Wall clock time and date at job start Tue Mar 9 2021 13:16:20 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42897 * 1 3 3 Si 1.86300 * 109.47568 * 2 1 4 4 C 1.50705 * 109.47109 * 240.00006 * 2 1 3 5 5 C 1.35009 * 126.42619 * 150.00504 * 4 2 1 6 6 N 1.33594 * 108.64834 * 179.46884 * 5 4 2 7 7 C 1.32420 * 109.22213 * 0.61627 * 6 5 4 8 8 C 1.41252 * 132.11199 * 179.29726 * 7 6 5 9 9 Br 1.89099 * 120.25784 * 359.97438 * 8 7 6 10 10 C 1.35698 * 119.48561 * 180.02562 * 8 7 6 11 11 C 1.41769 * 119.53568 * 359.97438 * 10 8 7 12 12 C 1.47572 * 120.00974 * 180.02562 * 11 10 8 13 13 O 1.21597 * 119.99646 * 179.97438 * 12 11 10 14 14 N 1.34771 * 120.00452 * 359.97438 * 12 11 10 15 15 C 1.46493 * 120.00418 * 180.02562 * 14 12 11 16 16 H 1.09003 * 109.47430 * 34.99863 * 15 14 12 17 17 C 1.52998 * 109.47614 * 154.99764 * 15 14 12 18 18 C 1.52995 * 109.47392 * 179.97438 * 17 15 14 19 19 C 1.53000 * 109.47712 * 300.00254 * 18 17 15 20 20 H 1.09003 * 109.46787 * 300.00374 * 19 18 17 21 21 C 1.50698 * 109.47548 * 179.97438 * 19 18 17 22 22 N 1.30639 * 119.25220 * 334.72355 * 21 19 18 23 23 C 1.33519 * 121.50336 * 179.76183 * 22 21 19 24 24 C 1.36198 * 119.90957 * 0.51046 * 23 22 21 25 25 C 1.41023 * 118.59365 * 359.75915 * 24 23 22 26 26 O 1.21980 * 120.70734 * 179.97438 * 25 24 23 27 27 N 1.34743 * 119.25209 * 155.00375 * 21 19 18 28 28 C 1.52998 * 109.46899 * 59.99444 * 19 18 17 29 29 C 1.52997 * 109.47048 * 275.00134 * 15 14 12 30 30 C 1.36500 * 119.97677 * 0.02562 * 11 10 8 31 31 N 1.35942 * 120.50680 * 0.27628 * 30 11 10 32 32 H 0.96698 * 113.99948 * 59.99609 * 1 2 3 33 33 H 1.09002 * 109.47297 * 119.99829 * 2 1 3 34 34 H 1.48499 * 109.99777 * 298.68432 * 3 2 1 35 35 H 1.48503 * 109.99865 * 59.99912 * 3 2 1 36 36 H 1.07992 * 125.67831 * 0.03136 * 5 4 2 37 37 H 1.08000 * 120.23767 * 179.97438 * 10 8 7 38 38 H 0.97005 * 119.99996 * 359.97438 * 14 12 11 39 39 H 1.08995 * 109.47387 * 300.00300 * 17 15 14 40 40 H 1.09003 * 109.47018 * 60.00001 * 17 15 14 41 41 H 1.09003 * 109.47300 * 60.00314 * 18 17 15 42 42 H 1.09003 * 109.47086 * 179.97438 * 18 17 15 43 43 H 1.07999 * 120.04668 * 180.27212 * 23 22 21 44 44 H 1.08004 * 120.70567 * 179.73220 * 24 23 22 45 45 H 0.96999 * 120.04821 * 359.97438 * 27 21 19 46 46 H 1.09003 * 109.47018 * 60.00455 * 28 19 18 47 47 H 1.08995 * 109.47387 * 180.02562 * 28 19 18 48 48 H 1.09003 * 109.46911 * 299.99587 * 29 15 14 49 49 H 1.08996 * 109.47750 * 59.99866 * 29 15 14 50 50 H 1.08002 * 119.74245 * 179.97438 * 30 11 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7104 -1.2305 5 6 3.0856 -0.4612 -1.8850 6 7 3.1821 -1.3042 -2.9169 7 6 2.1095 -2.0802 -2.9477 8 6 1.7125 -3.1128 -3.8259 9 35 2.8125 -3.5980 -5.2855 10 6 0.5349 -3.7533 -3.6147 11 6 -0.2781 -3.3768 -2.5160 12 6 -1.5604 -4.0667 -2.2762 13 8 -2.2574 -3.7439 -1.3335 14 7 -1.9590 -5.0545 -3.1018 15 6 -3.2322 -5.7389 -2.8641 16 1 -3.9588 -5.0283 -2.4701 17 6 -3.7512 -6.3223 -4.1798 18 6 -5.0806 -7.0377 -3.9313 19 6 -4.8711 -8.1668 -2.9203 20 1 -4.1444 -8.8772 -3.3144 21 6 -6.1807 -8.8710 -2.6751 22 7 -7.2993 -8.2250 -2.8702 23 6 -8.4846 -8.8064 -2.6713 24 6 -8.5443 -10.0988 -2.2456 25 6 -7.3368 -10.7946 -2.0297 26 8 -7.3452 -11.9532 -1.6481 27 7 -6.1713 -10.1510 -2.2541 28 6 -4.3521 -7.5834 -1.6046 29 6 -3.0232 -6.8679 -1.8529 30 6 0.1255 -2.3760 -1.6802 31 7 1.3022 -1.7300 -1.8950 32 1 -0.3933 0.4417 -0.7650 33 1 1.7923 -0.5138 0.8900 34 1 1.5880 2.4585 -1.2242 35 1 1.5616 2.4679 1.2085 36 1 3.8143 0.2882 -1.6137 37 1 0.2193 -4.5443 -4.2788 38 1 -1.4032 -5.3118 -3.8541 39 1 -3.9001 -5.5181 -4.9002 40 1 -3.0247 -7.0330 -4.5738 41 1 -5.8074 -6.3274 -3.5371 42 1 -5.4506 -7.4529 -4.8688 43 1 -9.3949 -8.2515 -2.8441 44 1 -9.4961 -10.5804 -2.0766 45 1 -5.3283 -10.6095 -2.1123 46 1 -5.0788 -6.8730 -1.2104 47 1 -4.2024 -8.3878 -0.8844 48 1 -2.2967 -7.5786 -2.2468 49 1 -2.6535 -6.4524 -0.9155 50 1 -0.4970 -2.0920 -0.8446 There are 75 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 75 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_13456076_12335884.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:16:20 Heat of formation + Delta-G solvation = 32.571289 kcal Electronic energy + Delta-G solvation = -38275.685182 eV Core-core repulsion = 33124.269229 eV Total energy + Delta-G solvation = -5151.415953 eV No. of doubly occupied orbitals = 75 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 474.074 amu Computer time = 1.48 seconds Orbital eigenvalues (eV) -44.24947 -42.89529 -41.37497 -39.77071 -38.71820 -38.37180 -38.02071 -35.97574 -35.42084 -35.06136 -33.00872 -32.23456 -31.82282 -31.72778 -30.30424 -29.99634 -26.90806 -26.29501 -25.56641 -24.91662 -24.07648 -23.70733 -22.82318 -22.47043 -21.68445 -20.91802 -19.77410 -19.53098 -19.17536 -18.68914 -18.23814 -17.83186 -17.78006 -17.53333 -17.08699 -17.05378 -16.36363 -16.27642 -16.08340 -15.89094 -15.81122 -15.63358 -15.54996 -15.16295 -15.10736 -14.87692 -14.65273 -14.43738 -14.11480 -14.06861 -13.99372 -13.47663 -13.44473 -13.31794 -13.15896 -12.99702 -12.76546 -12.51489 -12.33842 -12.15824 -12.10151 -12.02775 -11.60358 -11.53315 -11.40610 -11.37037 -11.34657 -11.28907 -11.17700 -11.07681 -11.05676 -10.22704 -9.98494 -9.66741 -9.07586 -4.94531 -0.89469 -0.45191 -0.36287 0.20913 0.68067 0.97097 1.15116 1.41949 1.56428 1.66971 1.82510 1.92366 2.02865 2.24899 2.50435 2.78255 2.83378 2.99206 3.15774 3.37579 3.43476 3.46275 3.48580 3.59525 3.65909 3.73199 3.86877 3.98528 4.14187 4.17358 4.20367 4.29745 4.31692 4.37499 4.39157 4.41569 4.45848 4.50556 4.50679 4.54816 4.66956 4.85036 4.88675 4.97398 5.03056 5.10148 5.18781 5.24517 5.32215 5.33234 5.35487 5.38291 5.47906 5.55803 5.58515 6.18091 6.36280 6.50665 6.66837 6.71125 7.02468 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.547 6.547 2 C -0.052 4.052 3 Si 0.815 3.185 4 C -0.091 4.091 5 C 0.045 3.955 6 N -0.494 5.494 7 C 0.223 3.777 8 C -0.080 4.080 9 Br 0.006 6.994 10 C -0.024 4.024 11 C -0.168 4.168 12 C 0.578 3.422 13 O -0.565 6.565 14 N -0.701 5.701 15 C 0.143 3.857 