Wall clock time and date at job start Tue Mar 9 2021 12:58:53 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 Si 1.86302 * 1 3 3 C 1.86298 * 109.47154 * 2 1 4 4 C 1.86303 * 109.46954 * 239.99941 * 2 1 3 5 5 C 1.90003 * 109.47226 * 119.99989 * 2 1 3 6 6 C 3.07397 * 109.47177 * 120.00193 * 2 1 3 7 7 C 4.54599 * 109.47152 * 120.00043 * 2 1 3 8 8 C 1.53002 * 109.47118 * 270.40526 * 7 6 5 9 9 N 1.46496 * 109.47264 * 180.02562 * 8 7 6 10 10 C 1.34775 * 120.00155 * 180.02562 * 9 8 7 11 11 O 1.21592 * 120.00130 * 0.02562 * 10 9 8 12 12 C 1.47581 * 119.99955 * 180.02562 * 10 9 8 13 13 C 1.36495 * 120.00506 * 180.02562 * 12 10 9 14 14 N 1.35950 * 120.49933 * 179.97438 * 13 12 10 15 15 C 1.37007 * 132.40926 * 179.97438 * 14 13 12 16 16 C 1.50696 * 126.42551 * 359.97438 * 15 14 13 17 17 O 1.42903 * 109.47389 * 329.71040 * 16 15 14 18 18 Si 1.86301 * 109.46719 * 209.71287 * 16 15 14 19 19 H 1.48506 * 109.47302 * 179.97438 * 18 16 15 20 20 H 1.48503 * 109.47334 * 60.00029 * 18 16 15 21 21 H 1.48500 * 109.47376 * 300.00026 * 18 16 15 22 22 C 1.35004 * 107.13784 * 179.73601 * 15 14 13 23 23 N 1.33577 * 108.66018 * 0.26001 * 22 15 14 24 24 C 1.32412 * 109.22246 * 0.02562 * 23 22 15 25 25 C 1.41261 * 132.11803 * 180.02562 * 24 23 22 26 26 Br 1.89093 * 120.25378 * 359.95475 * 25 24 23 27 27 C 1.35701 * 119.48700 * 179.26228 * 25 24 23 28 28 H 1.09005 * 109.46851 * 299.99877 * 1 2 3 29 29 H 1.09001 * 109.47086 * 59.99997 * 1 2 3 30 30 H 1.08997 * 109.47098 * 180.02562 * 1 2 3 31 31 H 1.08995 * 109.47355 * 180.02562 * 3 2 1 32 32 H 1.09001 * 109.47126 * 299.99978 * 3 2 1 33 33 H 1.08995 * 109.47015 * 59.99789 * 3 2 1 34 34 H 1.08997 * 109.47104 * 299.99857 * 4 2 1 35 35 H 1.09001 * 109.47174 * 60.00115 * 4 2 1 36 36 H 1.08995 * 109.47043 * 179.97438 * 4 2 1 37 37 H 1.09005 * 109.46930 * 150.41142 * 7 6 5 38 38 H 1.08997 * 109.47739 * 30.41008 * 7 6 5 39 39 H 1.08997 * 109.46872 * 60.00202 * 8 7 6 40 40 H 1.08997 * 109.47209 * 300.00806 * 8 7 6 41 41 H 0.97002 * 119.99713 * 0.02562 * 9 8 7 42 42 H 1.07997 * 119.75153 * 359.97438 * 13 12 10 43 43 H 1.09001 * 109.47332 * 89.71677 * 16 15 14 44 44 H 0.96698 * 113.99836 * 180.02562 * 17 16 15 45 45 H 1.08002 * 125.66765 * 180.28396 * 22 15 14 46 46 H 1.08005 * 120.23561 * 180.21466 * 27 25 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 14 1.8630 0.0000 0.0000 3 6 2.4840 1.7564 0.0000 4 6 2.4840 -0.8783 -1.5212 5 6 2.4964 -0.8957 1.5514 6 6 2.8877 -1.4492 2.5098 7 6 3.3784 -2.1430 3.7118 8 6 2.8600 -1.4277 4.9610 9 7 3.3488 -2.1178 6.1572 10 6 3.0161 -1.6624 7.3812 11 8 2.3099 -0.6789 7.4927 12 6 3.5090 -2.3573 8.5862 13 6 3.1717 -1.8964 9.8260 14 7 3.6197 -2.5292 10.9427 15 6 3.4381 -2.2852 12.2786 16 6 2.6319 -1.1641 12.8820 17 8 2.6619 -0.0327 12.0096 18 14 3.3585 -0.6951 14.5322 19 1 2.5645 