Wall clock time and date at job start Tue Mar 9 2021 13:10:40 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42895 * 1 3 3 Si 1.86306 * 109.47117 * 2 1 4 4 C 1.50698 * 109.47276 * 240.00423 * 2 1 3 5 5 C 1.35007 * 126.43270 * 149.97222 * 4 2 1 6 6 N 1.33580 * 108.65655 * 180.02562 * 5 4 2 7 7 C 1.32413 * 109.22679 * 359.97438 * 6 5 4 8 8 C 1.41253 * 132.12147 * 179.97438 * 7 6 5 9 9 Br 1.89099 * 120.25230 * 0.02562 * 8 7 6 10 10 C 1.35702 * 119.48819 * 179.72166 * 8 7 6 11 11 C 1.41758 * 119.53342 * 0.55444 * 10 8 7 12 12 C 1.47572 * 120.01091 * 179.71663 * 11 10 8 13 13 O 1.21590 * 120.00209 * 179.72505 * 12 11 10 14 14 N 1.34776 * 120.00166 * 359.72923 * 12 11 10 15 15 C 1.46498 * 120.00544 * 179.97438 * 14 12 11 16 16 H 1.09005 * 112.85024 * 336.19755 * 15 14 12 17 17 C 1.53781 * 113.69228 * 107.46014 * 15 14 12 18 18 C 1.54049 * 87.07967 * 139.99035 * 17 15 14 19 19 C 1.53001 * 113.61110 * 89.07057 * 18 17 15 20 20 O 1.42900 * 109.46929 * 82.62515 * 19 18 17 21 21 C 1.50690 * 113.70084 * 220.05404 * 18 17 15 22 22 C 1.38234 * 120.00450 * 151.46137 * 21 18 17 23 23 C 1.38235 * 120.00182 * 179.79203 * 22 21 18 24 24 C 1.38236 * 119.99757 * 0.45764 * 23 22 21 25 25 C 1.38233 * 120.00260 * 359.77499 * 24 23 22 26 26 C 1.38235 * 119.99836 * 0.02562 * 25 24 23 27 27 C 1.53774 * 113.61797 * 204.99792 * 15 14 12 28 28 C 1.36491 * 119.98155 * 359.43991 * 11 10 8 29 29 N 1.35946 * 120.50659 * 0.28126 * 28 11 10 30 30 H 0.96699 * 114.00286 * 59.99546 * 1 2 3 31 31 H 1.08995 * 109.47452 * 120.00176 * 2 1 3 32 32 H 1.48497 * 110.00173 * 298.68513 * 3 2 1 33 33 H 1.48501 * 109.99611 * 60.00471 * 3 2 1 34 34 H 1.08003 * 125.66747 * 0.05683 * 5 4 2 35 35 H 1.08001 * 120.23441 * 180.27620 * 10 8 7 36 36 H 0.97005 * 120.00109 * 359.97438 * 14 12 11 37 37 H 1.09005 * 113.61680 * 254.54477 * 17 15 14 38 38 H 1.08997 * 113.61378 * 25.36162 * 17 15 14 39 39 H 1.08997 * 109.47514 * 202.62145 * 19 18 17 40 40 H 1.09001 * 109.47472 * 322.62416 * 19 18 17 41 41 H 0.96701 * 114.00294 * 179.97438 * 20 19 18 42 42 H 1.07994 * 119.99986 * 359.97438 * 22 21 18 43 43 H 1.08001 * 120.00072 * 180.25260 * 23 22 21 44 44 H 1.08005 * 119.99649 * 179.79509 * 24 23 22 45 45 H 1.07999 * 119.99844 * 180.02562 * 25 24 23 46 46 H 1.08001 * 119.99957 * 179.97438 * 26 25 24 47 47 H 1.09000 * 113.61513 * 334.48407 * 27 15 14 48 48 H 1.09001 * 113.61869 * 105.30002 * 27 15 14 49 49 H 1.08007 * 119.75246 * 180.29718 * 28 11 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7103 -1.2305 5 6 3.0852 -0.4607 -1.8854 6 7 3.1761 -1.2955 -2.9243 7 6 2.1069 -2.0761 -2.9512 8 6 1.7122 -3.1123 -3.8263 9 35 2.8120 -3.5969 -5.2863 10 6 0.5408 -3.7615 -3.6076 11 6 -0.2743 -3.3820 -2.5116 12 6 -1.5533 -4.0766 -2.2675 13 8 -2.2499 -3.7544 -1.3245 14 7 -1.9492 -5.0682 -3.0899 15 6 -3.2186 -5.7582 -2.8475 16 1 -3.5419 -5.6970 -1.8083 17 6 -4.3206 -5.3977 -3.8576 18 6 -4.7166 -6.8863 -3.8374 19 6 -5.7441 -7.2325 -2.7578 20 8 -7.0560 -6.9234 -3.2324 21 6 -5.0824 -7.4343 -5.1926 22 6 -4.8876 -8.7740 -5.4722 23 6 -5.2272 -9.2775 -6.7140 24 6 -5.7528 -8.4393 -7.6794 25 6 -5.9432 -7.0986 -7.4015 26 6 -5.6075 -6.5960 -6.1583 27 6 -3.2653 -7.1830 -3.4241 28 6 0.1268 -2.3778 -1.6787 29 7 1.3030 -1.7311 -1.8941 30 1 -0.3934 0.4417 -0.7650 31 1 1.7923 -0.5138 0.8899 32 1 1.5878 2.4587 -1.2241 33 1 1.5615 2.4678 1.2086 34 1 3.8139 0.2889 -1.6141 35 1 0.2294 -4.5585 -4.2665 36 1 -1.3937 -5.3252 -3.8425 37 1 -5.0862 -4.7366 -3.4513 38 1 -3.9370 -5.0597 -4.8202 39 1 -5.6829 -8.2957 -2.5255 40 1 -5.5366 -6.6518 -1.8591 41 1 -7.7597 -7.1183 -2.5983 42 1 -4.4728 -9.4279 -4.7194 43 1 -5.0787 -10.3250 -6.9310 44 1 -6.0151 -8.8320 -8.6507 45 1 -6.3543 -6.4439 -8.1557 46 1 -5.7558 -5.5485 -5.9413 47 1 -2.5932 -7.3344 -4.2687 48 1 -3.1774 -7.9632 -2.6681 49 1 -0.4948 -2.0950 -0.8420 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_13270510_12335884.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:10:40 Heat of formation + Delta-G solvation = 44.359039 kcal Electronic energy + Delta-G solvation = -36296.373129 eV Core-core repulsion = 31431.857772 eV Total energy + Delta-G solvation = -4864.515357 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 458.067 amu Computer time = 1.36 seconds Orbital eigenvalues (eV) -44.27698 -41.93229 -40.77407 -39.09069 -38.49397 -38.08832 -37.18732 -35.49406 -34.82557 -32.69269 -31.91380 -31.79362 -31.49459 -30.27812 -28.31163 -26.95424 -26.91696 -25.91083 -24.51399 -24.09761 -23.15469 -22.74728 -22.40574 -21.81127 -19.90058 -19.53490 -18.65994 -18.42527 -18.26861 -17.98138 -17.71424 -17.50676 -17.14057 -16.36338 -16.29179 -16.13304 -16.08627 -15.93834 -15.75994 -15.66258 -15.45275 -15.28377 -14.85758 -14.68586 -14.38007 -14.26196 -14.12111 -13.73205 -13.52194 -13.44172 -13.37483 -13.33437 -13.15023 -13.00137 -12.77499 -12.46442 -12.27580 -12.16553 -12.08615 -11.57313 -11.50088 -11.39923 -11.37436 -11.33894 -11.26691 -11.07648 -10.81197 -10.27284 -10.01942 -9.77153 -9.55403 -9.10201 -4.95067 -0.93125 -0.40232 0.17413 0.50111 0.54778 0.94969 1.11216 1.39277 1.66495 1.79153 1.90123 2.00567 2.19409 2.80016 2.90584 2.97479 3.05092 3.12704 3.29202 3.34165 3.42595 3.46164 3.65266 3.69123 3.83594 3.88673 4.03547 4.12791 4.18848 4.19417 4.28240 4.31717 4.35940 4.40292 4.45103 4.47143 4.51194 4.56003 4.64948 4.71657 4.76769 4.80078 4.92915 4.97352 4.98876 5.03865 5.18390 5.19715 5.31350 5.40285 5.54924 5.63215 5.67657 5.74170 6.15938 6.16804 6.27895 6.48442 6.87964 6.93115 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.547 6.547 2 C -0.053 4.053 3 Si 0.816 3.184 4 C -0.089 4.089 5 C 0.045 3.955 6 N -0.492 5.492 7 C 0.224 3.776 8 C -0.079 4.079 9 Br 0.006 6.994 10 C -0.026 4.026 11 C -0.169 4.169 12 C 0.580 3.420 13 O -0.565 6.565 14 N -0.695 5.695 15 C 0.124 3.876 16 H 0.110 0.890 17 C -0.136 4.136 18 C -0.040 4.040 19 C 0.098 