Wall clock time and date at job start Tue Mar 9 2021 13:02:53 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42902 * 1 3 3 Si 1.86307 * 109.47067 * 2 1 4 4 C 1.50698 * 109.46936 * 240.00355 * 2 1 3 5 5 C 1.34502 * 125.49286 * 150.30948 * 4 2 1 6 6 C 1.46754 * 106.36157 * 180.12435 * 5 4 2 7 7 C 1.47266 * 126.96715 * 179.85746 * 6 5 4 8 8 O 1.21625 * 120.00041 * 179.68535 * 7 6 5 9 9 N 1.34778 * 119.99746 * 359.68964 * 7 6 5 10 10 C 1.46501 * 119.99632 * 180.02562 * 9 7 6 11 11 C 1.53005 * 109.47151 * 180.02562 * 10 9 7 12 12 H 1.09008 * 112.84635 * 316.19694 * 11 10 9 13 13 C 1.53780 * 113.61589 * 87.49835 * 11 10 9 14 14 C 1.53776 * 87.08140 * 139.98593 * 13 11 10 15 15 H 1.08999 * 113.69502 * 89.13028 * 14 13 11 16 16 C 1.50706 * 113.61107 * 220.02213 * 14 13 11 17 17 C 1.38233 * 120.00109 * 37.21915 * 16 14 13 18 18 C 1.38238 * 119.99754 * 179.76611 * 17 16 14 19 19 C 1.38234 * 120.00038 * 0.48818 * 18 17 16 20 20 C 1.38238 * 120.00047 * 359.78460 * 19 18 17 21 21 C 1.38235 * 120.00108 * 359.96171 * 20 19 18 22 22 C 1.53775 * 113.61799 * 184.99926 * 11 10 9 23 23 C 1.36328 * 106.06501 * 359.59951 * 6 5 4 24 24 C 1.50994 * 126.79403 * 180.25172 * 23 6 5 25 25 C 1.53396 * 108.25295 * 164.32182 * 24 23 6 26 26 C 1.53166 * 109.04393 * 48.46725 * 25 24 23 27 27 C 1.53129 * 109.52140 * 290.42439 * 26 25 24 28 28 N 1.35218 * 108.65849 * 0.25505 * 23 6 5 29 29 H 0.96702 * 113.99438 * 299.99925 * 1 2 3 30 30 H 1.08999 * 109.47366 * 120.00182 * 2 1 3 31 31 H 1.48501 * 110.00007 * 178.68001 * 3 2 1 32 32 H 1.48490 * 109.99920 * 300.00271 * 3 2 1 33 33 H 1.07994 * 126.81864 * 0.02562 * 5 4 2 34 34 H 0.97001 * 120.00138 * 359.97438 * 9 7 6 35 35 H 1.08991 * 109.47795 * 60.00025 * 10 9 7 36 36 H 1.09004 * 109.46894 * 299.99195 * 10 9 7 37 37 H 1.08996 * 113.61438 * 25.43415 * 13 11 10 38 38 H 1.09006 * 113.61530 * 254.53417 * 13 11 10 39 39 H 1.08004 * 119.99934 * 0.02562 * 17 16 14 40 40 H 1.07999 * 119.99931 * 180.25459 * 18 17 16 41 41 H 1.08001 * 120.00294 * 179.76932 * 19 18 17 42 42 H 1.08000 * 120.00559 * 179.97438 * 20 19 18 43 43 H 1.07999 * 120.00165 * 179.97438 * 21 20 19 44 44 H 1.08999 * 113.61967 * 105.46595 * 22 11 10 45 45 H 1.09005 * 113.61453 * 334.56159 * 22 11 10 46 46 H 1.09000 * 109.70903 * 284.01647 * 24 23 6 47 47 H 1.08997 * 109.70721 * 44.63834 * 24 23 6 48 48 H 1.09002 * 109.54850 * 288.59379 * 25 24 23 49 49 H 1.09001 * 109.61423 * 168.37310 * 25 