Wall clock time and date at job start Tue Mar 9 2021 12:58:37 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46498 * 1 3 3 N 1.28470 * 124.88356 * 2 1 4 4 C 1.31817 * 110.06964 * 180.02562 * 3 2 1 5 5 C 1.47684 * 126.51928 * 179.97438 * 4 3 2 6 6 O 1.21575 * 120.00320 * 179.97438 * 5 4 3 7 7 N 1.34785 * 119.99574 * 359.97438 * 5 4 3 8 8 C 1.39851 * 119.99624 * 175.38279 * 7 5 4 9 9 C 1.38894 * 120.06814 * 214.81702 * 8 7 5 10 10 C 1.38108 * 119.92521 * 179.74388 * 9 8 7 11 11 C 1.38292 * 120.07024 * 0.52792 * 10 9 8 12 12 C 1.50696 * 119.92596 * 179.76465 * 11 10 9 13 13 C 1.52998 * 109.47581 * 269.97966 * 12 11 10 14 14 Si 1.86297 * 109.47496 * 179.97438 * 13 12 11 15 15 C 1.86300 * 109.46962 * 60.00413 * 14 13 12 16 16 C 1.86307 * 109.47177 * 179.97438 * 14 13 12 17 17 C 1.86291 * 109.47165 * 300.00055 * 14 13 12 18 18 C 1.38279 * 120.14430 * 359.74643 * 11 10 9 19 19 C 1.38104 * 120.07631 * 359.97299 * 18 11 10 20 20 C 1.41505 * 106.96283 * 359.78550 * 4 3 2 21 21 C 1.35032 * 124.88276 * 180.02562 * 2 1 3 22 22 C 1.50699 * 126.38474 * 359.92992 * 21 2 1 23 23 O 1.42905 * 109.47211 * 29.99682 * 22 21 2 24 24 Si 1.86303 * 109.47057 * 149.99711 * 22 21 2 25 25 H 1.48495 * 109.47146 * 60.00159 * 24 22 21 26 26 H 1.48507 * 109.46854 * 180.02562 * 24 22 21 27 27 H 1.48499 * 109.47195 * 299.99754 * 24 22 21 28 28 H 1.08999 * 109.47112 * 269.95962 * 1 2 3 29 29 H 1.09007 * 109.47166 * 29.95791 * 1 2 3 30 30 H 1.08997 * 109.47434 * 149.95853 * 1 2 3 31 31 H 0.96995 * 120.00157 * 355.37360 * 7 5 4 32 32 H 1.07993 * 120.03599 * 359.97438 * 9 8 7 33 33 H 1.07997 * 119.96456 * 180.27326 * 10 9 8 34 34 H 1.09000 * 109.47460 * 29.97753 * 12 11 10 35 35 H 1.08999 * 109.47673 * 149.97680 * 12 11 10 36 36 H 1.09000 * 109.47057 * 300.00197 * 13 12 11 37 37 H 1.09006 * 109.47052 * 59.99863 * 13 12 11 38 38 H 1.08999 * 109.47917 * 59.99432 * 15 14 13 39 39 H 1.08996 * 109.47108 * 180.02562 * 15 14 13 40 40 H 1.09008 * 109.46627 * 299.99830 * 15 14 13 41 41 H 1.09003 * 109.46523 * 60.00025 * 16 14 13 42 42 H 1.08996 * 109.46837 * 179.97438 * 16 14 13 43 43 H 1.09000 * 109.46939 * 300.00548 * 16 14 13 44 44 H 1.09002 * 109.47394 * 60.00378 * 17 14 13 45 45 H 1.09010 * 109.47188 * 179.97438 * 17 14 13 46 46 H 1.08997 * 109.47346 * 299.99671 * 17 14 13 47 47 H 1.07999 * 119.96357 * 180.02562 * 18 11 10 48 48 H 1.07996 * 120.03735 * 180.02562 * 19 18 11 49 49 H 1.08002 * 127.25133 * 180.22278 * 20 4 3 50 50 H 1.08997 * 109.47323 * 269.99798 * 22 21 2 51 51 H 0.96705 * 113.99304 * 60.00267 * 23 22 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 7 2.1997 1.0539 0.0000 4 6 3.4741 0.7168 -0.0006 5 6 4.6272 1.6395 -0.0013 6 8 5.7596 1.1973 -0.0013 7 7 4.4240 2.9720 -0.0019 8 6 5.5120 3.8452 0.0949 9 6 5.3840 5.0425 0.7872 10 6 6.4620 5.9003 0.8854 11 6 7.6646 5.5732 0.2862 12 6 8.8372 6.5139 0.3910 13 6 8.8116 7.4938 -0.7837 14 14 10.2607 8.6573 -0.6537 15 6 11.8467 7.6808 -0.6943 16 6 10.2298 9.8500 -2.0846 17 6 10.1552 9.6042 0.9471 18 6 7.7937 4.3845 -0.4085 19 6 6.7214 3.5197 -0.5057 20 6 3.5271 -0.6972 0.0041 21 6 2.2372 -1.1077 -0.0005 22 6 1.7533 -2.5349 0.0004 23 8 0.4946 -2.6114 -0.6720 24 14 2.9935 -3.6117 -0.8789 25 1 4.3014 -3.5322 -0.1803 26 1 2.5162 -5.0180 -0.8786 27 1 3.1510 -3.1433 -2.2793 28 1 -0.3633 -0.0007 1.0276 29 1 -0.3634 0.8904 -0.5132 30 1 -0.3634 -0.8896 -0.5145 31 1 3.5232 3.3252 -0.0697 32 1 4.4437 5.3007 1.2512 33 1 6.3644 6.8293 1.4273 34 1 8.7759 7.0681 1.3277 35 1 9.7650 5.9424 0.3671 36 1 8.8728 6.9398 -1.7204 37 1 7.8838 8.0655 -0.7598 38 1 11.9085 7.1267 -1.6309 39 1 12.6945 8.3615 -0.6178 40 1 11.8650 6.9827 0.1427 41 1 9.3018 10.4214 -2.0613 42 1 11.0774 10.5310 -2.0083 43 1 10.2917 9.2956 -3.0211 44 1 10.1735 8.9062 1.7841 45 1 11.0033 10.2847 1.0234 46 1 9.2273 10.1756 0.9708 47 1 8.7344 4.1318 -0.8750 48 1 6.8230 2.5914 -1.0481 49 1 4.4107 -1.3183 0.0084 50 1 1.6376 -2.8787 1.0282 51 1 0.5227 -2.3202 -1.5937 RHF calculation, no. of doubly occupied orbitals= 65 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_11757974_13259642.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:58:37 Heat of formation + Delta-G solvation = -4.114945 kcal Electronic energy + Delta-G solvation = -28812.362131 eV Core-core repulsion = 24836.942819 eV Total energy + Delta-G solvation = -3975.419312 eV No. of doubly occupied orbitals = 65 Molecular weight (most abundant/longest-lived isotopes) = 361.173 amu Computer time = 0.97 seconds Orbital eigenvalues (eV) -43.94606 -41.52230 -39.67828 -38.13263 -36.44876 -34.57532 -33.87814 -32.66611 -31.89565 -29.92403 -29.20023 -28.33603 -28.25359 -28.24040 -26.78737 -25.14575 -23.92659 -23.67141 -22.33298 -21.75677 -20.92955 -19.43135 -18.48981 -17.74467 -17.62724 -17.18959 -16.70760 -16.47791 -16.06083 -15.93693 -15.73881 -15.48965 -15.25932 -14.87720 -14.73816 -14.43176 -14.37016 -14.21315 -14.03075 -13.85218 -13.74652 -13.68590 -13.58417 -13.46870 -13.20275 -13.06360 -12.94630 -12.90279 -12.63380 -12.58618 -12.45676 -12.29073 -12.07975 -11.83937 -11.68382 -11.45981 -11.17277 -10.88737 -10.67228 -10.62740 -10.36874 -10.27178 -10.02256 -9.88501 -9.00205 0.04388 0.45108 0.52358 0.73505 1.08751 1.45972 1.48775 1.60001 1.90576 1.96510 2.01463 2.06927 2.09450 2.13097 2.77995 2.85004 3.06237 3.24969 3.30583 3.85353 3.97925 4.04023 4.14306 4.26207 4.33765 4.36735 4.43630 4.48384 4.48694 4.51496 4.57112 4.62870 4.65851 4.78525 4.83957 4.84851 4.89245 4.89921 4.91440 4.92997 5.00020 5.07879 5.10667 5.19269 5.33219 5.35742 5.48048 5.55361 5.62133 5.64600 5.69455 5.71612 5.77531 6.06986 6.19979 6.44035 6.70558 6.91288 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.061 3.939 2 N -0.255 5.255 3 N -0.260 5.260 4 C -0.041 4.041 5 C 0.604 3.396 6 O -0.546 6.546 7 N -0.651 5.651 8 C 0.117 3.883 9 C -0.139 4.139 10 C -0.106 4.106 11 C -0.090 4.090 12 C -0.074 4.074 13 C -0.413 4.413 14 Si 1.082 2.918 15 C -0.468 4.468 