16 H 0.073 0.927 17 C -0.119 4.119 18 C -0.093 4.093 19 C -0.040 4.040 20 H 0.133 0.867 21 C 0.409 3.591 22 N -0.544 5.544 23 C 0.173 3.827 24 C -0.320 4.320 25 C 0.509 3.491 26 O -0.593 6.593 27 N -0.615 5.615 28 C -0.104 4.104 29 C -0.122 4.122 30 C 0.153 3.847 31 N -0.359 5.359 32 H 0.386 0.614 33 H 0.138 0.862 34 H -0.290 1.290 35 H -0.290 1.290 36 H 0.228 0.772 37 H 0.189 0.811 38 H 0.416 0.584 39 H 0.083 0.917 40 H 0.097 0.903 41 H 0.074 0.926 42 H 0.081 0.919 43 H 0.197 0.803 44 H 0.158 0.842 45 H 0.429 0.571 46 H 0.063 0.937 47 H 0.076 0.924 48 H 0.092 0.908 49 H 0.054 0.946 50 H 0.188 0.812 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.490 2.824 -3.786 5.873 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.354 6.354 2 C -0.160 4.160 3 Si 0.716 3.284 4 C -0.202 4.202 5 C -0.104 4.104 6 N -0.213 5.213 7 C -0.022 4.022 8 C -0.163 4.163 9 Br 0.092 6.908 10 C -0.049 4.049 11 C -0.175 4.175 12 C 0.364 3.636 13 O -0.445 6.445 14 N -0.352 5.352 15 C 0.039 3.961 16 H 0.091 0.909 17 C -0.157 4.157 18 C -0.131 4.131 19 C -0.061 4.061 20 H 0.151 0.849 21 C 0.145 3.855 22 N -0.267 5.267 23 C 0.034 3.966 24 C -0.344 4.344 25 C 0.309 3.691 26 O -0.476 6.476 27 N -0.253 5.253 28 C -0.143 4.143 29 C -0.161 4.161 30 C 0.027 3.973 31 N -0.032 5.032 32 H 0.236 0.764 33 H 0.156 0.844 34 H -0.217 1.217 35 H -0.217 1.217 36 H 0.244 0.756 37 H 0.206 0.794 38 H 0.255 0.745 39 H 0.102 0.898 40 H 0.116 0.884 41 H 0.093 0.907 42 H 0.100 0.900 43 H 0.214 0.786 44 H 0.175 0.825 45 H 0.269 0.731 46 H 0.082 0.918 47 H 0.095 0.905 48 H 0.111 0.889 49 H 0.073 0.927 50 H 0.205 0.795 Dipole moment (debyes) X Y Z Total from point charges 3.623 3.502 -3.664 6.230 hybrid contribution -1.733 -1.301 0.721 2.284 sum 1.890 2.201 -2.944 4.133 Atomic orbital electron populations 1.86591 1.18354 1.80104 1.50389 1.25184 0.83345 1.12260 0.95207 0.93469 0.89359 0.68793 0.76755 1.22390 0.98529 0.96595 1.02641 1.23022 0.96434 0.99850 0.91137 1.70849 1.19913 1.08062 1.22447 1.20766 0.89767 0.99997 0.91631 1.20598 0.98487 0.99346 0.97842 1.96846 1.66791 1.90494 1.36716 1.21382 0.90060 0.98008 0.95497 1.19315 0.98330 1.00958 0.98928 1.17542 0.83945 0.79803 0.82266 1.90858 1.55961 1.66326 1.31380 1.45783 1.23367 1.35347 1.30728 1.21141 0.84227 0.93686 0.97018 0.90902 1.21813 0.97523 1.01229 0.95159 1.21328 0.97347 0.96098 0.98360 1.20700 0.88369 0.98499 0.98488 0.84948 1.23761 0.97679 0.80083 0.83993 1.68389 0.97222 1.35665 1.25458 1.23170 0.96655 0.91215 0.85591 1.23000 0.98706 0.98308 1.14382 1.17661 0.85391 0.86939 0.79070 1.90990 1.87274 1.18600 1.50772 1.44632 1.12474 1.13538 1.54609 1.21488 0.97244 1.00427 0.95178 1.21840 0.97360 0.97541 0.99327 1.22222 0.85221 0.90734 0.99126 1.42736 1.15001 1.24165 1.21313 0.76449 0.84428 1.21652 1.21675 0.75625 0.79417 0.74497 0.89800 0.88421 0.90700 0.90011 0.78574 0.82457 0.73078 0.91792 0.90526 0.88937 0.92747 0.79480 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 0.33 10.90 -148.98 -1.62 -1.29 16 2 C -0.05 0.19 