Wall clock time and date at job start Tue Mar 9 2021 13:01:09 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86303 * 109.46880 * 2 1 4 4 C 1.50699 * 109.47243 * 120.00087 * 2 1 3 5 5 C 1.34998 * 126.42915 * 209.99557 * 4 2 1 6 6 N 1.33589 * 108.65942 * 179.97438 * 5 4 2 7 7 C 1.32414 * 109.21786 * 0.02562 * 6 5 4 8 8 C 1.41250 * 132.11286 * 180.02562 * 7 6 5 9 9 Br 1.89093 * 120.25722 * 359.97438 * 8 7 6 10 10 C 1.35704 * 119.48824 * 179.97438 * 8 7 6 11 11 C 1.41765 * 119.53304 * 0.02562 * 10 8 7 12 12 C 1.47581 * 120.00877 * 179.97438 * 11 10 8 13 13 O 1.21583 * 119.99777 * 179.97438 * 12 11 10 14 14 N 1.34773 * 119.99722 * 0.02562 * 12 11 10 15 15 C 1.46501 * 119.99579 * 179.97438 * 14 12 11 16 16 C 1.52999 * 109.47161 * 179.97438 * 15 14 12 17 17 H 1.09000 * 112.85232 * 316.20113 * 16 15 14 18 18 C 1.53789 * 113.61194 * 87.50653 * 16 15 14 19 19 C 1.53779 * 87.07851 * 139.98045 * 18 16 15 20 20 H 1.09009 * 113.69124 * 89.13179 * 19 18 16 21 21 C 1.50702 * 113.61326 * 220.01582 * 19 18 16 22 22 C 1.38230 * 119.99945 * 37.23170 * 21 19 18 23 23 C 1.38234 * 120.00220 * 179.74780 * 22 21 19 24 24 C 1.38237 * 119.99576 * 0.54130 * 23 22 21 25 25 C 1.38233 * 120.00242 * 359.70623 * 24 23 22 26 26 C 1.38234 * 119.99989 * 217.50003 * 21 19 18 27 27 C 1.53778 * 87.08401 * 334.56770 * 19 18 16 28 28 C 1.36495 * 119.97932 * 0.02562 * 11 10 8 29 29 N 1.35943 * 120.50749 * 359.97438 * 28 11 10 30 30 H 0.96703 * 114.00184 * 59.99733 * 1 2 3 31 31 H 1.09003 * 109.46780 * 240.00124 * 2 1 3 32 32 H 1.48499 * 109.99776 * 60.00534 * 3 2 1 33 33 H 1.48500 * 109.99672 * 181.31769 * 3 2 1 34 34 H 1.08000 * 125.67141 * 0.02562 * 5 4 2 35 35 H 1.08003 * 120.23315 * 180.27341 * 10 8 7 36 36 H 0.97001 * 120.00359 * 359.97438 * 14 12 11 37 37 H 1.08999 * 109.47498 * 300.00066 * 15 14 12 38 38 H 1.09007 * 109.46884 * 60.00164 * 15 14 12 39 39 H 1.09001 * 113.61183 * 254.52896 * 18 16 15 40 40 H 1.09000 * 113.61306 * 25.43130 * 18 16 15 41 41 H 1.08006 * 120.00163 * 359.97438 * 22 21 19 42 42 H 1.07997 * 120.00418 * 180.27207 * 23 22 21 43 43 H 1.08002 * 120.00074 * 179.72983 * 24 23 22 44 44 H 1.08000 * 120.00102 * 179.97438 * 25 24 23 45 45 H 1.08000 * 120.00452 * 0.02562 * 26 21 19 46 46 H 1.08996 * 113.61382 * 270.88065 * 27 19 18 47 47 H 1.09003 * 113.61299 * 139.98076 * 27 19 18 48 48 H 1.08006 * 119.74425 * 179.97438 * 28 11 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9314 -0.7104 1.2304 5 6 3.0855 -0.4613 1.8849 6 7 3.1764 -1.2960 2.9240 7 6 2.1068 -2.0761 2.9512 8 6 1.7120 -3.1120 3.8266 9 35 2.8119 -3.5969 5.2863 10 6 0.5373 -3.7565 3.6119 11 6 -0.2752 -3.3808 2.5126 12 6 -1.5545 -4.0751 2.2690 13 8 -2.2513 -3.7525 1.3263 14 7 -1.9507 -5.0661 3.0920 15 6 -3.2210 -5.7548 2.8505 16 6 -3.4306 -6.8282 3.9205 17 1 -2.5293 -7.4072 4.1215 18 6 -4.1253 -6.3058 5.1892 19 6 -4.9133 -7.6262 5.2064 20 1 -4.4188 -8.4243 5.7603 21 