16 C -0.469 4.469 17 C -0.464 4.464 18 C -0.113 4.113 19 C -0.136 4.136 20 C -0.199 4.199 21 C -0.008 4.008 22 C -0.043 4.043 23 O -0.538 6.538 24 Si 0.999 3.001 25 H -0.262 1.262 26 H -0.254 1.254 27 H -0.263 1.263 28 H 0.095 0.905 29 H 0.104 0.896 30 H 0.139 0.861 31 H 0.425 0.575 32 H 0.145 0.855 33 H 0.149 0.851 34 H 0.087 0.913 35 H 0.079 0.921 36 H 0.070 0.930 37 H 0.077 0.923 38 H 0.065 0.935 39 H 0.065 0.935 40 H 0.070 0.930 41 H 0.067 0.933 42 H 0.065 0.935 43 H 0.065 0.935 44 H 0.071 0.929 45 H 0.064 0.936 46 H 0.069 0.931 47 H 0.133 0.867 48 H 0.119 0.881 49 H 0.166 0.834 50 H 0.147 0.853 51 H 0.394 0.606 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.378 0.370 -0.260 5.397 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.077 4.077 2 N -0.044 5.044 3 N -0.099 5.099 4 C -0.198 4.198 5 C 0.391 3.609 6 O -0.422 6.422 7 N -0.296 5.296 8 C 0.023 3.977 9 C -0.159 4.159 10 C -0.124 4.124 11 C -0.091 4.091 12 C -0.111 4.111 13 C -0.497 4.497 14 Si 1.274 2.726 15 C -0.574 4.574 16 C -0.575 4.575 17 C -0.570 4.570 18 C -0.132 4.132 19 C -0.157 4.157 20 C -0.227 4.227 21 C -0.133 4.133 22 C -0.154 4.154 23 O -0.346 6.346 24 Si 0.821 3.179 25 H -0.186 1.186 26 H -0.178 1.178 27 H -0.187 1.187 28 H 0.113 0.887 29 H 0.123 0.877 30 H 0.157 0.843 31 H 0.264 0.736 32 H 0.162 0.838 33 H 0.167 0.833 34 H 0.105 0.895 35 H 0.097 0.903 36 H 0.089 0.911 37 H 0.096 0.904 38 H 0.084 0.916 39 H 0.084 0.916 40 H 0.089 0.911 41 H 0.086 0.914 42 H 0.085 0.915 43 H 0.084 0.916 44 H 0.090 0.910 45 H 0.084 0.916 46 H 0.088 0.912 47 H 0.151 0.849 48 H 0.137 0.863 49 H 0.183 0.817 50 H 0.164 0.836 51 H 0.244 0.756 Dipole moment (debyes) X Y Z Total from point charges -5.094 0.188 -0.118 5.098 hybrid contribution 0.040 -0.053 -0.381 0.387 sum -5.053 0.135 -0.499 5.080 Atomic orbital electron populations 1.23017 0.70108 1.08197 1.06392 1.45774 1.09198 1.01547 1.47891 1.73470 1.02385 1.15012 1.19028 1.21518 0.90748 0.94080 1.13479 1.17155 0.86860 0.81584 0.75267 1.90786 1.23695 1.77463 1.50239 1.43189 1.10256 1.04621 1.71562 1.17898 0.88435 0.91842 0.99494 1.21146 1.01076 0.93958 0.99729 1.21171 0.91733 0.99956 0.99542 1.20277 0.96581 0.95076 0.97156 1.20346 0.95193 0.95818 0.99738 1.26363 1.15465 1.07828 1.00038 0.78095 0.64666 0.64695 0.65181 1.26377 1.17399 1.09292 1.04336 1.26366 1.04240 1.11786 1.15116 1.26312 1.04347 1.08925 1.17435 1.21131 0.98619 0.93888 0.99514 1.21270 0.93363 1.00547 1.00475 1.21694 0.97679 0.93534 1.09755 1.22226 0.90495 0.92693 1.07926 1.24742 0.94178 0.91178 1.05279 1.86471 1.29115 1.88549 1.30417 0.84968 0.76198 0.77881 0.78830 1.18617 1.17761 1.18688 0.88695 0.87746 0.84312 0.73643 0.83763 0.83332 0.89455 0.90269 0.91067 0.90425 0.91594 0.91614 0.91114 0.91365 0.91528 0.91621 0.90960 0.91638 0.91193 0.84906 0.86309 0.81674 0.83578 0.75562 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 -0.48 11.00 127.77 1.41 0.93 16 2 N -0.25 -0.03 3.70 -355.93 -1.32 -1.34 