Wall clock time and date at job start Tue Mar 9 2021 12:52:13 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42902 * 1 3 3 Si 1.86302 * 109.47169 * 2 1 4 4 C 1.50697 * 109.46854 * 119.99756 * 2 1 3 5 5 C 1.35008 * 126.42721 * 210.02256 * 4 2 1 6 6 N 1.33583 * 108.65646 * 179.97438 * 5 4 2 7 7 C 1.32415 * 109.22388 * 359.97438 * 6 5 4 8 8 C 1.41252 * 132.12076 * 179.97438 * 7 6 5 9 9 Br 1.89093 * 120.25649 * 0.02870 * 8 7 6 10 10 C 1.35711 * 119.48812 * 180.02562 * 8 7 6 11 11 C 1.41758 * 119.53231 * 0.26187 * 10 8 7 12 12 C 1.47577 * 120.00759 * 179.72636 * 11 10 8 13 13 O 1.21591 * 119.99812 * 179.97438 * 12 11 10 14 14 N 1.34778 * 119.99894 * 359.97438 * 12 11 10 15 15 C 1.46505 * 119.99651 * 180.02562 * 14 12 11 16 16 H 1.09001 * 112.85131 * 334.67089 * 15 14 12 17 17 C 1.53778 * 113.61580 * 105.86755 * 15 14 12 18 18 C 1.53948 * 87.02163 * 139.94670 * 17 15 14 19 19 H 1.09004 * 113.53503 * 89.19172 * 18 17 15 20 20 C 1.53002 * 113.74371 * 220.05426 * 18 17 15 21 21 N 1.46502 * 109.47094 * 272.59682 * 20 18 17 22 22 C 1.34947 * 126.03182 * 124.99839 * 21 20 18 23 23 C 1.35322 * 107.74614 * 179.97438 * 22 21 20 24 24 C 1.39871 * 107.91453 * 0.02562 * 23 22 21 25 25 N 1.30838 * 108.20515 * 359.73760 * 24 23 22 26 26 C 1.53779 * 87.11314 * 334.63914 * 18 17 15 27 27 C 1.36492 * 119.98333 * 359.45480 * 11 10 8 28 28 N 1.35953 * 120.50417 * 0.56973 * 27 11 10 29 29 H 0.96702 * 113.99987 * 59.99949 * 1 2 3 30 30 H 1.08997 * 109.47061 * 240.00196 * 2 1 3 31 31 H 1.48494 * 110.00146 * 59.99557 * 3 2 1 32 32 H 1.48500 * 110.00087 * 181.32154 * 3 2 1 33 33 H 1.08002 * 125.67046 * 0.02562 * 5 4 2 34 34 H 1.08002 * 120.22936 * 179.97438 * 10 8 7 35 35 H 0.96997 * 120.00113 * 0.02562 * 14 12 11 36 36 H 1.09003 * 113.61422 * 254.52996 * 17 15 14 37 37 H 1.09002 * 113.61433 * 25.42495 * 17 15 14 38 38 H 1.09000 * 109.47051 * 32.59803 * 20 18 17 39 39 H 1.08995 * 109.46990 * 152.59959 * 20 18 17 40 40 H 1.08001 * 126.13174 * 0.02562 * 22 21 20 41 41 H 1.08000 * 126.04338 * 179.97438 * 23 22 21 42 42 H 1.08004 * 125.89267 * 180.02562 * 24 23 22 43 43 H 1.09000 * 113.60855 * 270.80930 * 26 18 17 44 44 H 1.08995 * 113.69206 * 139.92408 * 26 18 17 45 45 H 1.08003 * 119.75362 * 180.23177 * 27 11 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 3.0852 -0.4608 1.8853 6 7 3.1761 -1.2956 2.9243 7 6 2.1063 -2.0753 2.9519 8 6 1.7118 -3.1118 3.8268 9 35 2.8119 -3.5972 5.2861 10 6 0.5370 -3.7564 3.6119 11 6 -0.2732 -3.3837 2.5099 12 6 -1.5497 -4.0818 2.2629 13 8 -2.2447 -3.7617 1.3180 14 7 -1.9451 -5.0741 3.0848 15 6 -3.2121 -5.7675 2.8392 16 1 -3.9283 -5.1579 2.2882 17 6 -3.0383 -7.1835 2.2652 18 6 -4.1922 -7.6129 3.1894 19 1 -5.1768 -7.5090 2.7334 20 6 -3.9816 -8.9799 3.8434 21 7 -4.4883 -10.0293 2.9555 22 6 -3.7911 -11.0936 2.5058 23 6 -4.6136 -11.8214 1.7153 24 6 -5.8558 -11.1794 1.6803 25 7 -5.7834 -10.1079 2.4276 26 6 -3.8044 -6.4310 4.0937 27 6 0.1251 -2.3754 1.6807 28 7 1.3020 -1.7295 1.8953 29 1 -0.3933 0.4417 -0.7651 30 1 1.7923 -0.5138 -0.8900 31 1 1.5615 2.4679 1.2084 32 1 3.5346 1.7703 -0.0322 33 1 3.8134 0.2896 1.6147 34 1 0.2239 -4.5509 4.2730 35 1 -1.3908 -5.3292 3.8388 36 1 -3.2770 -7.2569 1.2042 37 1 -2.0826 -7.6427 2.5178 38 1 -2.9179 -9.1373 4.0220 39 1 -4.5184 -9.0157 4.7914 40 1 -2.7613 -11.3239 2.7362 41 1 -4.3562 -12.7358 1.2015 42 1 -6.7260 -11.5134 1.1346 43 1 -3.0586 -6.6842 4.8471 44 1 -4.6598 -5.8971 4.5075 45 1 -0.4969 -2.0919 0.8444 There are 67 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 67 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_14688084_12335884.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:52:13 Heat of formation + Delta-G solvation = 147.068470 kcal Electronic energy + Delta-G solvation = -32073.958058 eV Core-core repulsion = 27529.953027 eV Total energy + Delta-G solvation = -4544.005031 eV No. of doubly occupied orbitals = 67 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 432.058 amu Computer time = 1.07 seconds Orbital eigenvalues (eV) -44.37769 -42.05889 -41.44601 -39.82542 -38.44595 -37.91577 -35.66846 -35.12200 -33.67605 -32.52321 -31.97563 -30.96171 -30.34105 -28.57292 -26.93880 -26.75593 -26.02515 -24.20213 -23.88817 -22.56886 -22.03453 -21.95730 -21.53798 -20.53819 -19.24607 -18.79758 -18.62112 -18.21057 -17.95878 -17.50276 -17.32878 -16.47648 -16.34106 -16.23775 -16.11306 -15.84017 -15.57955 -15.55393 -15.29493 -14.98704 -14.68123 -14.50104 -14.23287 -14.19512 -13.66490 -13.48482 -13.44264 -13.40466 -13.28180 -13.15871 -12.86654 -12.84446 -12.34682 -12.11309 -11.87273 -11.69956 -11.55741 -11.54469 -11.45507 -11.42454 -11.28865 -10.78716 -10.33520 -10.26649 -10.07503 -9.46030 -9.16143 -5.01725 -0.98058 -0.46304 0.11418 0.88085 1.02131 1.06086 1.37686 1.61729 1.66342 1.69129 1.92742 1.96979 2.00115 2.15109 2.67043 2.95300 3.11803 3.29818 3.33777 3.38168 3.48436 3.50123 3.55327 3.74626 3.81307 3.93589 3.98330 4.10447 4.19742 4.23481 4.27150 4.33368 4.38625 4.43398 4.52768 4.61639 4.69139 4.77067 4.82158 4.87315 4.91904 4.96370 5.03467 5.07983 5.14798 5.17996 5.45417 5.49294 5.76787 6.21371 6.28644 6.30644 6.71722 6.80048 6.94351 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.570 6.570 2 C -0.052 4.052 3 Si 0.821 3.179 4 C -0.045 4.045 5 C 0.017 3.983 6 N -0.494 5.494 7 C 0.224 3.776 8 C -0.085 4.085 9 Br 0.009 6.991 10 C -0.017 4.017 11 C -0.173 4.173 12 C 0.580 3.420 13 O -0.566 6.566 14 N -0.693 5.693 15 C 0.120 3.880 16 H 0.095 0.905 17 C -0.141 4.141 18 C -0.116 