Wall clock time and date at job start Tue Mar 9 2021 13:08:47 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42893 * 1 3 3 Si 1.86298 * 109.47384 * 2 1 4 4 C 1.50700 * 109.47220 * 120.00168 * 2 1 3 5 5 C 1.35001 * 126.43040 * 209.97353 * 4 2 1 6 6 N 1.33587 * 108.65825 * 180.02562 * 5 4 2 7 7 C 1.32413 * 109.21856 * 0.02562 * 6 5 4 8 8 C 1.41255 * 132.11326 * 180.02562 * 7 6 5 9 9 Br 1.89103 * 120.25194 * 359.97043 * 8 7 6 10 10 C 1.35702 * 119.49024 * 179.67821 * 8 7 6 11 11 C 1.41759 * 119.52935 * 0.53773 * 10 8 7 12 12 C 1.47577 * 120.00893 * 179.74679 * 11 10 8 13 13 O 1.21593 * 120.00079 * 179.72509 * 12 11 10 14 14 N 1.34777 * 119.99657 * 359.72204 * 12 11 10 15 15 C 1.46499 * 119.99665 * 179.72390 * 14 12 11 16 16 H 1.08999 * 109.47228 * 325.27715 * 15 14 12 17 17 C 1.52999 * 109.47341 * 85.27876 * 15 14 12 18 18 C 1.52997 * 109.47188 * 180.02562 * 17 15 14 19 19 C 1.53003 * 109.46860 * 299.99296 * 18 17 15 20 20 H 1.08999 * 109.47459 * 300.00495 * 19 18 17 21 21 O 1.42902 * 109.46943 * 180.02562 * 19 18 17 22 22 C 1.35697 * 117.00069 * 90.00506 * 21 19 18 23 23 N 1.32221 * 119.68854 * 0.02562 * 22 21 19 24 24 C 1.31981 * 121.65746 * 180.02562 * 23 22 21 25 25 C 1.38034 * 120.86233 * 359.97438 * 24 23 22 26 26 C 1.38830 * 119.29677 * 0.02562 * 25 24 23 27 27 C 1.38464 * 118.47494 * 359.72887 * 26 25 24 28 28 Cl 1.73609 * 120.45557 * 180.26270 * 27 26 25 29 29 C 1.53003 * 109.46811 * 60.01012 * 19 18 17 30 30 C 1.53001 * 109.47193 * 205.27836 * 15 14 12 31 31 C 1.36496 * 119.98488 * 359.47298 * 11 10 8 32 32 N 1.35953 * 120.50048 * 0.25257 * 31 11 10 33 33 H 0.96705 * 114.00021 * 59.99806 * 1 2 3 34 34 H 1.09001 * 109.46984 * 240.00208 * 2 1 3 35 35 H 1.48500 * 109.99869 * 298.67897 * 3 2 1 36 36 H 1.48500 * 110.00066 * 59.99902 * 3 2 1 37 37 H 1.08006 * 125.67009 * 359.97438 * 5 4 2 38 38 H 1.08003 * 120.23547 * 180.26293 * 10 8 7 39 39 H 0.97001 * 120.00485 * 0.02562 * 14 12 11 40 40 H 1.09001 * 109.46823 * 300.00095 * 17 15 14 41 41 H 1.08999 * 109.47091 * 59.99755 * 17 15 14 42 42 H 1.09002 * 109.46693 * 180.02562 * 18 17 15 43 43 H 1.08993 * 109.47585 * 60.00233 * 18 17 15 44 44 H 1.08007 * 119.57075 * 180.02562 * 24 23 22 45 45 H 1.07995 * 120.35216 * 180.02562 * 25 24 23 46 46 H 1.08001 * 120.76364 * 179.97438 * 26 25 24 47 47 H 1.09000 * 109.47291 * 180.02562 * 29 19 18 48 48 H 1.08999 * 109.47531 * 59.99527 * 29 19 18 49 49 H 1.08999 * 109.46935 * 300.00059 * 30 15 14 50 50 H 