Wall clock time and date at job start Tue Mar 9 2021 12:58:47 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46906 * 1 3 3 H 1.00900 * 109.46743 * 2 1 4 4 C 1.46892 * 109.47035 * 239.99302 * 2 1 3 5 5 C 1.46898 * 109.46989 * 119.99268 * 2 1 3 6 6 H 1.08998 * 112.85040 * 48.80705 * 5 2 1 7 7 C 1.53786 * 113.61477 * 180.02562 * 5 2 1 8 8 C 1.53775 * 87.08098 * 139.98026 * 7 5 2 9 9 H 1.09001 * 113.61159 * 89.20340 * 8 7 5 10 10 C 1.53003 * 113.61339 * 220.01817 * 8 7 5 11 11 N 1.46504 * 109.47304 * 185.00609 * 10 8 7 12 12 C 1.34770 * 120.00057 * 180.02562 * 11 10 8 13 13 O 1.21594 * 120.00254 * 359.97438 * 12 11 10 14 14 C 1.47573 * 120.00026 * 179.97438 * 12 11 10 15 15 C 1.36501 * 120.01215 * 179.72316 * 14 12 11 16 16 N 1.35943 * 120.50569 * 179.71818 * 15 14 12 17 17 C 1.37003 * 132.41371 * 180.20425 * 16 15 14 18 18 C 1.50696 * 126.42898 * 0.33800 * 17 16 15 19 19 O 1.42900 * 109.47180 * 30.00153 * 18 17 16 20 20 Si 1.86298 * 109.47298 * 150.00450 * 18 17 16 21 21 C 1.35007 * 107.14412 * 180.32307 * 17 16 15 22 22 N 1.33586 * 108.65209 * 359.97438 * 21 17 16 23 23 C 1.32419 * 109.22503 * 0.02562 * 22 21 17 24 24 C 1.41250 * 132.11367 * 179.97438 * 23 22 21 25 25 Br 1.89104 * 120.25522 * 359.97438 * 24 23 22 26 26 C 1.35705 * 119.48915 * 179.97438 * 24 23 22 27 27 C 1.53777 * 87.08629 * 334.56938 * 8 7 5 28 28 H 1.09001 * 109.46544 * 180.02562 * 1 2 3 29 29 H 1.09001 * 109.47272 * 300.00235 * 1 2 3 30 30 H 1.09000 * 109.47033 * 60.00684 * 1 2 3 31 31 H 1.09000 * 109.47198 * 60.00115 * 4 2 1 32 32 H 1.09002 * 109.46854 * 179.97438 * 4 2 1 33 33 H 1.08993 * 109.47666 * 299.99760 * 4 2 1 34 34 H 1.08996 * 113.61051 * 254.53359 * 7 5 2 35 35 H 1.09003 * 113.61206 * 25.34272 * 7 5 2 36 36 H 1.09010 * 109.47009 * 304.99888 * 10 8 7 37 37 H 1.08992 * 109.47422 * 65.00180 * 10 8 7 38 38 H 0.96997 * 119.99567 * 359.97438 * 11 10 8 39 39 H 1.08001 * 119.74172 * 359.97438 * 15 14 12 40 40 H 1.09006 * 109.47465 * 270.00620 * 18 17 16 41 41 H 0.96706 * 113.99752 * 60.00092 * 19 18 17 42 42 H 1.48495 * 110.00033 * 179.97438 * 20 18 17 43 43 H 1.48498 * 109.99849 * 301.32232 * 20 18 17 44 44 H 1.07999 * 125.67337 * 179.97438 * 21 17 16 45 45 H 1.07994 * 120.23629 * 179.97438 * 26 24 23 46 46 H 1.09005 * 113.61106 * 270.88509 * 27 8 7 47 47 H 1.08994 * 113.61419 * 139.98399 * 27 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4691 0.0000 0.0000 3 1 1.8053 0.9513 0.0000 4 6 1.9587 -0.6926 -1.1993 5 6 1.9587 -0.6923 1.1995 6 1 1.4761 -1.6567 1.3583 7 6 3.4925 -0.7474 1.2961 8 6 3.3290 -0.4759 2.8008 9 1 3.2227 -1.3810 3.3988 10 6 4.3718 0.4905 3.3661 11 7 4.2077 0.5913 4.8185 12 6 5.0219 1.3915 5.5347 13 8 5.8930 2.0296 4.9756 14 6 4.8563 1.4934 6.9975 15 6 5.6844 2.2996 7.7239 16 7 5.5371 2.4054 9.0712 17 6 6.2115 3.1270 10.0206 18 6 7.3707 4.0594 9.7799 19 8 7.2562 