3.902 20 O -0.587 6.587 21 C -0.054 4.054 22 C -0.123 4.123 23 C -0.129 4.129 24 C -0.137 4.137 25 C -0.133 4.133 26 C -0.119 4.119 27 C -0.115 4.115 28 C 0.157 3.843 29 N -0.359 5.359 30 H 0.386 0.614 31 H 0.139 0.861 32 H -0.290 1.290 33 H -0.289 1.289 34 H 0.229 0.771 35 H 0.184 0.816 36 H 0.416 0.584 37 H 0.064 0.936 38 H 0.094 0.906 39 H 0.062 0.938 40 H 0.059 0.941 41 H 0.395 0.605 42 H 0.134 0.866 43 H 0.135 0.865 44 H 0.131 0.869 45 H 0.127 0.873 46 H 0.117 0.883 47 H 0.109 0.891 48 H 0.097 0.903 49 H 0.190 0.810 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.204 -2.737 0.616 3.053 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.354 6.354 2 C -0.161 4.161 3 Si 0.718 3.282 4 C -0.200 4.200 5 C -0.104 4.104 6 N -0.211 5.211 7 C -0.021 4.021 8 C -0.162 4.162 9 Br 0.092 6.908 10 C -0.052 4.052 11 C -0.176 4.176 12 C 0.366 3.634 13 O -0.445 6.445 14 N -0.346 5.346 15 C 0.019 3.981 16 H 0.128 0.872 17 C -0.175 4.175 18 C -0.041 4.041 19 C 0.020 3.980 20 O -0.395 6.395 21 C -0.054 4.054 22 C -0.141 4.141 23 C -0.147 4.147 24 C -0.155 4.155 25 C -0.151 4.151 26 C -0.137 4.137 27 C -0.153 4.153 28 C 0.030 3.970 29 N -0.032 5.032 30 H 0.235 0.765 31 H 0.157 0.843 32 H -0.217 1.217 33 H -0.216 1.216 34 H 0.245 0.755 35 H 0.201 0.799 36 H 0.254 0.746 37 H 0.083 0.917 38 H 0.112 0.888 39 H 0.080 0.920 40 H 0.077 0.923 41 H 0.244 0.756 42 H 0.152 0.848 43 H 0.153 0.847 44 H 0.149 0.851 45 H 0.145 0.855 46 H 0.135 0.865 47 H 0.127 0.873 48 H 0.115 0.885 49 H 0.207 0.793 Dipole moment (debyes) X Y Z Total from point charges 2.022 -1.972 0.253 2.835 hybrid contribution -2.290 -0.240 0.376 2.333 sum -0.268 -2.212 0.629 2.315 Atomic orbital electron populations 1.86589 1.18368 1.80114 1.50373 1.25208 0.83339 1.12323 0.95190 0.93464 0.89309 0.68700 0.76748 1.22421 0.98436 0.96480 1.02681 1.23039 0.96454 0.99939 0.90954 1.70842 1.19867 1.08078 1.22320 1.20723 0.90040 0.99953 0.91427 1.20583 0.98510 0.99156 0.97917 1.96843 1.66692 1.90541 1.36747 1.21342 0.90262 0.98092 0.95514 1.19259 0.98241 1.00985 0.99162 1.17590 0.83893 0.79859 0.82022 1.90842 1.56115 1.66031 1.31487 1.45702 1.23081 1.35114 1.30709 1.22580 0.82687 0.92650 1.00182 0.87221 1.23594 0.98015 0.95625 1.00271 1.20588 0.94686 0.96433 0.92400 1.21998 0.82136 0.99712 0.94141 1.86474 1.16682 1.88997 1.47305 1.19450 0.98280 0.93620 0.94077 1.21157 1.00694 0.94855 0.97348 1.21398 0.98971 1.00517 0.93771 1.21394 0.99973 0.93952 1.00212 1.21364 1.00279 0.96145 0.97305 1.21097 0.99084 1.00006 0.93482 1.23417 0.93964 0.95838 1.02111 1.22212 0.85208 0.90548 0.98988 1.42749 1.15037 1.24195 1.21242 0.76461 0.84335 1.21704 1.21620 0.75494 0.79862 0.74559 0.91683 0.88793 0.91987 0.92289 0.75593 0.84778 0.84745 0.85146 0.85463 0.86456 0.87304 0.88458 0.79289 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -0.02 10.90 -148.98 -1.62 -1.64 16 2 C -0.05 0.17 3.06 71.24 0.22 0.38 16 3 Si 0.82 -4.39 31.18 