Wall clock time and date at job start Tue Mar 9 2021 13:08:58 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42892 * 1 3 3 Si 1.86295 * 109.47555 * 2 1 4 4 C 1.50709 * 109.47211 * 240.00151 * 2 1 3 5 5 C 1.35005 * 126.43036 * 149.95995 * 4 2 1 6 6 N 1.33582 * 108.65347 * 180.02562 * 5 4 2 7 7 C 1.32410 * 109.22374 * 0.02562 * 6 5 4 8 8 C 1.41250 * 132.11283 * 179.97438 * 7 6 5 9 9 Br 1.89110 * 120.25626 * 0.02792 * 8 7 6 10 10 C 1.35708 * 119.48987 * 179.69864 * 8 7 6 11 11 C 1.41751 * 119.52894 * 0.57579 * 10 8 7 12 12 C 1.47574 * 120.01277 * 179.73810 * 11 10 8 13 13 O 1.21592 * 120.00812 * 179.97438 * 12 11 10 14 14 N 1.34784 * 119.99508 * 359.72618 * 12 11 10 15 15 C 1.46499 * 119.99971 * 179.97438 * 14 12 11 16 16 H 1.09000 * 112.84831 * 336.19762 * 15 14 12 17 17 C 1.53784 * 113.61633 * 107.50076 * 15 14 12 18 18 C 1.53778 * 87.07731 * 89.11577 * 17 15 14 19 19 H 1.09004 * 113.69378 * 270.86945 * 18 17 15 20 20 S 1.81407 * 113.61049 * 139.98356 * 18 17 15 21 21 C 1.76200 * 102.99873 * 87.50383 * 20 18 17 22 22 C 1.38970 * 120.08161 * 359.72542 * 21 20 18 23 23 C 1.38086 * 119.91847 * 179.68326 * 22 21 20 24 24 C 1.38301 * 120.08048 * 0.61214 * 23 22 21 25 25 C 1.38309 * 120.15618 * 359.68569 * 24 23 22 26 26 C 1.38079 * 120.08317 * 359.97438 * 25 24 23 27 27 C 1.53776 * 113.61726 * 205.00181 * 15 14 12 28 28 C 1.36504 * 119.98179 * 359.46397 * 11 10 8 29 29 N 1.35944 * 120.50237 * 0.23216 * 28 11 10 30 30 H 0.96696 * 114.00565 * 300.00209 * 1 2 3 31 31 H 1.09003 * 109.47280 * 120.00404 * 2 1 3 32 32 H 1.48498 * 110.00545 * 178.67717 * 3 2 1 33 33 H 1.48506 * 110.00026 * 300.00387 * 3 2 1 34 34 H 1.08000 * 125.67151 * 0.06927 * 5 4 2 35 35 H 1.07997 * 120.23430 * 180.31340 * 10 8 7 36 36 H 0.96999 * 120.00044 * 359.97438 * 14 12 11 37 37 H 1.08996 * 113.61761 * 203.66784 * 17 15 14 38 38 H 1.09003 * 113.61097 * 334.57240 * 17 15 14 39 39 H 1.08002 * 120.03999 * 359.97438 * 22 21 20 40 40 H 1.08005 * 119.95908 * 180.32067 * 23 22 21 41 41 H 1.07996 * 119.92149 * 179.70008 * 24 23 22 42 42 H 1.08006 * 119.95749 * 180.02562 * 25 24 23 43 43 H 1.08000 * 120.03807 * 180.02562 * 26 25 24 44 44 H 1.09001 * 113.61142 * 25.42617 * 27 15 14 45 45 H 1.08999 * 113.61755 * 156.24875 * 27 15 14 46 46 H 1.08005 * 119.74594 * 180.25029 * 28 11 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7104 -1.2305 5 6 3.0851 -0.4607 -1.8856 6 7 3.1760 -1.2956 -2.9244 7 6 2.1064 -2.0756 -2.9517 8 6 1.7116 -3.1116 -3.8269 9 35 2.8119 -3.5969 -5.2864 10 6 0.5400 -3.7605 -3.6085 11 6 -0.2754 -3.3807 -2.5129 12 6 -1.5544 -4.0752 -2.2689 13 8 -2.2535 -3.7496 -1.3288 14 7 -1.9500 -5.0673 -3.0911 15 6 -3.2193 -5.7573 -2.8486 16 1 -3.5428 -5.6956 -1.8095 17 6 -4.3197 -5.3968 -3.8607 18 6 -3.7941 -6.5548 -4.7253 19 1 -3.0068 -6.2608 -5.4196 20 16 -5.1070 -7.5233 -5.5184 21 6 -5.3911 -6.6494 -7.0219 22 6 -4.6589 -5.5042 -7.3109 23 6 -4.8797 -4.8256 -8.4931 24 6 -5.8369 -5.2773 -9.3832 25 6 -6.5718 -6.4133 -9.0960 26 6 -6.3516 -7.1009 -7.9190 27 6 -3.2658 -7.1823 -3.4246 28 6 0.1255 -2.3759 -1.6804 29 7 1.3021 -1.7298 -1.8953 30 1 -0.3934 0.4417 0.7650 31 1 1.7923 -0.5139 0.8900 32 1 3.5346 1.7702 0.0322 33 1 1.5615 2.4679 -1.2085 34 1 3.8137 0.2889 -1.6143 35 1 0.2289 -4.5578 -4.2672 36 1 -1.3942 -5.3244 -3.8433 37 1 -5.3296 -5.5570 -3.4833 38 1 -4.1881 -4.4160 -4.3177 39 1 -3.9148 -5.1479 -6.6138 40 1 -4.3074 -3.9384 -8.7207 41 1 -6.0109 -4.7419 -10.3048 42 1 -7.3183 -6.7634 -9.7937 43 1 -6.9256 -7.9880 -7.6957 44 1 -2.2835 -7.6430 -3.5297 45 1 -3.9866 -7.8312 -2.9270 46 1 -0.4968 -2.0923 -0.8444 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_12525224_12335884.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:08:58 Heat of formation + Delta-G solvation = 101.760457 kcal Electronic energy + Delta-G solvation = -33349.089843 eV Core-core repulsion = 28766.671896 eV Total energy + Delta-G solvation = -4582.417947 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 460.024 amu Computer time = 1.28 seconds Orbital eigenvalues (eV) -44.38296 -41.58759 -39.88885 -39.65037 -38.41483 -37.90184 -35.56054 -34.56309 -32.58227 -32.07445 -31.95388 -31.89690 -30.34915 -27.17513 -26.90905 -26.82414 -25.32499 -24.20767 -23.70838 -23.45069 -22.63884 -22.12526 -20.78707 -19.40801 -18.78608 -18.69108 -18.60962 -17.99727 -17.77539 -17.49737 -16.99863 -16.51195 -16.42606 -16.17283 -15.99908 -15.87343 -15.78754 -15.56369 -15.39915 -15.04067 -14.88821 -14.67187 -14.42601 -14.22157 -14.18212 -13.83677 -13.60357 -13.42888 -13.36319 -13.21121 -13.12640 -12.84249 -12.25753 -12.10969 -12.10740 -11.90073 -11.70283 -11.67615 -11.57208 -11.43579 -11.36686 -11.07175 -10.78082 -10.74602 -10.33753 -10.10403 -9.98522 -9.16514 -8.39265 -5.01031 -0.98466 -0.47435 0.10613 0.21375 0.36854 0.54272 0.87753 1.05162 1.36214 1.39881 1.61592 1.66970 1.83947 2.01021 2.13756 2.66474 2.72520 2.94628 3.10584 3.25413 3.26752 3.30114 3.34022 3.47284 3.64684 3.78783 3.81403 3.90665 3.96676 3.99546 4.20058 4.22023 4.27815 4.35275 4.42285 4.44494 4.46010 4.52443 4.65863 4.66207 4.73230 4.76214 4.87080 4.88216 4.93572 5.01812 5.07949 5.25829 5.36969 5.41270 5.46397 5.53559 5.93360 6.21723 6.30625 6.73510 6.89293 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.570 6.570 2 C -0.051 4.051 3 Si 0.820 3.180 4 C -0.043 4.043 5 C 0.016 3.984 6 N -0.495 5.495 7 C 0.225 3.775 8 C -0.085 4.085 9 Br 0.007 6.993 10 C -0.019 4.019 11 C -0.174 4.174 12 C 0.587 3.413 13 O -0.557 6.557 14 N -0.691 5.691 15 C 0.128 3.872 16 H 0.107 0.893 17 C -0.135 4.135 18 C -0.100 4.100 19 H 0.124 0.876 20 S -0.128 6.128 21 C -0.097 4.097 