Wall clock time and date at job start Tue Mar 9 2021 13:08:13 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46500 * 1 3 3 C 1.46494 * 119.99907 * 2 1 4 4 C 1.53002 * 109.47297 * 270.00148 * 3 2 1 5 5 H 1.08993 * 112.84853 * 316.19676 * 4 3 2 6 6 C 1.53777 * 113.61401 * 87.50292 * 4 3 2 7 7 C 1.53779 * 87.07980 * 139.98131 * 6 4 3 8 8 H 1.09000 * 113.68995 * 89.12713 * 7 6 4 9 9 O 1.42905 * 113.61458 * 220.01489 * 7 6 4 10 10 C 1.53775 * 87.08364 * 334.56644 * 7 6 4 11 11 C 1.34776 * 120.00030 * 180.02562 * 2 1 3 12 12 O 1.21589 * 119.99899 * 184.66921 * 11 2 1 13 13 C 1.47582 * 120.00012 * 4.66358 * 11 2 1 14 14 C 1.36492 * 120.00941 * 280.20235 * 13 11 2 15 15 N 1.35946 * 120.50795 * 179.97438 * 14 13 11 16 16 C 1.36999 * 132.41656 * 180.02562 * 15 14 13 17 17 C 1.50694 * 126.42924 * 359.97438 * 16 15 14 18 18 O 1.42904 * 109.47309 * 329.99561 * 17 16 15 19 19 Si 1.86303 * 109.47212 * 209.99864 * 17 16 15 20 20 C 1.35007 * 107.14154 * 180.24051 * 16 15 14 21 21 N 1.33581 * 108.65529 * 359.57490 * 20 16 15 22 22 C 1.32414 * 109.22638 * 0.43604 * 21 20 16 23 23 C 1.41247 * 132.12241 * 179.75628 * 22 21 20 24 24 Br 1.89098 * 120.25358 * 359.97438 * 23 22 21 25 25 C 1.35704 * 119.49148 * 179.97438 * 23 22 21 26 26 H 1.09002 * 109.47322 * 273.91404 * 1 2 3 27 27 H 1.08995 * 109.47615 * 33.91484 * 1 2 3 28 28 H 1.09001 * 109.46889 * 153.91588 * 1 2 3 29 29 H 1.09001 * 109.47112 * 30.00587 * 3 2 1 30 30 H 1.09005 * 109.47316 * 149.99856 * 3 2 1 31 31 H 1.09002 * 113.61489 * 254.53272 * 6 4 3 32 32 H 1.09004 * 113.61311 * 25.43252 * 6 4 3 33 33 H 0.96695 * 113.99996 * 277.50165 * 9 7 6 34 34 H 1.09003 * 113.61803 * 270.88441 * 10 7 6 35 35 H 1.08997 * 113.69110 * 139.99033 * 10 7 6 36 36 H 1.08005 * 119.74712 * 0.02562 * 14 13 11 37 37 H 1.08996 * 109.47591 * 89.99652 * 17 16 15 38 38 H 0.96696 * 113.99999 * 300.00552 * 18 17 16 39 39 H 1.48495 * 110.00213 * 180.02562 * 19 17 16 40 40 H 1.48502 * 109.99887 * 301.31682 * 19 17 16 41 41 H 1.08000 * 125.67043 * 179.73734 * 20 16 15 42 42 H 1.08002 * 120.23205 * 180.02562 * 25 23 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.1975 1.2687 0.0000 4 6 2.4524 1.7104 -1.4425 5 1 2.7834 0.8931 -2.0832 6 6 1.3071 2.5420 -2.0437 7 6 2.3902 3.4193 -2.6934 8 1 2.7040 3.0708 -3.6773 9 8 2.0860 4.8154 -2.6701 10 6 3.3232 2.9730 -1.5554 11 6 2.1389 -1.1672 -0.0005 12 8 3.3517 -1.1689 0.0852 13 6 1.4046 -2.4431 -0.1050 14 6 0.8021 -2.9763 0.9976 15 7 0.1227 -4.1508 0.9127 16 6 -0.5599 -4.8926 1.8405 17 6 -0.7365 -4.5583 3.2992 18 8 0.3940 -3.8140 