4.116 19 H 0.081 0.919 20 C 0.139 3.861 21 N -0.374 5.374 22 C 0.054 3.946 23 C -0.295 4.295 24 C 0.028 3.972 25 N -0.338 5.338 26 C -0.118 4.118 27 C 0.168 3.832 28 N -0.358 5.358 29 H 0.415 0.585 30 H 0.109 0.891 31 H -0.309 1.309 32 H -0.271 1.271 33 H 0.201 0.799 34 H 0.193 0.807 35 H 0.418 0.582 36 H 0.049 0.951 37 H 0.108 0.892 38 H 0.131 0.869 39 H 0.093 0.907 40 H 0.206 0.794 41 H 0.159 0.841 42 H 0.194 0.806 43 H 0.124 0.876 44 H 0.084 0.916 45 H 0.194 0.806 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.624 -1.532 -1.231 2.062 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.382 6.382 2 C -0.160 4.160 3 Si 0.724 3.276 4 C -0.157 4.157 5 C -0.132 4.132 6 N -0.213 5.213 7 C -0.021 4.021 8 C -0.167 4.167 9 Br 0.095 6.905 10 C -0.043 4.043 11 C -0.180 4.180 12 C 0.366 3.634 13 O -0.446 6.446 14 N -0.344 5.344 15 C 0.016 3.984 16 H 0.113 0.887 17 C -0.179 4.179 18 C -0.136 4.136 19 H 0.100 0.900 20 C 0.019 3.981 21 N -0.157 5.157 22 C -0.092 4.092 23 C -0.324 4.324 24 C -0.157 4.157 25 N -0.160 5.160 26 C -0.156 4.156 27 C 0.042 3.958 28 N -0.031 5.031 29 H 0.269 0.731 30 H 0.127 0.873 31 H -0.237 1.237 32 H -0.197 1.197 33 H 0.218 0.782 34 H 0.210 0.790 35 H 0.257 0.743 36 H 0.068 0.932 37 H 0.126 0.874 38 H 0.149 0.851 39 H 0.111 0.889 40 H 0.223 0.777 41 H 0.177 0.823 42 H 0.211 0.789 43 H 0.142 0.858 44 H 0.103 0.897 45 H 0.210 0.790 Dipole moment (debyes) X Y Z Total from point charges 1.216 -0.049 0.667 1.388 hybrid contribution -0.228 -1.108 -0.845 1.412 sum 0.988 -1.157 -0.179 1.532 Atomic orbital electron populations 1.86326 1.16815 1.82733 1.52341 1.24723 0.86269 1.11456 0.93596 0.94090 0.77929 0.71278 0.84338 1.21674 0.96766 0.95334 1.01879 1.22665 0.97267 1.00748 0.92541 1.70781 1.20557 1.08165 1.21824 1.20804 0.89842 1.00013 0.91454 1.20586 0.98799 0.99302 0.98035 1.96830 1.66751 1.90380 1.36584 1.21418 0.89743 0.97844 0.95251 1.19321 0.98613 1.00926 0.99174 1.17551 0.83793 0.79735 0.82274 1.90843 1.55920 1.66528 1.31286 1.45677 1.23221 1.34867 1.30647 1.22511 0.85197 0.91683 0.99034 0.88664 1.23587 0.99496 0.95674 0.99186 1.22556 0.99325 0.93555 0.98135 0.90025 1.22038 1.01453 0.83399 0.91231 1.48969 1.07981 1.20395 1.38331 1.23171 1.00164 0.88690 0.97214 1.21867 0.94371 1.06090 1.10114 1.24300 1.00079 0.93083 0.98272 1.77263 0.99467 1.22500 1.16804 1.23337 1.02160 0.94216 0.95932 1.22293 0.84649 0.89666 0.99236 1.42724 1.15168 1.24164 1.20999 0.73142 0.87305 1.23704 1.19694 0.78231 0.79006 0.74258 0.93234 0.87394 0.85132 0.88915 0.77682 0.82346 0.78936 0.85823 0.89706 0.78963 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.57 1.76 10.88 -148.98 -1.62 0.14 16 2 C -0.05 0.15 3.05 71.23 0.22 0.36 16 3 Si 0.82 -4.12 31.28 68.60 2.15 -1.98 