0.4101 15.1266 20 1 4.7631 -0.2505 14.3463 21 1 3.3274 -1.8708 15.4388 22 6 4.1125 -3.2408 12.9528 23 7 4.7012 -4.0521 12.0699 24 6 4.4207 -3.6388 10.8436 25 6 4.7860 -4.1314 9.5710 26 35 5.8820 -5.6650 9.4217 27 6 4.3327 -3.5038 8.4565 28 1 -0.3633 0.5138 0.8901 29 1 -0.3633 0.5138 -0.8900 30 1 -0.3633 -1.0276 0.0005 31 1 3.5740 1.7565 -0.0005 32 1 2.1207 2.2703 -0.8900 33 1 2.1207 2.2702 0.8899 34 1 2.1207 -1.9059 -1.5211 35 1 2.1207 -0.3644 -2.4112 36 1 3.5739 -0.8779 -1.5214 37 1 4.4684 -2.1366 3.7155 38 1 3.0212 -3.1728 3.7082 39 1 1.7701 -1.4340 4.9573 40 1 3.2172 -0.3979 4.9645 41 1 3.9119 -2.9026 6.0682 42 1 2.5442 -1.0226 9.9204 43 1 1.6009 -1.4905 13.0185 44 1 2.1626 0.7286 12.3355 45 1 4.1667 -3.3341 14.0274 46 1 4.6017 -3.8721 7.4775 RHF calculation, no. of doubly occupied orbitals= 64 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_22_11968232_12335884.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:58:53 Heat of formation + Delta-G solvation = 25.220954 kcal Electronic energy + Delta-G solvation = -28005.683584 eV Core-core repulsion = 23874.567467 eV Total energy + Delta-G solvation = -4131.116117 eV No. of doubly occupied orbitals = 64 Molecular weight (most abundant/longest-lived isotopes) = 423.053 amu Computer time = 0.80 seconds Orbital eigenvalues (eV) -44.17469 -41.10299 -38.50874 -38.02278 -37.03453 -35.32425 -34.39266 -32.59856 -31.91671 -30.47890 -30.13216 -29.59495 -28.45947 -28.45183 -26.91838 -26.02376 -24.06793 -24.02106 -22.44730 -21.85360 -19.32060 -18.80901 -18.77029 -18.05509 -17.90014 -17.41459 -16.86890 -16.83123 -16.30273 -16.19262 -15.63951 -15.48610 -15.36460 -15.07230 -14.69806 -14.60236 -14.48796 -14.26512 -14.04582 -14.03903 -13.62402 -13.41075 -13.37286 -13.33941 -13.32313 -13.15683 -13.13729 -12.90088 -12.80073 -12.27461 -12.12466 -12.11558 -11.55927 -11.49000 -11.44988 -11.36949 -11.26825 -11.19030 -10.84994 -10.66753 -10.62519 -10.32906 -9.95364 -8.99375 -0.80518 -0.33564 0.25462 0.79814 1.18178 1.28264 1.31706 1.39439 1.41775 1.43471 1.62832 1.78526 1.87890 1.96289 2.31162 2.36668 2.38600 2.39616 2.75832 2.91831 3.17553 3.40144 3.45493 3.54825 3.80945 3.95570 3.98166 4.02876 4.07468 4.17315 4.30655 4.37248 4.48180 4.52559 4.66885 4.67134 4.71176 4.71817 4.72000 4.74153 4.76255 4.81203 5.02645 5.14818 5.29961 5.40766 5.50179 5.51024 5.64729 6.19420 6.24887 6.55489 6.75887 6.94600 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.453 4.453 2 Si 1.141 2.859 3 C -0.453 4.453 4 C -0.452 4.452 5 C -0.407 4.407 6 C -0.181 4.181 7 C -0.031 4.031 8 C 0.125 3.875 9 N -0.724 5.724 10 C 0.579 3.421 11 O -0.527 6.527 12 C -0.179 4.179 13 C 0.179 3.821 14 N -0.352 5.352 15 C -0.038 4.038 16 C -0.053 4.053 17 O -0.553 6.553 18 Si 0.966 3.034 19 H -0.246 1.246 20 H -0.244 1.244 