22 C -0.140 4.140 23 C -0.110 4.110 24 C -0.134 4.134 25 C -0.109 4.109 26 C -0.120 4.120 27 C -0.104 4.104 28 C 0.171 3.829 29 N -0.357 5.357 30 H 0.415 0.585 31 H 0.111 0.889 32 H -0.272 1.272 33 H -0.309 1.309 34 H 0.201 0.799 35 H 0.189 0.811 36 H 0.415 0.585 37 H 0.104 0.896 38 H 0.076 0.924 39 H 0.135 0.865 40 H 0.141 0.859 41 H 0.141 0.859 42 H 0.143 0.857 43 H 0.129 0.871 44 H 0.105 0.895 45 H 0.111 0.889 46 H 0.197 0.803 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.713 0.352 3.484 3.898 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.381 6.381 2 C -0.159 4.159 3 Si 0.723 3.277 4 C -0.155 4.155 5 C -0.133 4.133 6 N -0.214 5.214 7 C -0.021 4.021 8 C -0.167 4.167 9 Br 0.092 6.908 10 C -0.045 4.045 11 C -0.181 4.181 12 C 0.373 3.627 13 O -0.436 6.436 14 N -0.343 5.343 15 C 0.021 3.979 16 H 0.125 0.875 17 C -0.176 4.176 18 C -0.229 4.229 19 H 0.142 0.858 20 S 0.119 5.881 21 C -0.209 4.209 22 C -0.164 4.164 23 C -0.130 4.130 24 C -0.155 4.155 25 C -0.129 4.129 26 C -0.144 4.144 27 C -0.144 4.144 28 C 0.045 3.955 29 N -0.030 5.030 30 H 0.269 0.731 31 H 0.128 0.872 32 H -0.198 1.198 33 H -0.237 1.237 34 H 0.217 0.783 35 H 0.206 0.794 36 H 0.254 0.746 37 H 0.122 0.878 38 H 0.095 0.905 39 H 0.153 0.847 40 H 0.159 0.841 41 H 0.159 0.841 42 H 0.161 0.839 43 H 0.147 0.853 44 H 0.123 0.877 45 H 0.130 0.870 46 H 0.214 0.786 Dipole moment (debyes) X Y Z Total from point charges -1.046 -0.359 2.659 2.879 hybrid contribution 0.099 0.697 -0.577 0.911 sum -0.947 0.338 2.081 2.311 Atomic orbital electron populations 1.86318 1.16725 1.82723 1.52382 1.24699 0.86328 1.11314 0.93574 0.94105 0.77909 0.71364 0.84335 1.21681 0.96714 0.95237 1.01835 1.22667 0.97316 1.00741 0.92549 1.70779 1.20572 1.08144 1.21863 1.20760 0.89869 0.99998 0.91457 1.20572 0.98837 0.99271 0.98014 1.96837 1.66823 1.90426 1.36691 1.21389 0.89902 0.97762 0.95399 1.19267 0.98454 1.01151 0.99234 1.17406 0.83714 0.79622 0.81940 1.90851 1.55712 1.65603 1.31386 1.45362 1.22617 1.35331 1.30945 1.21794 0.83184 0.92452 1.00514 0.87483 1.23756 0.99909 0.97838 0.96067 1.25189 0.98911 0.99750 0.99039 0.85824 1.85607 1.47582 1.38718 1.16187 1.21913 1.00781 0.99360 0.98872 1.21378 1.00782 0.95300 0.98912 1.21400 0.97944 1.00022 0.93604 1.21534 0.96380 0.97017 1.00529 1.21409 0.99615 0.95292 0.96536 1.21006 0.98041 1.00933 0.94420 1.23165 1.03773 0.95583 0.91855 1.22319 0.84543 0.89512 0.99107 1.42720 1.15220 1.24135 1.20959 0.73091 0.87177 1.19825 1.23722 0.78266 0.79427 0.74637 0.87795 0.90519 0.84684 0.84097 0.84072 0.83891 0.85308 0.87664 0.87044 0.78627 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.57 2.34 10.88 -148.98 -1.62 0.72 16 2 C -0.05 0.18 3.05 71.24 0.22 0.40 16 3 Si 0.82 -4.50 31.28 68.60 2.15 -2.35 16 4 C -0.04 -0.22 6.28 41.01 0.26 0.04 16 5 C 0.02 