Wall clock time and date at job start Tue Mar 9 2021 13:29:02 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45202 * 1 3 3 C 1.34225 * 117.00232 * 2 1 4 4 O 1.20830 * 119.99788 * 0.02562 * 3 2 1 5 5 C 1.50702 * 120.00464 * 180.02562 * 3 2 1 6 6 H 1.08998 * 109.46667 * 300.00276 * 5 3 2 7 7 C 1.52999 * 109.46838 * 59.99609 * 5 3 2 8 8 C 1.53001 * 109.46805 * 180.02562 * 7 5 3 9 9 C 1.53002 * 109.47252 * 300.00050 * 8 7 5 10 10 H 1.09002 * 109.47280 * 300.00523 * 9 8 7 11 11 N 1.46493 * 109.46954 * 180.02562 * 9 8 7 12 12 C 1.34776 * 120.00154 * 85.00505 * 11 9 8 13 13 O 1.21594 * 119.99988 * 359.97438 * 12 11 9 14 14 C 1.47578 * 120.00117 * 179.97438 * 12 11 9 15 15 C 1.36494 * 120.01202 * 179.97438 * 14 12 11 16 16 N 1.35941 * 120.50851 * 179.97438 * 15 14 12 17 17 C 1.37009 * 132.41483 * 179.97438 * 16 15 14 18 18 C 1.50692 * 126.42533 * 0.02562 * 17 16 15 19 19 O 1.42902 * 109.47641 * 29.99854 * 18 17 16 20 20 Si 1.86299 * 109.47162 * 149.99972 * 18 17 16 21 21 C 1.35000 * 107.13988 * 180.02562 * 17 16 15 22 22 N 1.33584 * 108.66067 * 359.97438 * 21 17 16 23 23 C 1.32409 * 109.22304 * 0.02562 * 22 21 17 24 24 C 1.41250 * 132.11894 * 180.02562 * 23 22 21 25 25 Br 1.89095 * 120.25322 * 359.97149 * 24 23 22 26 26 C 1.35705 * 119.49066 * 179.97438 * 24 23 22 27 27 C 1.52997 * 109.46767 * 60.00021 * 9 8 7 28 28 C 1.52992 * 109.47588 * 300.00181 * 27 9 8 29 29 H 1.08999 * 109.46845 * 300.00194 * 1 2 3 30 30 H 1.08990 * 109.46942 * 59.99891 * 1 2 3 31 31 H 1.08999 * 109.47267 * 180.02562 * 1 2 3 32 32 H 1.08998 * 109.47222 * 300.00280 * 7 5 3 33 33 H 1.08998 * 109.46947 * 60.00839 * 7 5 3 34 34 H 1.09001 * 109.46685 * 180.02562 * 8 7 5 35 35 H 1.09002 * 109.47405 * 60.00496 * 8 7 5 36 36 H 0.97005 * 120.00020 * 264.99821 * 11 9 8 37 37 H 1.08004 * 119.74767 * 0.02562 * 15 14 12 38 38 H 1.09006 * 109.47182 * 269.99874 * 18 17 16 39 39 H 0.96708 * 113.99794 * 59.99624 * 19 18 17 40 40 H 1.48501 * 110.00302 * 179.97438 * 20 18 17 41 41 H 1.48501 * 110.00010 * 301.31795 * 20 18 17 42 42 H 1.08005 * 125.66311 * 180.26698 * 21 17 16 43 43 H 1.08002 * 120.23351 * 180.02562 * 26 24 23 44 44 H 1.08996 * 109.47138 * 60.00530 * 27 9 8 45 45 H 1.08999 * 109.47214 * 179.97438 * 27 9 8 46 46 H 1.08999 * 109.47606 * 180.02562 * 28 27 9 47 47 H 1.09002 * 109.47072 * 299.99874 * 28 27 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1959 0.0000 4 8 1.4034 2.2093 0.0005 5 6 3.5664 1.2749 -0.0006 6 1 3.9564 0.7805 0.8891 7 6 4.1129 0.5815 -1.2501 8 6 5.6408 0.6611 -1.2504 9 6 6.0752 2.1281 -1.2500 10 1 5.6854 2.6227 -2.1398 11 7 7.5381 2.2043 -1.2509 12 6 8.2157 2.1383 -2.4141 13 8 7.6127 2.0151 -3.4628 14 6 9.6894 2.2155 -2.4150 15 6 10.3759 2.1482 -3.5929 16 7 11.7334 2.2189 -3.6055 17 6 12.6515 2.1776 -4.6216 18 6 12.3533 2.0324 -6.0916 19 8 11.0818 2.6173 -6.3799 20 14 13.6735 2.8974 -7.0814 21 6 13.8733 2.2914 -4.0588 22 7 13.7258 2.4008 -2.7356 23 6 12.4368 2.3593 -2.4357 24 6 11.7477 2.4324 -1.2049 25 35 12.7062 2.6263 0.4136 26 6 10.3925 2.3623 -1.1928 27 6 5.5286 2.8214 -0.0005 28 6 4.0007 2.7418 -0.0001 29 1 -0.3633 0.5139 0.8900 30 1 -0.3633 0.5138 -0.8899 31 1 -0.3634 -1.0276 0.0005 32 1 3.8038 -0.4638 -1.2502 33 1 3.7229 1.0758 -2.1399 34 1 6.0301 0.1675 -2.1409 35 1 6.0306 0.1665 -0.3607 36 1 8.0192 2.3022 -0.4143 37 1 9.8364 2.0388 -4.5221 38 1 12.3351 0.9751 -6.3560 39 1 11.0253 3.5594 -6.1689 40 1 13.3913 2.7611 -8.5330 41 1 13.7299 4.3334 -6.7072 42 1 14.8134 2.2980 -4.5904 43 1 9.8534 2.4174 -0.2585 44 1 5.9183 2.3269 0.8892 45 1 5.8383 3.8665 0.0001 46 1 3.6113 3.2362 0.8899 47 1 3.6109 3.2364 -0.8898 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_14475160_12335884.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:29:02 Heat of formation + Delta-G solvation = -57.062515 kcal Electronic energy + Delta-G solvation = -34029.202701 eV Core-core repulsion = 29226.285605 eV Total energy + Delta-G solvation = -4802.917096 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 438.067 amu Computer time = 1.14 seconds Orbital eigenvalues (eV) -44.25890 -41.87978 -41.26821 -39.31325 -38.46001 -38.06487 -37.54291 -35.69742 -35.13610 -32.81494 -31.91454 -31.85346 -30.98451 -30.23383 -28.57079 -26.90887 -25.98448 -24.33386 -24.08770 -23.81779 -22.57637 -22.07610 -21.70018 -20.90015 -19.54044 -18.83694 -18.59430 -18.25817 -17.86750 -17.77982 -17.54592 -17.45341 -17.06906 -16.29264 -16.27792 -16.03242 -15.89667 -15.65742 -15.19763 -15.16696 -14.95383 -14.89262 -14.66245 -14.25864 -14.11539 -13.98584 -13.72956 -13.45990 -13.34684 -13.29066 -13.04659 -12.99302 -12.77194 -12.69989 -12.38979 -12.18378 -12.16207 -11.86029 -11.58581 -11.57049 -11.48223 -11.41338 -11.37519 -11.29819 -11.17880 -11.06579 -10.26139 -10.00345 -9.08353 -4.94843 -0.90731 -0.37517 0.19871 0.96292 1.09403 1.13739 1.40690 1.66481 1.70790 1.81443 1.91131 2.01333 2.23056 2.82344 2.98371 3.13851 3.36110 3.44279 3.47313 3.49626 3.58474 3.69026 3.85607 3.92356 4.07398 4.15435 4.18870 4.26657 4.27482 4.30460 4.30831 4.33470 4.38555 4.44038 4.44576 4.49560 4.61587 4.67734 4.79125 4.93074 4.96573 5.06308 5.09631 5.11787 5.23777 5.26324 5.32662 5.35166 5.43455 5.56831 6.17289 6.32682 6.49961 6.64950 6.98887 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.363 6.363 3 C 0.461 3.539 4 O -0.541 6.541 5 C -0.075 4.075 6 H 0.139 0.861 7 C -0.103 4.103 8 C -0.122 4.122 9 C 0.143 3.857 10 H 0.071 0.929 11 N -0.700 5.700 12 C 0.579 3.421 13 O -0.565 6.565 14 C -0.167 4.167 15 C 0.155 3.845 16 N -0.359 5.359 17 C -0.090 4.090 18 C -0.053 4.053 19 O -0.547 6.547 20 Si 0.816 3.184 