6 -6.3618 -7.4598 5.5877 22 6 -7.0662 -6.3503 5.1594 23 6 -8.3962 -6.2002 5.5048 24 6 -9.0187 -7.1542 6.2880 25 6 -8.3129 -8.2612 6.7206 26 6 -6.9844 -8.4140 6.3705 27 6 -4.6800 -7.6941 3.6879 28 6 0.1267 -2.3776 1.6789 29 7 1.3034 -1.7316 1.8935 30 1 -0.3934 0.4417 -0.7650 31 1 1.7923 -0.5138 -0.8900 32 1 1.5615 2.4678 1.2086 33 1 3.5345 1.7703 -0.0321 34 1 3.8138 0.2888 1.6141 35 1 0.2216 -4.5474 4.2763 36 1 -1.3950 -5.3232 3.8443 37 1 -4.0384 -5.0350 2.8924 38 1 -3.1991 -6.2229 1.8663 39 1 -3.4522 -6.1880 6.0384 40 1 -4.7478 -5.4280 5.0162 41 1 -6.5784 -5.6024 4.5517 42 1 -8.9478 -5.3355 5.1665 43 1 -10.0567 -7.0348 6.5616 44 1 -8.7992 -9.0062 7.3329 45 1 -6.4328 -9.2785 6.7092 46 1 -5.4542 -7.1959 3.1045 47 1 -4.4547 -8.6971 3.3252 48 1 -0.4951 -2.0947 0.8422 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_22_12130084_12335884.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:01:09 Heat of formation + Delta-G solvation = 84.584204 kcal Electronic energy + Delta-G solvation = -33073.500900 eV Core-core repulsion = 28529.412029 eV Total energy + Delta-G solvation = -4544.088871 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 442.068 amu Computer time = 1.15 seconds Orbital eigenvalues (eV) -44.21782 -41.47272 -40.80929 -39.08218 -38.41567 -37.97348 -35.90595 -35.19717 -32.82499 -32.16972 -31.89143 -31.76389 -30.24004 -28.96878 -26.90537 -26.80323 -25.68434 -24.38443 -24.06651 -23.56483 -22.45416 -22.00111 -21.73193 -20.27735 -19.14579 -18.82278 -18.73069 -17.97143 -17.75321 -17.39093 -17.12412 -16.74205 -16.42038 -16.16618 -16.10286 -15.96802 -15.58414 -15.51236 -15.36683 -15.03711 -14.77273 -14.57923 -14.48434 -14.25862 -14.22569 -13.99741 -13.53742 -13.37950 -13.30530 -13.17047 -12.93963 -12.83512 -12.75527 -12.42414 -12.11410 -12.10888 -11.63019 -11.57510 -11.50197 -11.41951 -11.32464 -11.29299 -11.08717 -10.83692 -10.27319 -9.98645 -9.81946 -9.56586 -9.03413 -5.17665 -0.83131 -0.35980 0.23141 0.42947 0.50069 0.88182 1.19301 1.38866 1.51990 1.80575 1.90100 1.97043 2.29831 2.73526 2.82940 2.90281 3.15381 3.36760 3.38837 3.42403 3.44132 3.53432 3.54964 3.85431 3.89426 3.94998 4.00252 4.05990 4.11410 4.12096 4.16264 4.24002 4.27876 4.35210 4.44487 4.50013 4.53659 4.59847 4.63903 4.68949 4.72067 4.81704 4.89680 4.98685 5.01112 5.09860 5.14905 5.21996 5.23847 5.34881 5.57800 5.61028 5.64003 5.72823 6.10097 6.24370 6.29572 6.50168 6.97265 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.554 6.554 2 C -0.043 4.043 3 Si 0.720 3.280 4 C -0.037 4.037 5 C 0.038 3.962 6 N -0.460 5.460 7 C 0.244 3.756 8 C -0.066 4.066 9 Br 0.008 6.992 10 C -0.038 4.038 11 C -0.178 4.178 12 C 0.577 3.423 13 O -0.529 6.529 14 N -0.720 5.720 15 C 0.130 3.870 16 C -0.127 4.127 17 H 0.100 0.900 18 C -0.129 4.129 19 C -0.073 4.073 20 H 0.099 0.901 21 C -0.072 4.072 22 C -0.117 4.117 23 C -0.118 4.118 24 C -0.124 4.124 25 C -0.118 