10191 -10.93537 -10.68853 -10.32846 -10.20479 -9.89883 -9.03309 -4.90750 0.03588 0.10039 1.31911 1.34858 1.38674 1.56381 1.67735 1.99024 2.21524 2.39624 2.43138 2.68355 3.32922 3.35235 3.38804 3.46741 3.63846 3.67460 3.70802 3.83109 3.84500 3.91162 4.00269 4.10079 4.15796 4.22365 4.27565 4.29888 4.46535 4.48062 4.51356 4.62862 4.64661 4.68487 4.84757 4.85109 4.92482 4.93846 5.05875 5.22442 5.40520 5.44485 5.85055 5.86074 6.32205 6.42428 6.43722 6.91468 7.04075 7.30608 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.018 3.982 2 O -0.330 6.330 3 C 0.085 3.915 4 C 0.085 3.915 5 O -0.308 6.308 6 C 0.031 3.969 7 C 0.517 3.483 8 O -0.566 6.566 9 N -0.701 5.701 10 C 0.121 3.879 11 H 0.110 0.890 12 C -0.120 4.120 13 C -0.130 4.130 14 H 0.144 0.856 15 C 0.525 3.475 16 N -0.839 5.839 17 O -0.593 6.593 18 C -0.127 4.127 19 C -0.161 4.161 20 C -0.134 4.134 21 C -0.085 4.085 22 C -0.080 4.080 23 O -0.565 6.565 24 Si 0.778 3.222 25 C -0.147 4.147 26 H 0.064 0.936 27 H 0.115 0.885 28 H 0.068 0.932 29 H 0.122 0.878 30 H 0.124 0.876 31 H 0.419 0.581 32 H 0.088 0.912 33 H 0.094 0.906 34 H 0.418 0.582 35 H 0.405 0.595 36 H 0.089 0.911 37 H 0.091 0.909 38 H 0.170 0.830 39 H 0.131 0.869 40 H 0.095 0.905 41 H 0.404 0.596 42 H -0.284 1.284 43 H -0.295 1.295 44 H 0.154 0.846 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.865 3.567 3.262 4.911 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.076 4.076 2 O -0.245 6.245 3 C 0.039 3.961 4 C 0.039 3.961 5 O -0.222 6.222 6 C -0.047 4.047 7 C 0.303 3.697 8 O -0.444 6.444 9 N -0.354 5.354 10 C 0.016 3.984 11 H 0.128 0.872 12 C -0.159 4.159 13 C -0.152 4.152 14 H 0.162 0.838 15 C 0.310 3.690 16 N -0.401 5.401 17 O -0.474 6.474 18 C -0.166 4.166 19 C -0.179 4.179 20 C -0.152 4.152 21 C -0.085 4.085 22 C -0.189 4.189 23 O -0.375 6.375 24 Si 0.683 3.317 25 C -0.165 4.165 26 H 0.082 0.918 27 H 0.133 0.867 28 H 0.087 0.913 29 H 0.140 0.860 30 H 0.142 0.858 31 H 0.257 0.743 32 H 0.107 0.893 33 H 0.113 0.887 34 H 0.249 0.751 35 H 0.236 0.764 36 H 0.108 0.892 37 H 0.110 0.890 38 H 0.187 0.813 39 H 0.148 0.852 40 H 0.113 0.887 41 H 0.255 0.745 42 H -0.211 1.211 43 H -0.222 1.222 44 H 0.171 0.829 Dipole moment (debyes) X Y Z Total from point charges 0.029 2.766 2.784 3.925 hybrid contribution 0.344 -0.511 0.391 0.729 sum 0.373 2.255 3.175 3.912 Atomic orbital electron populations 1.23350 0.76438 1.05509 1.02319 1.86196 1.23351 1.26047 1.88861 1.18632 0.89679 0.85875 1.01874 1.18482 0.88466 0.86187 1.02933 1.86219 1.18096 1.28562 1.89275 1.22787 0.79454 0.95727 1.06694 1.20429 0.83095 0.90569 0.75579 1.90762 1.63968 1.39820 1.49859 1.45704 1.05059 1.10213 1.74462 1.22528 0.92992 0.85500 0.97388 0.87203 1.23227 0.93349 1.00626 0.98692 1.22591 0.90750 1.03259 0.98575 0.83845 1.20732 0.88182 0.80821 0.79242 1.43822 1.23143 1.35066 1.38102 1.90743 1.60721 1.33190 1.62698 1.23364 0.94720 1.01638 0.96892 1.21252 1.01953 0.89583 1.05149 1.20787 0.93285 0.98169 1.02979 1.19493 0.93353 0.94585 1.01099 1.24864 1.00345 1.02052 0.91645 1.86442 