21 C 0.045 3.955 22 N -0.493 5.493 23 C 0.224 3.776 24 C -0.080 4.080 25 Br 0.007 6.993 26 C -0.025 4.025 27 C -0.116 4.116 28 C -0.099 4.099 29 H 0.061 0.939 30 H 0.058 0.942 31 H 0.128 0.872 32 H 0.087 0.913 33 H 0.057 0.943 34 H 0.059 0.941 35 H 0.093 0.907 36 H 0.417 0.583 37 H 0.189 0.811 38 H 0.139 0.861 39 H 0.386 0.614 40 H -0.290 1.290 41 H -0.290 1.290 42 H 0.228 0.772 43 H 0.188 0.812 44 H 0.102 0.898 45 H 0.086 0.914 46 H 0.079 0.921 47 H 0.058 0.942 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.640 -2.683 2.935 4.302 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.279 6.279 3 C 0.305 3.695 4 O -0.431 6.431 5 C -0.094 4.094 6 H 0.156 0.844 7 C -0.141 4.141 8 C -0.160 4.160 9 C 0.039 3.961 10 H 0.089 0.911 11 N -0.352 5.352 12 C 0.365 3.635 13 O -0.445 6.445 14 C -0.175 4.175 15 C 0.028 3.972 16 N -0.032 5.032 17 C -0.201 4.201 18 C -0.161 4.161 19 O -0.355 6.355 20 Si 0.718 3.282 21 C -0.104 4.104 22 N -0.212 5.212 23 C -0.021 4.021 24 C -0.162 4.162 25 Br 0.092 6.908 26 C -0.050 4.050 27 C -0.153 4.153 28 C -0.137 4.137 29 H 0.080 0.920 30 H 0.077 0.923 31 H 0.147 0.853 32 H 0.105 0.895 33 H 0.076 0.924 34 H 0.077 0.923 35 H 0.112 0.888 36 H 0.256 0.744 37 H 0.205 0.795 38 H 0.156 0.844 39 H 0.235 0.765 40 H -0.217 1.217 41 H -0.217 1.217 42 H 0.244 0.756 43 H 0.205 0.795 44 H 0.120 0.880 45 H 0.104 0.896 46 H 0.098 0.902 47 H 0.077 0.923 Dipole moment (debyes) X Y Z Total from point charges 2.060 -2.315 2.549 4.013 hybrid contribution -2.156 0.716 -0.500 2.326 sum -0.096 -1.599 2.050 2.601 Atomic orbital electron populations 1.23506 0.75214 1.05563 1.02330 1.86507 1.24609 1.33217 1.83556 1.24433 0.93153 0.80949 0.70932 1.90676 1.68205 1.37474 1.46742 1.21272 0.84903 0.99915 1.03308 0.84369 1.21432 0.95607 1.01653 0.95442 1.21868 0.94519 0.96017 1.03620 1.21112 0.78252 0.96650 1.00104 0.91067 1.45750 1.07645 1.73152 1.08632 1.17563 0.85527 0.76121 0.84309 1.90855 1.70073 1.51004 1.32593 1.19274 0.94250 1.11465 0.92507 1.22208 0.80886 0.92411 1.01685 1.42743 1.05895 1.45918 1.08670 1.22398 0.88932 1.17019 0.91767 1.25198 0.94781 1.06408 0.89669 1.86595 1.32203 1.29367 1.87296 0.93465 0.82042 0.77844 0.74895 1.23023 0.98097 1.00028 0.89249 1.70843 1.12786 1.21793 1.15769 1.20753 0.88383 1.06049 0.86957 1.20593 0.94224 1.11014 0.90392 1.96844 1.75658 1.96312 1.21975 1.21376 0.91078 0.93480 0.99092 1.21766 0.93970 1.02274 0.97325 1.21357 0.95673 0.93154 1.03562 0.91997 0.92348 0.85343 0.89473 0.92412 0.92269 0.88824 0.74421 0.79451 0.84397 0.76466 1.21673 1.21681 0.75566 0.79498 0.87991 0.89576 0.90239 0.92331 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 10.56 113.37 1.20 1.17 16 2 O -0.36 -0.77 10.47 -51.37 -0.54 -1.31 16 3 C 0.46 1.48 7.26 71.24 0.52 1.99 16 4 O -0.54 -5.40 15.73 21.95 