24 23 50 50 H 1.08994 * 109.46081 * 170.40877 * 26 25 24 51 51 H 1.08997 * 109.46153 * 50.43647 * 26 25 24 52 52 H 1.09005 * 109.56852 * 291.17352 * 27 26 25 53 53 H 1.09007 * 109.65835 * 170.88719 * 27 26 25 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7103 -1.2305 5 6 3.0885 -0.4501 -1.8647 6 6 3.1553 -1.3776 -3.0001 7 6 4.2335 -1.4797 -3.9979 8 8 4.1610 -2.3039 -4.8894 9 7 5.3007 -0.6600 -3.9231 10 6 6.3731 -0.7612 -4.9161 11 6 7.4561 0.2737 -4.6046 12 1 7.0464 1.2503 -4.3463 13 6 8.5233 -0.2291 -3.6182 14 6 9.5600 0.4960 -4.4922 15 1 9.7278 1.5335 -4.2032 16 6 10.8419 -0.2755 -4.6738 17 6 10.8079 -1.6511 -4.8056 18 6 11.9833 -2.3582 -4.9770 19 6 13.1934 -1.6908 -5.0065 20 6 13.2279 -0.3157 -4.8690 21 6 12.0521 0.3920 -4.7029 22 6 8.5728 0.3338 -5.6601 23 6 2.0195 -2.1293 -2.9405 24 6 1.6160 -3.2347 -3.8866 25 6 0.4944 -4.0466 -3.2263 26 6 -0.5704 -3.0845 -2.6910 27 6 -0.0059 -2.3094 -1.4971 28 7 1.2885 -1.7249 -1.8773 29 1 -0.3932 0.4417 0.7651 30 1 1.7924 -0.5138 0.8899 31 1 3.5346 1.7704 0.0321 32 1 1.5615 2.4679 -1.2084 33 1 3.8220 0.2946 -1.5933 34 1 5.3584 -0.0024 -3.2123 35 1 5.9669 -0.5745 -5.9101 36 1 6.8062 -1.7610 -4.8824 37 1 8.6375 -1.3131 -3.6137 38 1 8.4255 0.1913 -2.6172 39 1 9.8627 -2.1730 -4.7789 40 1 11.9564 -3.4326 -5.0841 41 1 14.1121 -2.2436 -5.1366 42 1 14.1733 0.2059 -4.8916 43 1 12.0790 1.4663 -4.5951 44 1 8.5150 1.2086 -6.3077 45 1 8.7006 -0.5964 -6.2139 46 1 1.2572 -2.8052 -4.8220 47 1 2.4713 -3.8813 -4.0825 48 1 0.9039 -4.6319 -2.4031 49 1 0.0454 -4.7151 -3.9610 50 1 -1.4460 -3.6514 -2.3748 51 1 -0.8553 -2.3846 -3.4765 52 1 0.1330 -2.9870 -0.6546 53 1 -0.6969 -1.5145 -1.2161 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_12130084_16915396.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:02:53 Heat of formation + Delta-G solvation = 22.960764 kcal Electronic energy + Delta-G solvation = -32567.376338 eV Core-core repulsion = 28371.236231 eV Total energy + Delta-G solvation = -4196.140107 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 367.193 amu Computer time = 1.37 seconds Orbital eigenvalues (eV) -42.86739 -41.26013 -40.24098 -38.91787 -37.86979 -36.93564 -35.58451 -33.63031 -32.29051 -31.78823 -31.32162 -30.02376 -28.46742 -26.68273 -26.54960 -24.94699 -24.62585 -23.63069 -23.48695 -21.95071 -21.69747 -21.22863 -20.15242 -19.57281 -18.55523 -18.13997 -17.85694 -17.12501 -16.87861 -16.63891 -16.50284 -16.19866 -15.99993 -15.89833 -15.54363 -15.49910 -15.15864 -15.08419 -14.87224 -14.69791 -14.54811 -14.33859 -14.17665 -14.14019 -13.92613 -13.84812 -13.42677 -13.32539 -13.07874 -12.89629 -12.70529 -12.58089 -12.36499 -12.15815 -12.05617 -12.01904 -11.88525 -11.72708 -11.52872 -11.41449 -11.28402 -10.93847 -10.56094 -10.20401 -9.84450 -9.69286 -9.56784 -9.14032 -4.94932 0.41527 0.47489 0.59766 0.95222 1.37073 1.70285 1.77538 2.08286 2.31463 2.40764 2.82169 3.15180 3.48332 3.51039 3.55012 3.55581 3.63926 3.70509 3.75786 3.79381 3.94583 4.00732 4.03011 4.10046 4.15963 4.23315 4.24546 4.27595 4.29013 4.34966 4.43709 4.45602 4.51747 4.58665 4.61150 4.65688 4.70732 4.74570 4.78432 4.80977 4.84446 4.88808 4.91737 4.93583 5.03149 5.08237 5.09868 5.12523 5.16192 5.19120 5.38067 5.47565 5.56408 5.57078 5.61827 5.75327 5.93804 6.10663 6.12750 6.52772 6.84304 7.22236 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.563 6.563 2 C -0.052 4.052 3 Si 0.806 3.194 4 C 0.026 3.974 5 C -0.192 4.192 6 C -0.258 4.258 7 C 0.586 3.414 8 O -0.587 6.587 9 N -0.716 5.716 10 C 0.135 3.865 11 C -0.113 4.113 12 H 0.111 0.889 13 C -0.126 4.126 14 C -0.070 4.070 15 H 0.110 0.890 16 C -0.079 4.079 17 C -0.129 4.129 18 C -0.132 4.132 19 C -0.138 4.138 20 C -0.129 4.129 21 C -0.129 4.129 22 C -0.117 4.117 23 C 0.102 3.898 24 C -0.053 4.053 25 C -0.123 4.123 26 C -0.134 4.134 27 C 0.098 3.902 28 N -0.423 5.423 29 H 0.409 0.591 30 H 0.101 0.899 31 H -0.279 1.279 32 H -0.311 1.311 33 H 0.157 0.843 34 H 0.409 0.591 35 H 0.057 0.943 36 H 0.058 0.942 37 H 0.080 0.920 38 H 0.078 0.922 39 H 0.125 0.875 40 H 0.131 0.869 41 H 0.133 0.867 42 H 0.136 0.864 43 H 0.135 0.865 44 H 0.080 0.920 45 H 0.080 0.920 46 H 0.079 0.921 47 H 0.082 0.918 48 H 0.069 0.931 49 H 0.092 0.908 50 H 0.113 0.887 51 H 0.065 0.935 52 H 0.091 0.909 53 H 0.118 0.882 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.956 3.310 7.542 8.751 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.375 6.375 2 C -0.161 4.161 3 Si 0.710 3.290 4 C -0.083 4.083 5 C -0.216 4.216 6 C -0.268 4.268 7 C 0.376 3.624 8 O -0.469 6.469 9 N -0.367 5.367 10 C 0.011 3.989 11 C -0.132 4.132 12 H 0.129 0.871 13 C -0.163 4.163 14 C -0.088 4.088 15 H 0.128 0.872 16 C -0.079 4.079 17 C -0.147 4.147 18 C -0.149 4.149 19 C -0.156 4.156 20 C -0.147 4.147 21 C -0.147 4.147 22 C -0.155 4.155 23 C -0.016 4.016 24 C -0.091 4.091 25 C -0.161 4.161 26 C -0.172 4.172 27 C -0.021 