1.09004 * 109.47138 * 59.99988 * 30 15 14 51 51 H 1.07997 * 119.75207 * 180.23387 * 31 11 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7104 1.2304 5 6 3.0856 -0.4616 1.8847 6 7 3.1770 -1.2970 2.9232 7 6 2.1074 -2.0772 2.9503 8 6 1.7130 -3.1137 3.8251 9 35 2.8136 -3.5995 5.2841 10 6 0.5354 -3.7542 3.6139 11 6 -0.2751 -3.3811 2.5124 12 6 -1.5551 -4.0743 2.2696 13 8 -2.2527 -3.7508 1.3276 14 7 -1.9509 -5.0661 3.0920 15 6 -3.2244 -5.7501 2.8545 16 1 -3.9509 -5.0392 2.4611 17 6 -3.0162 -6.8789 1.8428 18 6 -4.3463 -7.5929 1.5944 19 6 -4.8653 -8.1766 2.9100 20 1 -4.1391 -8.8878 3.3035 21 8 -6.1074 -8.8440 2.6778 22 6 -6.0484 -10.1609 2.3557 23 7 -4.8739 -10.7624 2.2713 24 6 -4.7713 -12.0410 1.9605 25 6 -5.8959 -12.8016 1.7112 26 6 -7.1485 -12.2080 1.7893 27 6 -7.2236 -10.8662 2.1226 28 17 -8.7637 -10.0738 2.2416 29 6 -5.0737 -7.0479 3.9217 30 6 -3.7429 -6.3339 4.1703 31 6 0.1259 -2.3767 1.6796 32 7 1.3029 -1.7310 1.8941 33 1 -0.3933 0.4417 -0.7651 34 1 1.7922 -0.5138 -0.8900 35 1 1.5879 2.4585 -1.2243 36 1 1.5615 2.4679 1.2085 37 1 3.8146 0.2877 1.6132 38 1 0.2201 -4.5456 4.2778 39 1 -1.3946 -5.3240 3.8436 40 1 -2.6468 -6.4630 0.9054 41 1 -2.2896 -7.5899 2.2362 42 1 -4.1978 -8.3973 0.8740 43 1 -5.0725 -6.8818 1.2008 44 1 -3.7947 -12.4985 1.9014 45 1 -5.8024 -13.8473 1.4580 46 1 -8.0441 -12.7807 1.5985 47 1 -5.4430 -7.4637 4.8591 48 1 -5.7999 -6.3367 3.5281 49 1 -3.0164 -7.0448 4.5636 50 1 -3.8913 -5.5297 4.8910 51 1 -0.4964 -2.0930 0.8438 There are 78 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 78 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_12496662_12335884.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:08:47 Heat of formation + Delta-G solvation = 30.970294 kcal Electronic energy + Delta-G solvation = -40382.929043 eV Core-core repulsion = 34937.069784 eV Total energy + Delta-G solvation = -5445.859259 eV No. of doubly occupied orbitals = 78 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 507.039 amu Computer time = 1.73 seconds Orbital eigenvalues (eV) -44.24765 -41.90998 -41.37201 -39.92935 -38.62304 -38.15345 -37.86523 -37.60879 -35.54514 -34.96080 -33.41421 -32.71137 -31.97543 -31.93489 -31.44811 -30.29328 -29.61279 -26.90048 -25.89093 -24.91581 -24.45403 -24.08622 -23.85158 -23.00737 -22.43201 -21.73812 -21.14052 -19.63232 -19.20059 -18.81858 -18.73599 -18.19662 -17.93458 -17.46028 -17.37096 -17.26888 -16.89590 -16.47036 -16.29018 -16.08891 -15.97190 -15.84482 -15.58013 -15.38513 -15.16319 -14.91616 -14.78843 -14.60482 -14.43043 -14.24514 -14.13305 -13.97959 -13.41379 -13.39423 -13.37235 -13.33749 -13.15458 -13.04735 -12.97152 -12.87672 -12.76143 -12.27296 -12.21402 -12.17158 -12.08125 -11.59702 -11.55583 -11.49287 -11.37276 -11.33223 -11.23557 -10.91602 -10.78651 -10.72884 -10.29876 -10.00037 -9.47581 -9.05298 -4.95850 -0.90452 -0.38175 -0.11121 0.12146 0.18795 0.94429 1.03950 1.17183 1.38508 1.62635 1.77781 1.78676 1.95634 2.00033 2.21500 2.58934 2.77582 2.94638 3.14757 3.22352 3.37341 3.40637 3.50446 3.55623 3.57359 3.70036 3.88585 3.91787 3.93828 3.99634 4.04830 4.13308 4.15208 4.24361 4.28042 4.30101 4.30915 4.37790 4.39122 4.45516 4.49476 4.57247 4.74283 4.80352 4.88485 4.97460 4.98305 5.01474 5.03231 5.05611 5.15076 5.19646 5.30773 5.34140 5.39613 5.56407 6.12323 6.28964 6.40284 6.47387 6.66264 6.95089 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.565 6.565 2 C -0.056 4.056 3 Si 0.809 3.191 4 C -0.053 4.053 5 C 0.041 3.959 6 N -0.490 5.490 7 C 0.221 3.779 8 C -0.080 4.080 9 Br 0.009 6.991 10 C -0.025 4.025 11 C -0.173 4.173 12 C 0.580 3.420 13 O -0.566 6.566 14 N -0.700 5.700 15 C 0.146 3.854 16 H 0.075 0.925 17 C -0.116 4.116 18 C -0.124 4.124 19 C 0.090 3.910 20 H 0.094 0.906 21 O -0.305 6.305 22 C 0.317 3.683 23 N -0.540 5.540 24 C 0.137 3.863 25 C -0.191 4.191 26 C -0.035 4.035 27 C -0.134 4.134 28 Cl -0.056 7.056 29 C -0.110 4.110 30 C -0.113 4.113 31 C 0.164 3.836 32 N -0.360 5.360 33 H 0.406 0.594 34 H 0.109 0.891 35 H -0.271 1.271 36 H -0.308 1.308 37 H 0.231 0.769 38 H 0.188 0.812 39 H 0.417 0.583 40 H 0.056 0.944 41 H 0.084 0.916 42 H 0.060 0.940 43 H 0.061 0.939 44 H 0.196 0.804 45 H 0.179 0.821 46 H 0.170 0.830 47 H 0.084 0.916 48 H 0.070 0.930 49 H 0.095 0.905 50 H 0.094 0.906 51 H 0.186 0.814 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.658 -4.676 -1.024 5.475 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.377 6.377 2 C -0.163 4.163 3 Si 0.710 3.290 4 C -0.163 4.163 5 C -0.108 4.108 6 N -0.209 5.209 7 C -0.024 4.024 8 C -0.163 4.163 9 Br 0.094 6.906 10 C -0.051 4.051 11 C -0.181 4.181 12 C 0.367 3.633 13 O -0.446 6.446 14 N -0.352 5.352 15 C 0.042 3.958 16 H 0.094 0.906 17 C -0.154 4.154 18 C -0.162 4.162 19 C 0.035 3.965 20 H 0.112 0.888 21 O -0.212 6.212 22 C 0.137 3.863 23 N -0.264 5.264 24 C -0.018 4.018 25 C -0.211 4.211 26 C -0.061 4.061 27 C -0.163 4.163 28 Cl -0.027 7.027 29 C -0.149 4.149 30 C -0.151 