3.06 71.24 0.22 0.41 16 3 Si 0.81 -4.72 31.18 68.60 2.14 -2.58 16 4 C -0.09 0.02 6.24 41.01 0.26 0.27 16 5 C 0.04 0.00 10.44 83.68 0.87 0.87 16 6 N -0.49 -3.01 11.30 -194.10 -2.19 -5.21 16 7 C 0.22 1.04 7.59 134.18 1.02 2.06 16 8 C -0.08 -0.06 6.24 22.42 0.14 0.08 16 9 Br 0.01 0.00 33.72 -20.37 -0.69 -0.68 16 10 C -0.02 0.12 9.26 22.55 0.21 0.33 16 11 C -0.17 0.34 5.84 -20.35 -0.12 0.22 16 12 C 0.58 -0.76 7.73 86.71 0.67 -0.09 16 13 O -0.57 -3.86 15.94 -4.02 -0.06 -3.93 16 14 N -0.70 6.02 5.03 -445.68 -2.24 3.77 16 15 C 0.14 -1.21 2.45 44.99 0.11 -1.10 16 16 H 0.07 -0.21 7.58 -2.39 -0.02 -0.23 16 17 C -0.12 1.59 5.39 30.59 0.16 1.76 16 18 C -0.09 1.01 4.67 30.59 0.14 1.15 16 19 C -0.04 0.45 2.48 -11.54 -0.03 0.42 16 20 H 0.13 -2.19 8.14 -2.39 -0.02 -2.21 16 21 C 0.41 -2.01 6.73 138.18 0.93 -1.08 16 22 N -0.54 1.21 9.12 -187.57 -1.71 -0.50 16 23 C 0.17 -0.36 11.20 83.96 0.94 0.58 16 24 C -0.32 -0.85 10.07 22.48 0.23 -0.62 16 25 C 0.51 3.44 7.75 84.89 0.66 4.10 16 26 O -0.59 -9.67 17.97 -5.25 -0.09 -9.76 16 27 N -0.62 1.30 5.25 -310.69 -1.63 -0.33 16 28 C -0.10 0.93 5.18 30.58 0.16 1.09 16 29 C -0.12 1.07 5.49 30.58 0.17 1.24 16 30 C 0.15 0.14 9.91 83.65 0.83 0.97 16 31 N -0.36 -0.84 2.93 -337.70 -0.99 -1.83 16 32 H 0.39 -1.87 8.70 -74.06 -0.64 -2.51 16 33 H 0.14 -0.81 7.96 -2.39 -0.02 -0.83 16 34 H -0.29 -0.04 7.11 99.48 0.71 0.67 16 35 H -0.29 -0.33 7.11 99.48 0.71 0.37 16 36 H 0.23 -1.94 6.90 -2.91 -0.02 -1.96 16 37 H 0.19 -2.44 6.44 -2.91 -0.02 -2.45 16 38 H 0.42 -6.17 6.64 -92.70 -0.62 -6.79 16 39 H 0.08 -1.10 8.14 -2.39 -0.02 -1.12 16 40 H 0.10 -1.71 8.14 -2.39 -0.02 -1.73 16 41 H 0.07 -0.53 7.75 -2.39 -0.02 -0.55 16 42 H 0.08 -0.89 8.14 -2.39 -0.02 -0.91 16 43 H 0.20 -1.62 8.06 -2.91 -0.02 -1.64 16 44 H 0.16 0.26 8.06 -2.91 -0.02 0.23 16 45 H 0.43 -2.94 8.78 -92.71 -0.81 -3.75 16 46 H 0.06 -0.32 8.14 -2.39 -0.02 -0.34 16 47 H 0.08 -0.72 8.14 -2.39 -0.02 -0.74 16 48 H 0.09 -1.17 8.14 -2.39 -0.02 -1.19 16 49 H 0.05 -0.17 8.14 -2.39 -0.02 -0.19 16 50 H 0.19 0.32 6.19 -2.91 -0.02 0.30 16 Total: 0.00 -34.75 433.48 -2.51 -37.26 By element: Atomic # 1 Polarization: -26.58 SS G_CDS: -0.97 Total: -27.55 kcal Atomic # 6 Polarization: 5.09 SS G_CDS: 7.56 Total: 12.65 kcal Atomic # 7 Polarization: 4.67 SS G_CDS: -8.77 Total: -4.10 kcal Atomic # 8 Polarization: -13.20 SS G_CDS: -1.78 Total: -14.99 kcal Atomic # 14 Polarization: -4.72 SS G_CDS: 2.14 Total: -2.58 kcal Atomic # 35 Polarization: 0.00 SS G_CDS: -0.69 Total: -0.68 kcal Total: -34.75 -2.51 -37.26 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_13456076_12335884.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 69.829 kcal (2) G-P(sol) polarization free energy of solvation -34.751 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 35.079 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.507 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.258 kcal (6) G-S(sol) free energy of system = (1) + (5) 32.571 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.48 seconds