0.12 10.44 83.68 0.87 0.99 16 6 N -0.49 -5.88 11.30 -194.12 -2.19 -8.08 16 7 C 0.22 2.03 7.59 134.19 1.02 3.05 16 8 C -0.08 -0.35 6.24 22.42 0.14 -0.21 16 9 Br 0.01 0.02 33.72 -20.37 -0.69 -0.66 16 10 C -0.02 0.04 9.26 22.55 0.21 0.25 16 11 C -0.17 -0.04 5.84 -20.35 -0.12 -0.16 16 12 C 0.59 0.11 7.76 86.71 0.67 0.78 16 13 O -0.56 -4.07 15.87 -4.00 -0.06 -4.13 16 14 N -0.69 4.28 5.21 -443.15 -2.31 1.96 16 15 C 0.13 -0.71 4.32 45.52 0.20 -0.51 16 16 H 0.11 -0.26 7.47 -2.39 -0.02 -0.28 16 17 C -0.13 0.63 7.35 31.12 0.23 0.86 16 18 C -0.10 0.57 2.89 31.12 0.09 0.66 16 19 H 0.12 -1.00 6.88 -2.38 -0.02 -1.01 16 20 S -0.13 -0.07 21.72 -56.49 -1.23 -1.30 16 21 C -0.10 -0.29 6.11 22.62 0.14 -0.15 16 22 C -0.14 -0.13 9.32 22.41 0.21 0.08 16 23 C -0.11 -0.03 10.04 22.25 0.22 0.19 16 24 C -0.13 -0.05 10.04 22.30 0.22 0.17 16 25 C -0.11 -0.13 10.04 22.25 0.22 0.09 16 26 C -0.12 -0.39 9.79 22.41 0.22 -0.17 16 27 C -0.10 0.84 7.41 31.12 0.23 1.07 16 28 C 0.17 0.60 9.91 83.65 0.83 1.43 16 29 N -0.36 -2.35 2.93 -337.71 -0.99 -3.34 16 30 H 0.42 -6.15 8.74 -74.06 -0.65 -6.80 16 31 H 0.11 -0.92 7.96 -2.39 -0.02 -0.94 16 32 H -0.27 0.49 6.91 99.48 0.69 1.18 16 33 H -0.31 -1.38 7.11 99.48 0.71 -0.67 16 34 H 0.20 0.55 6.77 -2.91 -0.02 0.53 16 35 H 0.19 -1.93 6.44 -2.91 -0.02 -1.94 16 36 H 0.42 -4.87 6.73 -92.71 -0.62 -5.49 16 37 H 0.10 -0.34 8.10 -2.39 -0.02 -0.36 16 38 H 0.08 -0.27 8.14 -2.39 -0.02 -0.29 16 39 H 0.14 -0.39 5.64 -2.91 -0.02 -0.41 16 40 H 0.14 -0.52 8.06 -2.91 -0.02 -0.54 16 41 H 0.14 -0.51 8.06 -2.91 -0.02 -0.53 16 42 H 0.14 -0.41 8.06 -2.91 -0.02 -0.43 16 43 H 0.13 0.22 8.06 -2.91 -0.02 0.20 16 44 H 0.10 -1.13 8.14 -2.39 -0.02 -1.15 16 45 H 0.11 -0.86 8.10 -2.39 -0.02 -0.88 16 46 H 0.20 0.55 6.19 -2.91 -0.02 0.53 16 Total: 0.00 -26.56 418.16 -1.04 -27.60 By element: Atomic # 1 Polarization: -19.12 SS G_CDS: -0.17 Total: -19.29 kcal Atomic # 6 Polarization: 2.79 SS G_CDS: 6.08 Total: 8.87 kcal Atomic # 7 Polarization: -3.96 SS G_CDS: -5.50 Total: -9.46 kcal Atomic # 8 Polarization: -1.73 SS G_CDS: -1.68 Total: -3.41 kcal Atomic # 14 Polarization: -4.50 SS G_CDS: 2.15 Total: -2.35 kcal Atomic # 16 Polarization: -0.07 SS G_CDS: -1.23 Total: -1.30 kcal Atomic # 35 Polarization: 0.02 SS G_CDS: -0.69 Total: -0.66 kcal Total: -26.56 -1.04 -27.60 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_12525224_12335884.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 129.360 kcal (2) G-P(sol) polarization free energy of solvation -26.558 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 102.801 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.041 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -27.599 kcal (6) G-S(sol) free energy of system = (1) + (5) 101.760 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.28 seconds