16 4 C -0.05 -0.25 6.28 41.01 0.26 0.00 16 5 C 0.02 0.13 10.44 83.68 0.87 1.00 16 6 N -0.49 -5.96 11.30 -194.10 -2.19 -8.16 16 7 C 0.22 2.09 7.59 134.18 1.02 3.11 16 8 C -0.08 -0.34 6.24 22.42 0.14 -0.20 16 9 Br 0.01 0.03 33.72 -20.37 -0.69 -0.66 16 10 C -0.02 0.04 9.26 22.55 0.21 0.25 16 11 C -0.17 -0.17 5.84 -20.35 -0.12 -0.29 16 12 C 0.58 0.95 7.76 86.71 0.67 1.62 16 13 O -0.57 -5.53 15.89 -4.00 -0.06 -5.59 16 14 N -0.69 3.94 5.31 -443.14 -2.35 1.58 16 15 C 0.12 -0.52 4.21 45.52 0.19 -0.33 16 16 H 0.10 0.13 7.50 -2.39 -0.02 0.11 16 17 C -0.14 0.65 7.45 31.18 0.23 0.88 16 18 C -0.12 0.60 3.86 -10.21 -0.04 0.57 16 19 H 0.08 0.09 7.97 -2.39 -0.02 0.08 16 20 C 0.14 -0.92 6.35 86.38 0.55 -0.37 16 21 N -0.37 -0.35 3.68 -348.05 -1.28 -1.63 16 22 C 0.05 -0.08 11.45 83.54 0.96 0.88 16 23 C -0.30 -0.43 10.80 21.99 0.24 -0.20 16 24 C 0.03 0.13 12.03 85.24 1.02 1.15 16 25 N -0.34 -2.49 12.28 -57.02 -0.70 -3.19 16 26 C -0.12 1.13 7.39 31.12 0.23 1.36 16 27 C 0.17 0.76 9.91 83.65 0.83 1.59 16 28 N -0.36 -2.60 2.93 -337.71 -0.99 -3.59 16 29 H 0.41 -5.73 8.74 -74.06 -0.65 -6.37 16 30 H 0.11 -0.81 7.96 -2.39 -0.02 -0.83 16 31 H -0.31 -1.50 7.11 99.48 0.71 -0.80 16 32 H -0.27 0.42 6.91 99.48 0.69 1.11 16 33 H 0.20 0.60 6.77 -2.91 -0.02 0.58 16 34 H 0.19 -2.14 6.44 -2.91 -0.02 -2.15 16 35 H 0.42 -5.32 6.74 -92.71 -0.63 -5.94 16 36 H 0.05 0.06 8.14 -2.39 -0.02 0.04 16 37 H 0.11 -0.94 7.91 -2.39 -0.02 -0.96 16 38 H 0.13 -1.76 7.79 -2.39 -0.02 -1.78 16 39 H 0.09 -0.67 8.14 -2.39 -0.02 -0.69 16 40 H 0.21 -1.96 8.06 -2.91 -0.02 -1.99 16 41 H 0.16 -0.34 8.06 -2.91 -0.02 -0.37 16 42 H 0.19 -0.01 8.06 -2.91 -0.02 -0.04 16 43 H 0.12 -1.92 8.07 -2.39 -0.02 -1.94 16 44 H 0.08 -0.72 8.14 -2.39 -0.02 -0.74 16 45 H 0.19 0.85 6.19 -2.91 -0.02 0.83 16 Total: 0.00 -33.10 401.87 -0.44 -33.54 By element: Atomic # 1 Polarization: -21.68 SS G_CDS: -0.18 Total: -21.86 kcal Atomic # 6 Polarization: 3.91 SS G_CDS: 7.48 Total: 11.39 kcal Atomic # 7 Polarization: -7.47 SS G_CDS: -7.52 Total: -14.98 kcal Atomic # 8 Polarization: -3.77 SS G_CDS: -1.68 Total: -5.45 kcal Atomic # 14 Polarization: -4.12 SS G_CDS: 2.15 Total: -1.98 kcal Atomic # 35 Polarization: 0.03 SS G_CDS: -0.69 Total: -0.66 kcal Total: -33.10 -0.44 -33.54 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_14688084_12335884.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 180.608 kcal (2) G-P(sol) polarization free energy of solvation -33.100 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 147.508 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.440 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.540 kcal (6) G-S(sol) free energy of system = (1) + (5) 147.068 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.07 seconds