16 3 N -0.26 -1.28 11.68 -48.19 -0.56 -1.84 16 4 C -0.04 -0.34 7.13 42.45 0.30 -0.04 16 5 C 0.60 6.92 7.67 86.74 0.67 7.58 16 6 O -0.55 -9.51 14.36 -3.95 -0.06 -9.57 16 7 N -0.65 -4.61 5.33 -306.22 -1.63 -6.25 16 8 C 0.12 0.98 6.30 38.18 0.24 1.22 16 9 C -0.14 -0.56 9.97 22.40 0.22 -0.34 16 10 C -0.11 -0.27 9.69 22.25 0.22 -0.06 16 11 C -0.09 -0.33 5.14 -19.84 -0.10 -0.44 16 12 C -0.07 0.10 4.71 29.85 0.14 0.24 16 13 C -0.41 1.18 4.43 71.98 0.32 1.50 16 14 Si 1.08 -5.79 12.19 68.60 0.84 -4.95 16 15 C -0.47 1.14 8.65 113.37 0.98 2.12 16 16 C -0.47 1.00 8.65 113.37 0.98 1.98 16 17 C -0.46 1.65 8.65 113.37 0.98 2.63 16 18 C -0.11 -0.78 9.69 22.25 0.22 -0.57 16 19 C -0.14 -1.46 8.70 22.39 0.19 -1.26 16 20 C -0.20 -1.11 9.35 22.41 0.21 -0.90 16 21 C -0.01 0.00 6.17 41.40 0.26 0.25 16 22 C -0.04 0.24 2.99 71.24 0.21 0.45 16 23 O -0.54 4.37 10.02 -148.98 -1.49 2.87 16 24 Si 1.00 -3.46 26.64 68.60 1.83 -1.63 16 25 H -0.26 0.08 6.87 99.48 0.68 0.76 16 26 H -0.25 0.52 7.11 99.48 0.71 1.23 16 27 H -0.26 0.29 7.11 99.48 0.71 1.00 16 28 H 0.09 -0.84 8.14 -2.39 -0.02 -0.86 16 29 H 0.10 -0.99 8.14 -2.38 -0.02 -1.01 16 30 H 0.14 -1.59 5.00 -2.39 -0.01 -1.60 16 31 H 0.43 1.01 8.55 -92.71 -0.79 0.22 16 32 H 0.14 -0.10 8.06 -2.91 -0.02 -0.13 16 33 H 0.15 -0.36 8.06 -2.91 -0.02 -0.39 16 34 H 0.09 -0.35 7.73 -2.39 -0.02 -0.37 16 35 H 0.08 -0.19 7.74 -2.39 -0.02 -0.20 16 36 H 0.07 -0.11 7.96 -2.39 -0.02 -0.12 16 37 H 0.08 -0.22 7.96 -2.38 -0.02 -0.24 16 38 H 0.06 -0.12 7.96 -2.39 -0.02 -0.13 16 39 H 0.06 -0.12 7.96 -2.39 -0.02 -0.14 16 40 H 0.07 -0.18 7.79 -2.38 -0.02 -0.20 16 41 H 0.07 -0.14 7.96 -2.39 -0.02 -0.16 16 42 H 0.07 -0.11 7.96 -2.39 -0.02 -0.13 16 43 H 0.06 -0.10 7.96 -2.39 -0.02 -0.12 16 44 H 0.07 -0.28 7.79 -2.39 -0.02 -0.30 16 45 H 0.06 -0.18 7.96 -2.38 -0.02 -0.20 16 46 H 0.07 -0.25 7.96 -2.39 -0.02 -0.27 16 47 H 0.13 0.53 8.06 -2.91 -0.02 0.51 16 48 H 0.12 1.66 6.22 -2.91 -0.02 1.64 16 49 H 0.17 0.83 6.87 -2.91 -0.02 0.81 16 50 H 0.15 -1.22 7.96 -2.39 -0.02 -1.24 16 51 H 0.39 -5.44 8.39 -74.05 -0.62 -6.06 16 Total: 0.00 -20.42 420.06 5.30 -15.11 By element: Atomic # 1 Polarization: -7.97 SS G_CDS: 0.26 Total: -7.71 kcal Atomic # 6 Polarization: 7.87 SS G_CDS: 7.44 Total: 15.31 kcal Atomic # 7 Polarization: -5.92 SS G_CDS: -3.51 Total: -9.43 kcal Atomic # 8 Polarization: -5.14 SS G_CDS: -1.55 Total: -6.69 kcal Atomic # 14 Polarization: -9.25 SS G_CDS: 2.66 Total: -6.58 kcal Total: -20.42 5.30 -15.11 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_11757974_13259642.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 10.999 kcal (2) G-P(sol) polarization free energy of solvation -20.418 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -9.419 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 5.304 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.114 kcal (6) G-S(sol) free energy of system = (1) + (5) -4.115 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.97 seconds