4.021 28 N -0.098 5.098 29 H 0.262 0.738 30 H 0.118 0.882 31 H -0.206 1.206 32 H -0.239 1.239 33 H 0.174 0.826 34 H 0.245 0.755 35 H 0.076 0.924 36 H 0.076 0.924 37 H 0.099 0.901 38 H 0.096 0.904 39 H 0.143 0.857 40 H 0.149 0.851 41 H 0.151 0.849 42 H 0.154 0.846 43 H 0.152 0.848 44 H 0.099 0.901 45 H 0.098 0.902 46 H 0.098 0.902 47 H 0.100 0.900 48 H 0.088 0.912 49 H 0.111 0.889 50 H 0.131 0.869 51 H 0.084 0.916 52 H 0.109 0.891 53 H 0.136 0.864 Dipole moment (debyes) X Y Z Total from point charges -2.774 2.888 6.112 7.307 hybrid contribution 0.452 -0.385 -0.287 0.659 sum -2.322 2.503 5.825 6.751 Atomic orbital electron populations 1.86314 1.16770 1.82410 1.51957 1.24608 0.86133 1.10764 0.94584 0.94547 0.77759 0.72345 0.84318 1.20307 0.94723 0.94178 0.99114 1.21805 0.99232 1.03360 0.97187 1.19972 0.98574 1.06098 1.02138 1.17544 0.81485 0.79997 0.83335 1.90728 1.80173 1.38534 1.37469 1.45696 1.20488 1.38350 1.32167 1.21343 0.86862 0.99216 0.91458 1.22733 0.93054 0.99110 0.98267 0.87111 1.23167 0.94266 1.00573 0.98286 1.21510 0.90094 0.99570 0.97616 0.87221 1.19926 0.95053 0.93772 0.99144 1.21193 0.98617 0.94159 1.00759 1.21417 0.92827 1.00745 0.99959 1.21441 0.98546 0.95062 1.00509 1.21455 0.99016 0.94619 0.99603 1.21342 0.92109 1.00714 1.00508 1.22984 0.93603 1.03009 0.95906 1.20664 0.91620 0.98255 0.91096 1.20458 0.99742 0.93310 0.95578 1.21712 0.95202 0.97841 1.01332 1.21939 0.99562 0.98634 0.97036 1.22494 0.81641 0.99342 0.98617 1.44127 1.17987 1.26678 1.21027 0.73790 0.88182 1.20609 1.23889 0.82589 0.75520 0.92444 0.92362 0.90131 0.90350 0.85713 0.85100 0.84861 0.84633 0.84753 0.90109 0.90155 0.90227 0.89959 0.91196 0.88909 0.86870 0.91601 0.89108 0.86433 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 3.01 9.97 -148.98 -1.48 1.53 16 2 C -0.05 0.17 2.99 71.24 0.21 0.38 16 3 Si 0.81 -3.62 31.24 68.60 2.14 -1.48 16 4 C 0.03 0.14 6.18 40.99 0.25 0.39 16 5 C -0.19 -1.34 9.09 23.64 0.21 -1.13 16 6 C -0.26 -2.93 6.28 -19.12 -0.12 -3.05 16 7 C 0.59 7.64 7.81 86.62 0.68 8.32 16 8 O -0.59 -11.34 15.34 -4.11 -0.06 -11.41 16 9 N -0.72 -4.36 5.55 -466.52 -2.59 -6.95 16 10 C 0.13 0.56 5.51 86.38 0.48 1.04 16 11 C -0.11 0.16 3.75 -10.27 -0.04 0.12 16 12 H 0.11 -0.40 8.14 -2.38 -0.02 -0.42 16 13 C -0.13 0.14 7.00 31.12 0.22 0.36 16 14 C -0.07 0.06 3.98 -11.01 -0.04 0.02 16 15 H 0.11 -0.33 8.09 -2.39 -0.02 -0.34 16 16 C -0.08 -0.22 5.29 -19.86 -0.11 -0.33 16 17 C -0.13 -0.50 8.62 22.27 0.19 -0.30 16 18 C -0.13 -0.50 10.05 22.27 0.22 -0.28 16 19 C -0.14 -0.45 10.05 22.27 0.22 -0.22 16 20 C -0.13 -0.35 10.05 22.27 0.22 -0.13 16 21 C -0.13 -0.34 9.71 22.27 0.22 -0.12 16 22 C -0.12 0.10 7.11 31.12 0.22 0.33 16 23 C 0.10 1.01 6.57 41.68 0.27 1.29 16 24 C -0.05 -0.39 5.32 30.07 0.16 -0.23 16 25 C -0.12 -0.06 5.98 30.78 0.18 0.12 16 26 C -0.13 0.24 5.92 30.69 0.18 0.43 16 27 C 0.10 -0.01 6.22 86.32 0.54 0.53 16 28 N -0.42 -2.56 3.11 -493.60 -1.54 -4.10 16 29 H 0.41 -6.49 8.74 -74.06 -0.65 -7.14 16 30 H 0.10 -0.72 7.96 -2.39 -0.02 -0.74 16 31 H -0.28 0.12 6.88 99.48 0.68 0.81 16 32 H -0.31 -1.67 7.11 99.48 0.71 -0.96 16 33 H 0.16 0.46 6.38 -2.91 -0.02 0.44 16 34 H 0.41 0.61 7.60 -92.71 -0.70 -0.09 16 35 H 0.06 0.38 8.14 -2.39 -0.02 0.37 16 36 H 0.06 0.38 7.84 -2.39 -0.02 0.36 16 37 H 0.08 0.06 6.05 -2.39 -0.01 0.05 16 38 H 0.08 -0.18 8.14 -2.38 -0.02 -0.20 16 39 H 0.13 0.28 6.64 -2.91 -0.02 0.26 16 40 H 0.13 0.11 8.06 -2.91 -0.02 0.08 16 41 H 0.13 -0.03 8.06 -2.91 -0.02 -0.06 16 42 H 0.14 -0.14 8.06 -2.91 -0.02 -0.16 16 43 H 0.13 -0.14 8.05 -2.91 -0.02 -0.16 16 44 H 0.08 -0.16 8.14 -2.39 -0.02 -0.18 16 45 H 0.08 0.07 7.69 -2.38 -0.02 0.06 16 46 H 0.08 0.66 8.14 -2.39 -0.02 0.65 16 47 H 0.08 0.87 7.40 -2.39 -0.02 0.85 16 48 H 0.07 0.03 8.12 -2.39 -0.02 0.01 16 49 H 0.09 -0.19 8.14 -2.39 -0.02 -0.21 16 50 H 0.11 -0.74 8.14 -2.39 -0.02 -0.76 16 51 H 0.07 0.02 8.11 -2.39 -0.02 0.00 16 52 H 0.09 -0.20 8.14 -2.38 -0.02 -0.22 16 53 H 0.12 -0.10 5.93 -2.38 -0.01 -0.12 16 Total: 0.00 -23.16 416.59 0.44 -22.72 By element: Atomic # 1 Polarization: -7.42 SS G_CDS: -0.41 Total: -7.83 kcal Atomic # 6 Polarization: 3.14 SS G_CDS: 4.38 Total: 7.52 kcal Atomic # 7 Polarization: -6.92 SS G_CDS: -4.13 Total: -11.04 kcal Atomic # 8 Polarization: -8.33 SS G_CDS: -1.55 Total: -9.88 kcal Atomic # 14 Polarization: -3.62 SS G_CDS: 2.14 Total: -1.48 kcal Total: -23.16 0.44 -22.72 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_12130084_16915396.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 45.678 kcal (2) G-P(sol) polarization free energy of solvation -23.160 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 22.518 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.442 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.717 kcal (6) G-S(sol) free energy of system = (1) + (5) 22.961 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.37 seconds