4.6352 8.4771 20 14 7.3557 5.4123 11.0605 21 6 5.6426 2.8463 11.2124 22 7 4.6456 1.9791 11.0162 23 6 4.5617 1.6960 9.7253 24 6 3.6969 0.8508 8.9952 25 35 2.3496 -0.1326 9.8860 26 6 3.8405 0.7500 7.6495 27 6 1.9901 0.1964 2.4542 28 1 -0.3632 -1.0277 0.0005 29 1 -0.3634 0.5139 0.8900 30 1 -0.3633 0.5137 -0.8900 31 1 1.5954 -0.1789 -2.0893 32 1 3.0487 -0.6922 -1.1995 33 1 1.5954 -1.7202 -1.1992 34 1 3.9091 -1.7294 1.0723 35 1 3.9930 0.0574 0.7576 36 1 5.3715 0.1203 3.1383 37 1 4.2374 1.4741 2.9162 38 1 3.5126 0.0825 5.2644 39 1 6.4599 2.8608 7.2238 40 1 8.3054 3.5029 9.8502 41 1 6.4462 5.1463 8.3428 42 1 8.4944 6.3383 10.8344 43 1 6.0733 6.1583 10.9962 44 1 5.9434 3.2549 12.1657 45 1 3.1862 0.1071 7.0795 46 1 2.0799 1.2601 2.2336 47 1 1.1940 -0.0237 3.1653 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_11760412_12335884.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:58:47 Heat of formation + Delta-G solvation = 165.862714 kcal Electronic energy + Delta-G solvation = -30308.440514 eV Core-core repulsion = 26046.161436 eV Total energy + Delta-G solvation = -4262.279078 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 410.087 amu Computer time = 1.00 seconds Orbital eigenvalues (eV) -44.30169 -42.58712 -41.17865 -38.74154 -38.39773 -38.08569 -35.78460 -35.17642 -32.74228 -31.88719 -30.32574 -29.63583 -29.50082 -26.97647 -26.75036 -26.49048 -25.31962 -24.13074 -23.61023 -22.60722 -22.02582 -21.26158 -19.59928 -18.99293 -18.51796 -18.31937 -17.90296 -17.63888 -17.53470 -17.15203 -17.05344 -16.64839 -16.26581 -16.21729 -15.97479 -15.82874 -15.43161 -14.86668 -14.71147 -14.64199 -14.15960 -13.91272 -13.84104 -13.66185 -13.54075 -13.46653 -13.38749 -13.23648 -13.13811 -13.06750 -12.84854 -12.79929 -12.21364 -12.18726 -11.90691 -11.59848 -11.53753 -11.41893 -11.39401 -11.29420 -11.11495 -10.34776 -10.04249 -9.13279 -4.97955 -0.94817 -0.41306 0.16733 0.91581 1.00211 1.09248 1.37070 1.61681 1.77095 1.87093 1.97443 2.18852 2.59634 2.78728 2.90486 2.94284 2.98476 3.10965 3.32628 3.38684 3.41411 3.42665 3.51779 3.59941 3.69787 3.82593 4.05274 4.14234 4.20495 4.26245 4.27022 4.32646 4.34665 4.38552 4.39886 4.43233 4.45372 4.56654 4.69585 4.76716 4.79085 4.83550 4.85721 4.90473 4.92473 5.01524 5.17197 5.27674 5.33238 5.53551 6.13262 6.24163 6.46070 6.93101 Molecular weight = 410.09amu Principal moments of inertia in cm(-1) A = 0.009006 B = 0.002190 C = 0.001824 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 3108.262384 B =12784.582414 C =15350.370475 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.047 4.047 2 N -0.367 5.367 3 H 0.435 0.565 4 C -0.049 4.049 5 C 0.020 3.980 6 H 0.172 0.828 7 C -0.138 4.138 8 C -0.122 4.122 9 H 0.119 0.881 10 C 0.122 3.878 11 N -0.704 5.704 12 C 0.579 3.421 13 O -0.568 6.568 14 C -0.171 4.171 15 C 0.152 3.848 16 N -0.360 