4.151 31 C 0.037 3.963 32 N -0.033 5.033 33 H 0.258 0.742 34 H 0.127 0.873 35 H -0.197 1.197 36 H -0.236 1.236 37 H 0.247 0.753 38 H 0.205 0.795 39 H 0.256 0.744 40 H 0.075 0.925 41 H 0.102 0.898 42 H 0.079 0.921 43 H 0.079 0.921 44 H 0.212 0.788 45 H 0.196 0.804 46 H 0.187 0.813 47 H 0.103 0.897 48 H 0.089 0.911 49 H 0.114 0.886 50 H 0.113 0.887 51 H 0.203 0.797 Dipole moment (debyes) X Y Z Total from point charges 3.525 -3.315 0.118 4.841 hybrid contribution -2.736 -0.351 -1.417 3.101 sum 0.789 -3.667 -1.299 3.969 Atomic orbital electron populations 1.86441 1.18179 1.81084 1.51988 1.24796 0.84331 1.12245 0.94931 0.93610 0.89422 0.69138 0.76803 1.21459 0.97521 0.95778 1.01568 1.22982 0.96591 1.00221 0.90992 1.70842 1.20004 1.08067 1.21980 1.20747 0.90141 1.00139 0.91401 1.20577 0.98470 0.99262 0.97958 1.96830 1.66613 1.90454 1.36710 1.21364 0.90107 0.98139 0.95446 1.19268 0.98439 1.01149 0.99255 1.17547 0.83985 0.79643 0.82163 1.90839 1.55882 1.66454 1.31383 1.45729 1.23189 1.35186 1.31094 1.21078 0.84570 0.93550 0.96619 0.90633 1.21758 0.96972 0.97268 0.99442 1.21799 0.97347 0.99907 0.97172 1.22563 0.83970 0.93946 0.96060 0.88782 1.86353 1.34829 1.17657 1.82353 1.19692 0.88855 0.85563 0.92155 1.67491 1.24404 1.14453 1.20099 1.23201 1.01324 0.87010 0.90269 1.22419 0.91187 1.03707 1.03758 1.21814 1.01046 0.90788 0.92449 1.21174 0.86364 0.95142 1.13653 1.98384 1.27026 1.80492 1.96847 1.21552 0.98404 0.96113 0.98789 1.21734 0.96535 1.01141 0.95651 1.22159 0.85044 0.89956 0.99105 1.42725 1.14972 1.24309 1.21283 0.74157 0.87306 1.19686 1.23557 0.75322 0.79469 0.74428 0.92511 0.89753 0.92122 0.92067 0.78772 0.80351 0.81254 0.89692 0.91084 0.88638 0.88715 0.79715 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.57 0.05 10.88 -148.98 -1.62 -1.57 16 2 C -0.06 0.14 3.05 71.24 0.22 0.36 16 3 Si 0.81 -3.94 31.18 68.60 2.14 -1.81 16 4 C -0.05 -0.18 6.28 41.01 0.26 0.08 16 5 C 0.04 0.11 10.44 83.68 0.87 0.99 16 6 N -0.49 -4.33 11.30 -194.10 -2.19 -6.53 16 7 C 0.22 1.77 7.59 134.19 1.02 2.79 16 8 C -0.08 -0.31 6.24 22.42 0.14 -0.17 16 9 Br 0.01 0.02 33.72 -20.37 -0.69 -0.66 16 10 C -0.02 0.03 9.26 22.55 0.21 0.24 16 11 C -0.17 -0.36 5.84 -20.35 -0.12 -0.48 16 12 C 0.58 1.70 7.73 86.71 0.67 2.37 16 13 O -0.57 -6.08 15.93 -4.01 -0.06 -6.15 16 14 N -0.70 2.64 5.03 -445.66 -2.24 0.40 16 15 C 0.15 -0.36 2.45 44.99 0.11 -0.24 16 16 H 0.08 0.18 7.57 -2.39 -0.02 0.16 16 17 C -0.12 0.09 5.50 30.59 0.17 0.26 16 18 C -0.12 -0.21 5.54 30.59 0.17 -0.04 16 19 C 0.09 0.08 2.38 30.60 0.07 0.15 16 20 H 0.09 0.06 6.98 -2.39 -0.02 0.04 16 21 O -0.30 -1.80 9.24 -90.17 -0.83 -2.63 16 22 C 0.32 1.70 7.45 84.82 0.63 2.33 16 23 N -0.54 -1.47 8.65 -308.86 -2.67 -4.14 16 24 C 0.14 -0.42 11.17 84.62 0.95 0.53 16 25 C -0.19 0.99 10.10 22.36 0.23 1.21 16 26 C -0.04 0.06 9.97 22.47 0.22 0.28 16 27 C -0.13 -0.53 6.36 22.51 0.14 -0.38 16 28 Cl -0.06 -0.30 28.54 -2.72 -0.08 -0.38 16 29 C -0.11 0.30 5.58 30.61 0.17 0.47 16 30 C -0.11 0.77 5.39 30.61 0.17 0.94 16 31 C 0.16 0.86 9.91 83.65 0.83 1.69 16 32 N -0.36 -2.35 2.93 -337.71 -0.99 -3.34 16 33 H 0.41 -3.38 8.74 -74.05 -0.65 -4.03 16 34 H 0.11 -0.78 7.96 -2.39 -0.02 -0.80 16 35 H -0.27 0.51 7.11 99.48 0.71 1.22 16 36 H -0.31 -1.49 7.11 99.48 0.71 -0.79 16 37 H 0.23 -1.49 6.90 -2.91 -0.02 -1.51 16 38 H 0.19 -1.75 6.44 -2.91 -0.02 -1.76 16 39 H 0.42 -4.26 6.64 -92.71 -0.62 -4.88 16 40 H 0.06 0.20 8.14 -2.39 -0.02 0.18 16 41 H 0.08 -0.28 8.14 -2.39 -0.02 -0.30 16 42 H 0.06 0.25 8.14 -2.39 -0.02 0.23 16 43 H 0.06 0.25 8.14 -2.39 -0.02 0.23 16 44 H 0.20 -1.87 8.06 -2.91 -0.02 -1.90 16 45 H 0.18 -2.09 8.06 -2.91 -0.02 -2.11 16 46 H 0.17 -1.05 8.06 -2.91 -0.02 -1.07 16 47 H 0.08 -0.28 8.14 -2.39 -0.02 -0.30 16 48 H 0.07 -0.06 8.14 -2.39 -0.02 -0.08 16 49 H 0.10 -0.97 8.14 -2.39 -0.02 -0.99 16 50 H 0.09 -0.81 8.14 -2.38 -0.02 -0.82 16 51 H 0.19 1.09 6.19 -2.91 -0.02 1.08 16 Total: 0.00 -29.35 456.59 -2.30 -31.65 By element: Atomic # 1 Polarization: -18.03 SS G_CDS: -0.19 Total: -18.21 kcal Atomic # 6 Polarization: 6.26 SS G_CDS: 7.12 Total: 13.38 kcal Atomic # 7 Polarization: -5.52 SS G_CDS: -8.10 Total: -13.62 kcal Atomic # 8 Polarization: -7.84 SS G_CDS: -2.52 Total: -10.35 kcal Atomic # 14 Polarization: -3.94 SS G_CDS: 2.14 Total: -1.81 kcal Atomic # 17 Polarization: -0.30 SS G_CDS: -0.08 Total: -0.38 kcal Atomic # 35 Polarization: 0.02 SS G_CDS: -0.69 Total: -0.66 kcal Total: -29.35 -2.30 -31.65 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_12496662_12335884.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 62.622 kcal (2) G-P(sol) polarization free energy of solvation -29.350 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 33.271 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.301 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -31.651 kcal (6) G-S(sol) free energy of system = (1) + (5) 30.970 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.73 seconds