0.35 -5.06 16 5 C -0.08 0.30 2.63 -11.54 -0.03 0.27 16 6 H 0.14 -1.24 8.14 -2.39 -0.02 -1.26 16 7 C -0.10 0.40 5.14 30.59 0.16 0.56 16 8 C -0.12 0.63 5.49 30.60 0.17 0.80 16 9 C 0.14 -0.72 2.45 44.99 0.11 -0.61 16 10 H 0.07 0.04 7.58 -2.39 -0.02 0.02 16 11 N -0.70 4.38 5.03 -445.66 -2.24 2.14 16 12 C 0.58 0.25 7.73 86.71 0.67 0.92 16 13 O -0.57 -4.83 15.94 -4.01 -0.06 -4.89 16 14 C -0.17 0.13 5.84 -20.35 -0.12 0.01 16 15 C 0.15 0.29 9.91 83.65 0.83 1.11 16 16 N -0.36 -1.11 2.93 -337.72 -0.99 -2.10 16 17 C -0.09 -0.03 6.24 41.00 0.26 0.22 16 18 C -0.05 0.17 3.06 71.23 0.22 0.38 16 19 O -0.55 -0.02 10.90 -148.98 -1.62 -1.65 16 20 Si 0.82 -4.40 31.18 68.60 2.14 -2.26 16 21 C 0.05 0.02 10.44 83.68 0.87 0.89 16 22 N -0.49 -3.27 11.30 -194.10 -2.19 -5.46 16 23 C 0.22 1.20 7.59 134.18 1.02 2.21 16 24 C -0.08 -0.13 6.24 22.42 0.14 0.01 16 25 Br 0.01 0.01 33.72 -20.37 -0.69 -0.68 16 26 C -0.02 0.09 9.26 22.55 0.21 0.30 16 27 C -0.12 1.04 5.39 30.59 0.16 1.20 16 28 C -0.10 0.41 4.49 30.59 0.14 0.55 16 29 H 0.06 -0.04 8.13 -2.39 -0.02 -0.06 16 30 H 0.06 0.00 8.13 -2.39 -0.02 -0.02 16 31 H 0.13 -0.86 8.14 -2.39 -0.02 -0.88 16 32 H 0.09 -0.37 8.11 -2.39 -0.02 -0.39 16 33 H 0.06 -0.04 8.14 -2.39 -0.02 -0.06 16 34 H 0.06 -0.04 8.14 -2.39 -0.02 -0.06 16 35 H 0.09 -0.85 8.14 -2.39 -0.02 -0.87 16 36 H 0.42 -5.30 6.64 -92.70 -0.62 -5.92 16 37 H 0.19 0.49 6.19 -2.91 -0.02 0.48 16 38 H 0.14 -0.75 7.96 -2.38 -0.02 -0.77 16 39 H 0.39 -1.59 8.70 -74.05 -0.64 -2.24 16 40 H -0.29 -0.45 7.11 99.48 0.71 0.26 16 41 H -0.29 -0.17 7.11 99.48 0.71 0.54 16 42 H 0.23 -1.86 6.89 -2.91 -0.02 -1.88 16 43 H 0.19 -2.16 6.44 -2.91 -0.02 -2.18 16 44 H 0.10 -1.39 8.14 -2.39 -0.02 -1.41 16 45 H 0.09 -0.81 8.14 -2.39 -0.02 -0.83 16 46 H 0.08 -0.26 8.10 -2.39 -0.02 -0.28 16 47 H 0.06 0.00 8.10 -2.39 -0.02 -0.02 16 Total: 0.00 -27.57 409.11 0.49 -27.08 By element: Atomic # 1 Polarization: -17.65 SS G_CDS: -0.17 Total: -17.82 kcal Atomic # 6 Polarization: 5.48 SS G_CDS: 6.52 Total: 12.00 kcal Atomic # 7 Polarization: 0.01 SS G_CDS: -5.43 Total: -5.42 kcal Atomic # 8 Polarization: -11.02 SS G_CDS: -1.88 Total: -12.90 kcal Atomic # 14 Polarization: -4.40 SS G_CDS: 2.14 Total: -2.26 kcal Atomic # 35 Polarization: 0.01 SS G_CDS: -0.69 Total: -0.68 kcal Total: -27.57 0.49 -27.08 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_14475160_12335884.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -29.982 kcal (2) G-P(sol) polarization free energy of solvation -27.569 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -57.552 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.489 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -27.080 kcal (6) G-S(sol) free energy of system = (1) + (5) -57.063 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.14 seconds