4.118 26 C -0.117 4.117 27 C -0.118 4.118 28 C 0.178 3.822 29 N -0.352 5.352 30 H 0.394 0.606 31 H 0.085 0.915 32 H -0.250 1.250 33 H -0.249 1.249 34 H 0.188 0.812 35 H 0.155 0.845 36 H 0.402 0.598 37 H 0.074 0.926 38 H 0.074 0.926 39 H 0.072 0.928 40 H 0.089 0.911 41 H 0.121 0.879 42 H 0.122 0.878 43 H 0.121 0.879 44 H 0.122 0.878 45 H 0.121 0.879 46 H 0.088 0.912 47 H 0.075 0.925 48 H 0.195 0.805 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.255 -0.608 -2.674 3.550 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.362 6.362 2 C -0.153 4.153 3 Si 0.618 3.382 4 C -0.148 4.148 5 C -0.113 4.113 6 N -0.178 5.178 7 C -0.002 4.002 8 C -0.148 4.148 9 Br 0.094 6.906 10 C -0.065 4.065 11 C -0.186 4.186 12 C 0.362 3.638 13 O -0.406 6.406 14 N -0.372 5.372 15 C 0.007 3.993 16 C -0.146 4.146 17 H 0.118 0.882 18 C -0.167 4.167 19 C -0.092 4.092 20 H 0.117 0.883 21 C -0.072 4.072 22 C -0.135 4.135 23 C -0.136 4.136 24 C -0.142 4.142 25 C -0.136 4.136 26 C -0.135 4.135 27 C -0.156 4.156 28 C 0.051 3.949 29 N -0.024 5.024 30 H 0.243 0.757 31 H 0.103 0.897 32 H -0.174 1.174 33 H -0.173 1.173 34 H 0.205 0.795 35 H 0.172 0.828 36 H 0.237 0.763 37 H 0.092 0.908 38 H 0.093 0.907 39 H 0.091 0.909 40 H 0.107 0.893 41 H 0.139 0.861 42 H 0.140 0.860 43 H 0.139 0.861 44 H 0.140 0.860 45 H 0.139 0.861 46 H 0.107 0.893 47 H 0.094 0.906 48 H 0.211 0.789 Dipole moment (debyes) X Y Z Total from point charges -1.099 -0.244 -1.320 1.735 hybrid contribution -0.589 -0.645 -0.237 0.905 sum -1.688 -0.889 -1.557 2.463 Atomic orbital electron populations 1.86371 1.16997 1.82120 1.50664 1.24433 0.85864 1.10684 0.94329 0.95120 0.80894 0.74629 0.87602 1.21013 0.97026 0.95534 1.01228 1.22349 0.96238 1.00224 0.92448 1.70860 1.19395 1.07007 1.20568 1.20426 0.89746 0.99429 0.90577 1.20421 0.97802 0.98852 0.97724 1.96848 1.66378 1.90596 1.36827 1.21090 0.91292 0.98126 0.95954 1.19277 0.98622 1.01581 0.99105 1.17453 0.84198 0.79678 0.82441 1.90850 1.54988 1.64968 1.29773 1.45812 1.23639 1.36563 1.31194 1.21473 0.84947 0.93880 0.98994 1.22827 0.98982 0.97077 0.95693 0.88169 1.23222 0.98729 0.97198 0.97513 1.21484 0.91824 0.98939 0.96907 0.88261 1.19693 0.95158 0.94762 0.97585 1.21012 0.94415 0.97649 1.00449 1.21182 0.94936 0.99198 0.98262 1.21200 1.00079 0.94640 0.98315 1.21190 0.94574 0.97956 0.99897 1.21080 0.95035 0.98949 0.98431 1.23002 0.96713 1.00356 0.95520 1.22148 0.84773 0.89208 0.98727 1.42588 1.15040 1.23815 1.21002 0.75655 0.89712 1.17398 1.17325 0.79500 0.82788 0.76290 0.90769 0.90728 0.90894 0.89277 0.86088 0.86037 0.86097 0.86042 0.86139 0.89299 0.90624 0.78853 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 0.80 10.88 -35.23 -0.38 0.42 16 2 C -0.04 0.06 3.05 36.01 0.11 0.16 16 3 Si 0.72 -1.82 31.28 -169.99 -5.32 -7.13 16 4 C -0.04 -0.09 6.28 -81.43 -0.51 -0.60 16 5 C 0.04 0.12 10.44 -17.94 -0.19 -0.06 16 6 N -0.46 -2.52 11.30 -12.70 -0.14 -2.67 16 7 C 0.24 1.08 7.59 -155.92 -1.18 -0.10 16 8 C -0.07 -0.16 6.24 -39.34 -0.25 -0.40 16 9 Br 0.01 0.02 33.72 -68.01 -2.29 -2.28 16 10 C -0.04 0.00 9.26 -39.14 -0.36 -0.36 16 11 C -0.18 -0.19 5.84 -105.37 -0.61 -0.80 16 12 C 0.58 0.77 7.76 -12.45 -0.10 0.68 16 13 O -0.53 -2.46 16.27 5.29 0.09 -2.38 16 14 N -0.72 1.13 5.51 -61.33 -0.34 0.79 16 15 C 0.13 -0.23 5.51 -4.04 -0.02 -0.25 16 16 C -0.13 0.42 3.76 -89.80 -0.34 0.08 16 17 H 0.10 -0.42 8.14 -51.93 -0.42 -0.84 16 18 C -0.13 0.34 7.01 -25.92 -0.18 0.16 16 19 C -0.07 0.14 3.98 -90.96 -0.36 -0.22 16 20 H 0.10 -0.24 8.09 -51.92 -0.42 -0.66 16 21 C -0.07 0.00 5.29 -104.63 -0.55 -0.56 16 22 C -0.12 -0.03 8.62 -39.59 -0.34 -0.37 16 23 C -0.12 -0.07 10.05 -39.58 -0.40 -0.46 16 24 C -0.12 -0.08 10.05 -39.58 -0.40 -0.48 16 25 C -0.12 -0.07 10.05 -39.58 -0.40 -0.46 16 26 C -0.12 -0.05 9.71 -39.58 -0.38 -0.43 16 27 C -0.12 0.29 7.11 -25.92 -0.18 0.11 16 28 C 0.18 0.39 9.91 -16.36 -0.16 0.23 16 29 N -0.35 -1.20 2.93 -58.10 -0.17 -1.37 16 30 H 0.39 -2.57 8.74 45.56 0.40 -2.17 16 31 H 0.09 -0.27 7.96 -51.93 -0.41 -0.68 16 32 H -0.25 -0.39 7.11 56.52 0.40 0.02 16 33 H -0.25 0.19 6.91 56.52 0.39 0.58 16 34 H 0.19 0.17 6.77 -52.49 -0.36 -0.19 16 35 H 0.15 -0.52 6.44 -52.48 -0.34 -0.86 16 36 H 0.40 -1.59 6.51 -40.82 -0.27 -1.86 16 37 H 0.07 -0.07 7.84 -51.93 -0.41 -0.47 16 38 H 0.07 -0.07 8.14 -51.93 -0.42 -0.49 16 39 H 0.07 -0.21 8.14 -51.93 -0.42 -0.63 16 40 H 0.09 -0.18 6.05 -51.93 -0.31 -0.50 16 41 H 0.12 -0.13 6.64 -52.48 -0.35 -0.48 16 42 H 0.12 -0.11 8.06 -52.49 -0.42 -0.53 16 43 H 0.12 -0.11 8.06 -52.49 -0.42 -0.53 16 44 H 0.12 -0.12 8.06 -52.49 -0.42 -0.54 16 45 H 0.12 -0.13 8.05 -52.49 -0.42 -0.56 16 46 H 0.09 -0.17 7.69 -51.93 -0.40 -0.57 16 47 H 0.08 -0.20 8.14 -51.93 -0.42 -0.62 16 48 H 0.19 0.36 6.20 -52.48 -0.33 0.03 16 LS Contribution 417.13 15.07 6.29 6.29 Total: 0.00 -10.16 417.13 -14.87 -25.02 By element: Atomic # 1 Polarization: -6.77 SS G_CDS: -5.78 Total: -12.55 kcal Atomic # 6 Polarization: 2.66 SS G_CDS: -6.81 Total: -4.15 kcal Atomic # 7 Polarization: -2.59 SS G_CDS: -0.65 Total: -3.24 kcal Atomic # 8 Polarization: -1.66 SS G_CDS: -0.30 Total: -1.95 kcal Atomic # 14 Polarization: -1.82 SS G_CDS: -5.32 Total: -7.13 kcal Atomic # 35 Polarization: 0.02 SS G_CDS: -2.29 Total: -2.28 kcal Total LS contribution 6.29 Total: 6.29 kcal Total: -10.16 -14.87 -25.02 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_12130084_12335884.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 109.606 kcal (2) G-P(sol) polarization free energy of solvation -10.156 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 99.450 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -14.866 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.022 kcal (6) G-S(sol) free energy of system = (1) + (5) 84.584 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.15 seconds