3.7577 19 14 -0.8836 -6.1331 4.2838 20 6 -1.0396 -5.9822 1.2039 21 7 -0.6781 -5.9203 -0.0806 22 6 0.0310 -4.8202 -0.2815 23 6 0.6466 -4.2875 -1.4358 24 35 0.5269 -5.2011 -3.0871 25 6 1.3247 -3.1151 -1.3506 26 1 -0.3634 0.0701 1.0253 27 1 -0.3634 0.8528 -0.5734 28 1 -0.3633 -0.9230 -0.4519 29 1 1.6084 2.0283 0.5139 30 1 3.1499 1.1384 0.5139 31 1 0.7000 1.9929 -2.7635 32 1 0.7099 3.0663 -1.2976 33 1 1.4996 5.1021 -3.3834 34 1 3.2772 3.6151 -0.6758 35 1 4.3441 2.7717 -1.8796 36 1 0.8649 -2.4607 1.9446 37 1 -1.6403 -3.9630 3.4288 38 1 1.2350 -4.2835 3.6722 39 1 -1.0588 -5.8172 5.7241 40 1 -2.0367 -6.9314 3.7955 41 1 -1.6213 -6.7712 1.6571 42 1 1.7996 -2.6968 -2.2257 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_12312124_12335884.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:08:13 Heat of formation + Delta-G solvation = 23.012228 kcal Electronic energy + Delta-G solvation = -28952.492854 eV Core-core repulsion = 24755.494010 eV Total energy + Delta-G solvation = -4196.998843 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 396.052 amu Computer time = 0.87 seconds Orbital eigenvalues (eV) -44.25907 -41.50866 -40.16185 -38.52902 -38.00399 -36.96819 -35.66750 -35.30433 -32.72636 -31.82019 -30.52623 -29.48549 -27.61890 -26.90970 -26.65442 -25.43746 -24.11334 -23.46342 -22.47134 -20.86305 -20.52590 -19.36791 -18.79167 -18.50288 -18.03058 -17.68011 -17.64361 -17.30783 -16.69599 -16.13423 -16.06726 -15.94619 -15.85633 -15.49934 -15.19634 -15.00152 -14.67161 -14.37595 -14.09061 -14.03994 -13.56438 -13.44805 -13.41702 -13.35919 -13.21413 -12.94531 -12.77377 -12.68366 -12.38563 -12.14968 -11.78373 -11.55105 -11.43638 -11.32812 -11.26680 -11.19590 -10.88459 -10.76488 -10.02931 -9.83200 -9.08227 -4.93509 -0.83273 -0.28317 0.17577 0.91887 1.14210 1.39936 1.57424 1.66869 1.80964 1.98348 2.03510 2.81306 2.95149 3.11110 3.29837 3.34584 3.46408 3.47796 3.53596 3.60477 3.82095 3.83519 3.97254 4.10309 4.13592 4.26602 4.27477 4.31019 4.36246 4.40027 4.50641 4.56505 4.63489 4.77550 4.79390 4.81035 4.84384 4.95675 5.00467 5.10990 5.28235 5.30388 5.46970 5.58939 6.07058 6.42342 6.52337 6.80779 6.88465 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.069 3.931 2 N -0.594 5.594 3 C 0.125 3.875 4 C -0.118 4.118 5 H 0.085 0.915 6 C -0.152 4.152 7 C 0.071 3.929 8 H 0.088 0.912 9 O -0.581 6.581 10 C -0.127 4.127 11 C 0.577 3.423 12 O -0.555 6.555 13 C -0.150 4.150 14 C 0.135 3.865 15 N -0.349 5.349 16 C -0.077 4.077 17 C -0.035 4.035 18 O -0.553 6.553 19 Si 0.793 3.207 20 C 0.033 3.967 21 N -0.496 5.496 22 C 0.225 3.775 23 C -0.073 4.073 24 Br 0.000 7.000 25 C -0.024 4.024 26 H 0.074 0.926 27 H 0.093 0.907 28 H 0.071 0.929 29 H 0.104 0.896 30 H 0.076 0.924 31 H 0.077 0.923 32 H 0.094 0.906 33 H 0.394 0.606 34 H 0.089 0.911 35 H 0.071 0.929 36 H 0.198 0.802 37 H 0.126 0.874 38 H 0.396 0.604 39 H -0.286 1.286 40 H -0.269 1.269 41 H 0.206 0.794 42 H 0.167 0.833 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.676 2.323 1.644 3.906 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.073 4.073 2 N -0.325 5.325 3 C 0.003 3.997 4 C -0.137 4.137 5 H 0.104 0.896 6 C -0.190 4.190 7 C 0.012 3.988 8 H 0.106 0.894 9 O -0.389 6.389 10 C -0.165 4.165 11 C 0.363 3.637 12 O -0.433 6.433 13 C -0.157 4.157 14 C 0.010 3.990 15 N -0.022 5.022 16 C -0.189 4.189 17 C -0.145 4.145 18 O -0.360 6.360 19 Si 0.695 3.305 20 C -0.117 4.117 21 N -0.215 5.215 22 C -0.020 4.020 23 C -0.156 4.156 24 Br 0.086 6.914 25 C -0.050 4.050 26 H 0.093 0.907 27 H 0.112 0.888 28 H 0.089 0.911 29 H 0.122 0.878 30 H 0.095 0.905 31 H 0.096 0.904 32 H 0.113 0.887 33 H 0.244 0.756 34 H 0.108 0.892 35 H 0.090 0.910 36 H 0.215 0.785 37 H 0.144 0.856 38 H 0.246 0.754 39 H -0.213 1.213 40 H -0.195 1.195 41 H 0.222 0.778 42 H 0.184 0.816 Dipole moment (debyes) X Y Z Total from point charges -2.915 1.336 1.726 3.641 hybrid contribution -0.350 1.122 -0.158 1.186 sum -3.265 2.458 1.568 4.377 Atomic orbital electron populations 1.22092 0.77224 1.04415 1.03558 1.47854 1.08282 1.05102 1.71261 1.21613 0.97867 0.83943 0.96235 1.22605 0.97837 0.96393 0.96907 0.89638 1.23701 0.96715 0.97617 1.00934 1.23408 0.96476 0.80644 0.98292 0.89412 1.86490 1.71524 1.24492 1.56431 1.23090 0.98394 0.95945 0.99114 1.17778 0.86239 0.83336 0.76374 1.90870 1.14750 1.87298 1.50350 1.19181 1.04351 0.98456 0.93748 1.22096 0.90770 0.85029 1.01084 1.42635 1.34177 1.15828 1.09594 1.22306 1.06759 0.95707 0.94113 1.25035 0.92460 1.09076 0.87928 1.86440 1.18114 1.45953 1.85477 0.93060 0.87239 0.75237 0.74984 1.22827 1.01469 0.98217 0.89199 1.70811 1.15454 1.16839 1.18372 1.20513 1.02597 0.92339 0.86580 1.20471 1.05428 0.98110 0.91551 1.96829 1.97639 1.76960 1.19988 1.21055 0.94475 0.91501 0.97952 0.90721 0.88813 0.91053 0.87780 0.90526 0.90439 0.88715 0.75623 0.89218 0.90983 0.78482 0.85634 0.75408 1.21301 1.19455 0.77787 0.81553 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.07 -0.58 10.19 127.77 1.30 0.72 16 2 N -0.59 2.06 2.87 -850.49 -2.44 -0.39 16 3 C 0.13 -0.43 5.30 86.38 0.46 0.03 16 4 C -0.12 0.39 3.96 -10.27 -0.04 0.35 16 5 H 0.09 -0.07 8.14 -2.39 -0.02 -0.09 16 6 C -0.15 0.83 7.00 31.12 0.22 1.05 16 7 C 0.07 -0.18 5.21 31.12 0.16 -0.01 16 8 H 0.09 -0.36 8.14 -2.39 -0.02 -0.38 16 9 O -0.58 0.00 13.67 -148.98 -2.04 -2.04 16 10 C -0.13 0.18 7.47 31.12 0.23 0.41 16 11 C 0.58 0.93 7.05 86.71 0.61 1.54 16 12 O -0.55 -5.41 16.66 -4.00 -0.07 -5.48 16 13 C -0.15 0.05 3.74 -20.35 -0.08 -0.03 16 14 C 0.14 -0.25 9.73 83.65 0.81 0.57 16 15 N -0.35 -0.35 2.93 -337.71 -0.99 -1.34 16 16 C -0.08 0.09 6.25 41.01 0.26 0.35 16 17 C -0.04 0.20 3.06 71.23 0.22 0.42 16 18 O -0.55 3.23 10.90 -148.98 -1.62 1.61 16 19 Si 0.79 -5.34 31.33 68.60 2.15 -3.19 16 20 C 0.03 0.05 10.44 83.68 0.87 0.93 16 21 N -0.50 -3.79 11.30 -194.10 -2.19 -5.98 16 22 C 0.22 1.26 7.59 134.18 1.02 2.28 16 23 C -0.07 -0.29 6.24 22.42 0.14 -0.15 16 24 Br 0.00 0.00 33.72 -20.37 -0.69 -0.68 16 25 C -0.02 -0.01 9.54 22.55 0.22 0.20 16 26 H 0.07 -0.75 8.14 -2.39 -0.02 -0.77 16 27 H 0.09 -1.01 7.63 -2.39 -0.02 -1.03 16 28 H 0.07 -0.53 6.59 -2.39 -0.02 -0.55 16 29 H 0.10 -0.73 7.77 -2.39 -0.02 -0.75 16 30 H 0.08 0.03 7.36 -2.38 -0.02 0.02 16 31 H 0.08 -0.52 8.14 -2.39 -0.02 -0.54 16 32 H 0.09 -0.56 7.90 -2.38 -0.02 -0.58 16 33 H 0.39 -3.13 9.12 -74.06 -0.68 -3.80 16 34 H 0.09 -0.06 8.10 -2.39 -0.02 -0.08 16 35 H 0.07 -0.04 8.14 -2.39 -0.02 -0.06 16 36 H 0.20 -1.01 6.70 -2.91 -0.02 -1.03 16 37 H 0.13 -0.77 7.96 -2.39 -0.02 -0.79 16 38 H 0.40 -4.57 8.70 -74.06 -0.64 -5.21 16 39 H -0.29 -0.01 7.11 99.48 0.71 0.70 16 40 H -0.27 0.84 6.80 99.48 0.68 1.52 16 41 H 0.21 -0.64 6.69 -2.91 -0.02 -0.66 16 42 H 0.17 -0.35 8.06 -2.91 -0.02 -0.37 16 Total: 0.00 -21.58 373.36 -1.71 -23.29 By element: Atomic # 1 Polarization: -14.23 SS G_CDS: -0.22 Total: -14.45 kcal Atomic # 6 Polarization: 2.25 SS G_CDS: 6.40 Total: 8.65 kcal Atomic # 7 Polarization: -2.08 SS G_CDS: -5.63 Total: -7.71 kcal Atomic # 8 Polarization: -2.18 SS G_CDS: -3.73 Total: -5.91 kcal Atomic # 14 Polarization: -5.34 SS G_CDS: 2.15 Total: -3.19 kcal Atomic # 35 Polarization: 0.00 SS G_CDS: -0.69 Total: -0.68 kcal Total: -21.58 -1.71 -23.29 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_12312124_12335884.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 46.304 kcal (2) G-P(sol) polarization free energy of solvation -21.578 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 24.727 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.715 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.292 kcal (6) G-S(sol) free energy of system = (1) + (5) 23.012 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.87 seconds