21 H -0.242 1.242 22 C 0.039 3.961 23 N -0.459 5.459 24 C 0.243 3.757 25 C -0.064 4.064 26 Br 0.008 6.992 27 C -0.040 4.040 28 H 0.072 0.928 29 H 0.076 0.924 30 H 0.071 0.929 31 H 0.071 0.929 32 H 0.076 0.924 33 H 0.072 0.928 34 H 0.071 0.929 35 H 0.076 0.924 36 H 0.071 0.929 37 H 0.093 0.907 38 H 0.093 0.907 39 H 0.078 0.922 40 H 0.078 0.922 41 H 0.402 0.598 42 H 0.194 0.806 43 H 0.087 0.913 44 H 0.392 0.608 45 H 0.192 0.808 46 H 0.154 0.846 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.891 1.411 -2.039 3.119 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.561 4.561 2 Si 1.327 2.673 3 C -0.561 4.561 4 C -0.560 4.560 5 C -0.442 4.442 6 C -0.181 4.181 7 C -0.068 4.068 8 C 0.002 3.998 9 N -0.376 5.376 10 C 0.365 3.635 11 O -0.404 6.404 12 C -0.187 4.187 13 C 0.053 3.947 14 N -0.024 5.024 15 C -0.149 4.149 16 C -0.162 4.162 17 O -0.361 6.361 18 Si 0.784 3.216 19 H -0.170 1.170 20 H -0.167 1.167 21 H -0.165 1.165 22 C -0.111 4.111 23 N -0.178 5.178 24 C -0.003 4.003 25 C -0.147 4.147 26 Br 0.093 6.907 27 C -0.067 4.067 28 H 0.091 0.909 29 H 0.095 0.905 30 H 0.090 0.910 31 H 0.090 0.910 32 H 0.095 0.905 33 H 0.091 0.909 34 H 0.090 0.910 35 H 0.095 0.905 36 H 0.090 0.910 37 H 0.112 0.888 38 H 0.112 0.888 39 H 0.096 0.904 40 H 0.096 0.904 41 H 0.238 0.762 42 H 0.211 0.789 43 H 0.105 0.895 44 H 0.241 0.759 45 H 0.209 0.791 46 H 0.172 0.828 Dipole moment (debyes) X Y Z Total from point charges -0.771 0.662 -1.186 1.561 hybrid contribution -0.848 0.606 -0.096 1.046 sum -1.619 1.267 -1.281 2.423 Atomic orbital electron populations 1.26125 1.20146 1.04888 1.04905 0.76985 0.65948 0.64694 0.59661 1.26123 1.06646 1.18394 1.04905 1.26119 1.06641 1.08399 1.14850 1.35949 1.01452 1.01827 1.05020 1.23365 0.99448 0.98991 0.96343 1.18904 1.01388 0.98702 0.87804 1.21328 1.00162 0.96648 0.81670 1.45763 1.53712 1.32814 1.05351 1.17446 0.80122 0.83530 0.82450 1.90859 1.37201 1.25781 1.86509 1.19211 1.06285 0.99947 0.93237 1.22128 0.93615 0.95862 0.83111 1.42561 1.33126 1.20792 1.05959 1.20894 1.10208 1.03189 0.80655 1.24444 1.02238 0.85293 1.04255 1.86387 1.77161 1.24425 1.48077 0.85489 0.81532 0.81660 0.72894 1.16966 1.16658 1.16505 1.22439 0.96350 0.91967 1.00357 1.70860 1.23614 1.27027 0.96250 1.20401 0.96856 0.88501 0.94511 1.20413 1.04481 0.99192 0.90589 1.96848 1.64012 1.31856 1.97986 1.21070 0.94206 0.92981 0.98399 0.90924 0.90475 0.90969 0.90966 0.90481 0.90919 0.90964 0.90472 0.90965 0.88835 0.88839 0.90406 0.90403 0.76179 0.78899 0.89548 0.75887 0.79126 0.82846 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.45 0.90 8.65 101.05 0.87 1.77 16 2 Si 1.14 -3.09 14.26 -169.99 -2.42 -5.52 16 3 C -0.45 0.89 8.65 101.05 0.87 1.76 16 4 C -0.45 0.98 8.65 101.05 0.87 1.85 16 5 C -0.41 -0.35 12.14 29.55 0.36 0.01 16 6 C -0.18 -0.24 13.34 -37.12 -0.50 -0.74 16 7 C -0.03 0.05 5.82 -29.52 -0.17 -0.12 16 8 C 0.13 -0.06 5.63 -4.04 -0.02 -0.09 16 9 N -0.72 0.90 5.51 -61.34 -0.34 0.56 16 10 C 0.58 0.87 7.76 -12.45 -0.10 0.78 16 11 O -0.53 -2.61 16.27 5.28 0.09 -2.52 16 12 C -0.18 -0.16 5.84 -105.37 -0.61 -0.77 16 13 C 0.18 0.34 9.91 -16.36 -0.16 0.17 16 14 N -0.35 -0.98 2.93 -58.09 -0.17 -1.15 16 15 C -0.04 -0.06 6.27 -81.43 -0.51 -0.57 16 16 C -0.05 0.08 3.05 36.00 0.11 0.19 16 17 O -0.55 0.78 10.89 -35.23 -0.38 0.39 16 18 Si 0.97 -2.09 26.60 -169.99 -4.52 -6.61 16 19 H -0.25 0.57 7.11 56.52 0.40 0.97 16 20 H -0.24 -0.04 7.11 56.52 0.40 0.37 16 21 H -0.24 0.54 6.84 56.52 0.39 0.93 16 22 C 0.04 0.08 10.44 -17.94 -0.19 -0.11 16 23 N -0.46 -2.11 11.30 -12.70 -0.14 -2.25 16 24 C 0.24 0.92 7.59 -155.92 -1.18 -0.26 16 25 C -0.06 -0.13 6.24 -39.34 -0.25 -0.37 16 26 Br 0.01 0.01 33.72 -68.01 -2.29 -2.28 16 27 C -0.04 0.01 9.26 -39.14 -0.36 -0.35 16 28 H 0.07 -0.11 7.96 -51.93 -0.41 -0.53 16 29 H 0.08 -0.20 7.96 -51.93 -0.41 -0.62 16 30 H 0.07 -0.12 7.96 -51.93 -0.41 -0.54 16 31 H 0.07 -0.12 7.96 -51.93 -0.41 -0.53 16 32 H 0.08 -0.20 7.96 -51.93 -0.41 -0.61 16 33 H 0.07 -0.11 7.96 -51.93 -0.41 -0.52 16 34 H 0.07 -0.13 7.96 -51.93 -0.41 -0.55 16 35 H 0.08 -0.21 7.96 -51.93 -0.41 -0.63 16 36 H 0.07 -0.13 7.96 -51.93 -0.41 -0.55 16 37 H 0.09 -0.27 8.14 -51.93 -0.42 -0.69 16 38 H 0.09 -0.28 8.14 -51.93 -0.42 -0.70 16 39 H 0.08 0.04 8.14 -51.93 -0.42 -0.38 16 40 H 0.08 0.05 8.14 -51.93 -0.42 -0.38 16 41 H 0.40 -1.67 6.51 -40.82 -0.27 -1.94 16 42 H 0.19 0.30 6.21 -52.49 -0.33 -0.02 16 43 H 0.09 -0.31 7.96 -51.93 -0.41 -0.72 16 44 H 0.39 -2.29 8.74 45.56 0.40 -1.89 16 45 H 0.19 -0.17 6.72 -52.49 -0.35 -0.53 16 46 H 0.15 -0.57 6.44 -52.48 -0.34 -0.91 16 LS Contribution 418.61 15.07 6.31 6.31 Total: 0.00 -10.52 418.61 -10.36 -20.88 By element: Atomic # 1 Polarization: -5.44 SS G_CDS: -5.52 Total: -10.96 kcal Atomic # 6 Polarization: 4.12 SS G_CDS: -0.96 Total: 3.16 kcal Atomic # 7 Polarization: -2.19 SS G_CDS: -0.65 Total: -2.85 kcal Atomic # 8 Polarization: -1.83 SS G_CDS: -0.30 Total: -2.13 kcal Atomic # 14 Polarization: -5.18 SS G_CDS: -6.95 Total: -12.13 kcal Atomic # 35 Polarization: 0.01 SS G_CDS: -2.29 Total: -2.28 kcal Total LS contribution 6.31 Total: 6.31 kcal Total: -10.52 -10.36 -20.88 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_11968232_12335884.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 46.104 kcal (2) G-P(sol) polarization free energy of solvation -10.521 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 35.584 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.363 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.883 kcal (6) G-S(sol) free energy of system = (1) + (5) 25.221 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.80 seconds