68.60 2.14 -2.26 16 4 C -0.09 -0.05 6.24 41.01 0.26 0.21 16 5 C 0.05 0.03 10.44 83.68 0.87 0.90 16 6 N -0.49 -3.45 11.30 -194.10 -2.19 -5.65 16 7 C 0.22 1.32 7.59 134.18 1.02 2.34 16 8 C -0.08 -0.20 6.24 22.42 0.14 -0.06 16 9 Br 0.01 0.01 33.72 -20.37 -0.69 -0.67 16 10 C -0.03 0.06 9.26 22.55 0.21 0.27 16 11 C -0.17 -0.02 5.84 -20.35 -0.12 -0.14 16 12 C 0.58 0.82 7.76 86.71 0.67 1.50 16 13 O -0.56 -5.05 15.87 -4.00 -0.06 -5.11 16 14 N -0.70 3.11 5.31 -443.17 -2.35 0.76 16 15 C 0.12 -0.46 3.89 45.52 0.18 -0.29 16 16 H 0.11 -0.09 6.98 -2.38 -0.02 -0.10 16 17 C -0.14 0.27 5.99 31.21 0.19 0.46 16 18 C -0.04 0.12 0.90 -52.31 -0.05 0.07 16 19 C 0.10 -0.28 6.39 71.98 0.46 0.18 16 20 O -0.59 -0.39 13.13 -148.98 -1.96 -2.34 16 21 C -0.05 -0.04 4.33 -19.87 -0.09 -0.12 16 22 C -0.12 0.01 9.39 22.27 0.21 0.22 16 23 C -0.13 -0.09 10.05 22.27 0.22 0.13 16 24 C -0.14 -0.25 10.05 22.27 0.22 -0.03 16 25 C -0.13 -0.37 10.05 22.27 0.22 -0.15 16 26 C -0.12 -0.35 9.03 22.27 0.20 -0.15 16 27 C -0.12 0.82 6.61 31.12 0.21 1.03 16 28 C 0.16 0.36 9.91 83.65 0.83 1.19 16 29 N -0.36 -1.24 2.93 -337.70 -0.99 -2.23 16 30 H 0.39 -1.57 8.70 -74.06 -0.64 -2.22 16 31 H 0.14 -0.76 7.96 -2.39 -0.02 -0.78 16 32 H -0.29 -0.19 7.11 99.48 0.71 0.52 16 33 H -0.29 -0.43 7.11 99.48 0.71 0.28 16 34 H 0.23 -1.84 6.90 -2.91 -0.02 -1.86 16 35 H 0.18 -1.76 6.44 -2.91 -0.02 -1.78 16 36 H 0.42 -4.16 6.76 -92.70 -0.63 -4.79 16 37 H 0.06 0.10 8.10 -2.38 -0.02 0.08 16 38 H 0.09 -0.23 7.45 -2.39 -0.02 -0.25 16 39 H 0.06 -0.32 8.14 -2.39 -0.02 -0.34 16 40 H 0.06 -0.25 7.34 -2.39 -0.02 -0.27 16 41 H 0.39 -2.75 9.12 -74.06 -0.68 -3.42 16 42 H 0.13 -0.54 8.03 -2.91 -0.02 -0.56 16 43 H 0.13 -0.39 8.06 -2.91 -0.02 -0.41 16 44 H 0.13 -0.17 8.06 -2.91 -0.02 -0.19 16 45 H 0.13 0.02 8.06 -2.91 -0.02 0.00 16 46 H 0.12 0.30 7.02 -2.91 -0.02 0.28 16 47 H 0.11 -0.98 8.07 -2.39 -0.02 -1.00 16 48 H 0.10 -0.90 8.10 -2.39 -0.02 -0.92 16 49 H 0.19 0.53 6.20 -2.91 -0.02 0.51 16 Total: 0.00 -25.93 427.06 -2.51 -28.44 By element: Atomic # 1 Polarization: -16.37 SS G_CDS: -0.85 Total: -17.22 kcal Atomic # 6 Polarization: 1.85 SS G_CDS: 6.07 Total: 7.93 kcal Atomic # 7 Polarization: -1.58 SS G_CDS: -5.54 Total: -7.12 kcal Atomic # 8 Polarization: -5.46 SS G_CDS: -3.64 Total: -9.10 kcal Atomic # 14 Polarization: -4.39 SS G_CDS: 2.14 Total: -2.26 kcal Atomic # 35 Polarization: 0.01 SS G_CDS: -0.69 Total: -0.67 kcal Total: -25.93 -2.51 -28.44 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_13270510_12335884.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 72.800 kcal (2) G-P(sol) polarization free energy of solvation -25.935 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 46.865 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.506 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -28.441 kcal (6) G-S(sol) free energy of system = (1) + (5) 44.359 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.36 seconds