1.59261 1.49562 1.42224 0.94313 0.78703 0.82185 0.76502 1.21067 1.00993 0.90007 1.04470 0.91756 0.86722 0.91307 0.86012 0.85823 0.74302 0.89325 0.88732 0.75079 0.76388 0.89230 0.89014 0.81260 0.85168 0.88727 0.74484 1.21091 1.22236 0.82892 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 0.05 9.81 113.37 1.11 1.16 16 2 O -0.33 -4.03 10.28 -79.60 -0.82 -4.85 16 3 C 0.09 0.92 6.70 22.57 0.15 1.07 16 4 C 0.08 0.80 6.70 22.57 0.15 0.96 16 5 O -0.31 -3.46 9.45 -67.02 -0.63 -4.10 16 6 C 0.03 0.03 5.22 71.24 0.37 0.40 16 7 C 0.52 2.66 7.91 87.66 0.69 3.35 16 8 O -0.57 -9.12 16.10 15.99 0.26 -8.86 16 9 N -0.70 1.38 5.35 -440.05 -2.36 -0.98 16 10 C 0.12 -0.20 4.24 45.52 0.19 -0.01 16 11 H 0.11 0.17 7.46 -2.39 -0.02 0.16 16 12 C -0.12 0.33 7.15 31.12 0.22 0.55 16 13 C -0.13 0.58 4.15 -11.01 -0.05 0.54 16 14 H 0.14 -1.30 8.14 -2.39 -0.02 -1.32 16 15 C 0.52 0.30 7.63 87.65 0.67 0.97 16 16 N -0.84 5.06 8.87 -173.53 -1.54 3.52 16 17 O -0.59 -6.16 16.74 -3.06 -0.05 -6.21 16 18 C -0.13 0.53 7.43 31.12 0.23 0.76 16 19 C -0.16 -0.62 9.04 22.35 0.20 -0.42 16 20 C -0.13 -0.66 8.66 22.27 0.19 -0.46 16 21 C -0.08 -0.46 5.42 -19.86 -0.11 -0.57 16 22 C -0.08 0.07 2.81 71.23 0.20 0.27 16 23 O -0.56 0.36 12.75 -148.98 -1.90 -1.54 16 24 Si 0.78 -2.46 29.78 68.60 2.04 -0.42 16 25 C -0.15 -1.01 8.60 22.35 0.19 -0.81 16 26 H 0.06 0.05 7.67 -2.39 -0.02 0.03 16 27 H 0.11 -0.06 8.14 -2.39 -0.02 -0.08 16 28 H 0.07 -0.04 7.65 -2.39 -0.02 -0.05 16 29 H 0.12 -0.63 7.66 -2.39 -0.02 -0.65 16 30 H 0.12 -0.71 7.66 -2.39 -0.02 -0.73 16 31 H 0.42 -3.37 8.73 -92.71 -0.81 -4.18 16 32 H 0.09 -0.30 8.14 -2.38 -0.02 -0.32 16 33 H 0.09 -0.06 7.41 -2.39 -0.02 -0.07 16 34 H 0.42 -5.04 8.83 -92.70 -0.82 -5.86 16 35 H 0.41 -2.57 8.93 -92.71 -0.83 -3.40 16 36 H 0.09 -0.31 8.09 -2.39 -0.02 -0.33 16 37 H 0.09 -0.47 8.14 -2.39 -0.02 -0.49 16 38 H 0.17 -0.66 6.30 -2.91 -0.02 -0.68 16 39 H 0.13 0.33 4.87 -2.91 -0.01 0.32 16 40 H 0.09 -0.47 7.96 -2.39 -0.02 -0.49 16 41 H 0.40 -4.59 8.74 -74.06 -0.65 -5.24 16 42 H -0.28 -0.44 7.11 99.48 0.71 0.26 16 43 H -0.29 -1.23 7.11 99.48 0.71 -0.53 16 44 H 0.15 0.50 6.30 -2.91 -0.02 0.48 16 Total: 0.00 -36.31 371.86 -2.53 -38.84 By element: Atomic # 1 Polarization: -21.19 SS G_CDS: -1.96 Total: -23.16 kcal Atomic # 6 Polarization: 3.33 SS G_CDS: 4.43 Total: 7.76 kcal Atomic # 7 Polarization: 6.43 SS G_CDS: -3.90 Total: 2.54 kcal Atomic # 8 Polarization: -22.42 SS G_CDS: -3.14 Total: -25.57 kcal Atomic # 14 Polarization: -2.46 SS G_CDS: 2.04 Total: -0.42 kcal Total: -36.31 -2.53 -38.84 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_11684966_60476.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -84.151 kcal (2) G-P(sol) polarization free energy of solvation -36.306 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -120.457 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.533 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.839 kcal (6) G-S(sol) free energy of system = (1) + (5) -122.990 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.91 seconds