5.360 17 C -0.089 4.089 18 C -0.046 4.046 19 O -0.545 6.545 20 Si 0.806 3.194 21 C 0.043 3.957 22 N -0.497 5.497 23 C 0.223 3.777 24 C -0.083 4.083 25 Br 0.005 6.995 26 C -0.019 4.019 27 C -0.144 4.144 28 H 0.121 0.879 29 H 0.122 0.878 30 H 0.125 0.875 31 H 0.126 0.874 32 H 0.120 0.880 33 H 0.121 0.879 34 H 0.101 0.899 35 H 0.115 0.885 36 H 0.060 0.940 37 H 0.077 0.923 38 H 0.417 0.583 39 H 0.187 0.813 40 H 0.138 0.862 41 H 0.386 0.614 42 H -0.292 1.292 43 H -0.289 1.289 44 H 0.223 0.777 45 H 0.194 0.806 46 H 0.113 0.887 47 H 0.105 0.895 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -14.764 -9.287 -33.766 38.005 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.188 4.188 2 N 0.056 4.944 3 H 0.272 0.728 4 C -0.191 4.191 5 C -0.082 4.082 6 H 0.190 0.810 7 C -0.176 4.176 8 C -0.142 4.142 9 H 0.137 0.863 10 C 0.000 4.000 11 N -0.357 5.357 12 C 0.365 3.635 13 O -0.448 6.448 14 C -0.179 4.179 15 C 0.025 3.975 16 N -0.033 5.033 17 C -0.200 4.200 18 C -0.155 4.155 19 O -0.352 6.352 20 Si 0.708 3.292 21 C -0.106 4.106 22 N -0.216 5.216 23 C -0.022 4.022 24 C -0.165 4.165 25 Br 0.091 6.909 26 C -0.045 4.045 27 C -0.181 4.181 28 H 0.140 0.860 29 H 0.140 0.860 30 H 0.143 0.857 31 H 0.145 0.855 32 H 0.138 0.862 33 H 0.140 0.860 34 H 0.120 0.880 35 H 0.133 0.867 36 H 0.079 0.921 37 H 0.095 0.905 38 H 0.256 0.744 39 H 0.204 0.796 40 H 0.156 0.844 41 H 0.236 0.764 42 H -0.219 1.219 43 H -0.215 1.215 44 H 0.240 0.760 45 H 0.211 0.789 46 H 0.131 0.869 47 H 0.124 0.876 Dipole moment (debyes) X Y Z Total from point charges -14.706 -9.193 -33.136 37.400 hybrid contribution 0.388 0.962 -1.152 1.550 sum -14.318 -8.231 -34.288 38.058 Atomic orbital electron populations 1.24098 0.75669 1.09584 1.09497 1.45042 1.16108 1.18933 1.14343 0.72800 1.24097 1.05653 1.02627 0.86729 1.24957 0.98059 1.01119 0.84099 0.81016 1.23502 0.92786 1.06267 0.95030 1.22631 0.94570 0.99494 0.97472 0.86292 1.21593 1.00011 1.00414 0.78014 1.45669 1.35273 1.45661 1.09093 1.17455 0.81440 0.79672 0.84972 1.90880 1.35211 1.46587 1.72077 1.19359 1.00167 1.03393 0.94975 1.22293 0.98441 0.96085 0.80651 1.42729 1.23970 1.29965 1.06632 1.22322 1.03602 1.05419 0.88671 1.25047 0.96536 1.00512 0.93385 1.86588 1.47237 1.70670 1.30753 0.93375 0.77045 0.75329 0.83499 1.22992 0.92400 0.96498 0.98683 1.70851 1.21158 1.17619 1.11946 1.20838 0.93613 0.98651 0.89088 1.20663 0.99170 1.02115 0.94568 1.96873 1.45374 1.69295 1.79373 1.21370 0.95724 0.96227 0.91196 1.23688 0.98321 1.00294 0.95811 0.86043 0.85996 0.85662 0.85530 0.86158 0.86041 0.87994 0.86712 0.92147 0.90509 0.74430 0.79587 0.84420 0.76429 1.21891 1.21500 0.76032 0.78883 0.86878 0.87619 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.05 2.97 9.15 127.69 1.17 4.14 16 2 N -0.37 24.16 0.62 -920.15 -0.57 23.59 16 3 H 0.43 -29.88 8.19 -89.69 -0.73 -30.61 16 4 C -0.05 3.11 8.99 127.69 1.15 4.25 16 5 C 0.02 -1.23 2.92 45.45 0.13 -1.10 16 6 H 0.17 -10.80 8.11 -2.39 -0.02 -10.82 16 7 C -0.14 7.56 6.15 31.12 0.19 7.75 16 8 C -0.12 6.03 3.75 -10.27 -0.04 5.99 16 9 H 0.12 -5.81 8.14 -2.39 -0.02 -5.83 16 10 C 0.12 -4.67 5.51 86.38 0.48 -4.19 16 11 N -0.70 23.28 5.51 -466.22 -2.57 20.71 16 12 C 0.58 -12.71 7.76 86.71 0.67 -12.04 16 13 O -0.57 7.41 16.27 -4.01 -0.07 7.34 16 14 C -0.17 3.42 5.84 -20.35 -0.12 3.30 16 15 C 0.15 -2.26 9.91 83.65 0.83 -1.43 16 16 N -0.36 4.23 2.93 -337.71 -0.99 3.24 16 17 C -0.09 1.14 6.24 41.01 0.26 1.40 16 18 C -0.05 0.73 3.06 71.23 0.22 0.95 16 19 O -0.55 7.46 10.91 -148.98 -1.63 5.83 16 20 Si 0.81 -13.22 31.18 68.60 2.14 -11.08 16 21 C 0.04 -0.51 10.44 83.68 0.87 0.36 16 22 N -0.50 3.13 11.30 -194.11 -2.19 0.94 16 23 C 0.22 -2.09 7.59 134.19 1.02 -1.07 16 24 C -0.08 1.23 6.24 22.42 0.14 1.37 16 25 Br 0.01 -0.08 33.72 -20.37 -0.69 -0.77 16 26 C -0.02 0.44 9.26 22.55 0.21 0.65 16 27 C -0.14 8.00 7.11 31.12 0.22 8.22 16 28 H 0.12 -7.64 8.13 -2.39 -0.02 -7.66 16 29 H 0.12 -7.67 8.00 -2.39 -0.02 -7.69 16 30 H 0.12 -7.91 8.14 -2.39 -0.02 -7.93 16 31 H 0.13 -7.96 8.14 -2.39 -0.02 -7.98 16 32 H 0.12 -7.47 7.13 -2.39 -0.02 -7.48 16 33 H 0.12 -7.57 8.14 -2.39 -0.02 -7.59 16 34 H 0.10 -5.37 8.14 -2.39 -0.02 -5.39 16 35 H 0.11 -6.41 8.00 -2.39 -0.02 -6.43 16 36 H 0.06 -1.99 8.14 -2.38 -0.02 -2.01 16 37 H 0.08 -2.90 7.84 -2.39 -0.02 -2.92 16 38 H 0.42 -16.29 6.51 -92.71 -0.60 -16.89 16 39 H 0.19 -2.60 6.20 -2.91 -0.02 -2.62 16 40 H 0.14 -2.43 7.96 -2.38 -0.02 -2.45 16 41 H 0.39 -7.05 8.70 -74.05 -0.64 -7.70 16 42 H -0.29 2.58 7.11 99.48 0.71 3.29 16 43 H -0.29 3.09 7.11 99.48 0.71 3.80 16 44 H 0.22 -4.27 6.90 -2.91 -0.02 -4.29 16 45 H 0.19 -6.33 6.44 -2.91 -0.02 -6.35 16 46 H 0.11 -6.37 7.70 -2.38 -0.02 -6.39 16 47 H 0.11 -5.77 8.14 -2.39 -0.02 -5.79 16 Total: 1.00 -87.29 399.40 -0.08 -87.36 By element: Atomic # 1 Polarization: -154.82 SS G_CDS: -0.91 Total: -155.73 kcal Atomic # 6 Polarization: 11.16 SS G_CDS: 7.40 Total: 18.56 kcal Atomic # 7 Polarization: 54.80 SS G_CDS: -6.32 Total: 48.48 kcal Atomic # 8 Polarization: 14.87 SS G_CDS: -1.69 Total: 13.18 kcal Atomic # 14 Polarization: -13.22 SS G_CDS: 2.14 Total: -11.08 kcal Atomic # 35 Polarization: -0.08 SS G_CDS: -0.69 Total: -0.77 kcal Total: -87.29 -0.08 -87.36 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_11760412_12335884.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 253.226 kcal (2) G-P(sol) polarization free energy of solvation -87.287 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 165.938 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.075 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -87.363 kcal (6) G-S(sol) free energy of system = (1) + (5) 165.863 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.00 seconds