Wall clock time and date at job start Tue Mar 9 2021 13:00:25 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42904 * 1 3 3 Si 1.86305 * 109.47000 * 2 1 4 4 C 1.50697 * 109.47016 * 119.99957 * 2 1 3 5 5 C 1.38247 * 119.94054 * 245.02198 * 4 2 1 6 6 C 1.38188 * 120.06939 * 179.74560 * 5 4 2 7 7 C 1.38680 * 119.95380 * 0.52829 * 6 5 4 8 8 O 1.35919 * 120.05882 * 179.71856 * 7 6 5 9 9 C 1.42902 * 116.99782 * 359.73188 * 8 7 6 10 10 C 1.50703 * 109.46962 * 179.97438 * 9 8 7 11 11 O 1.21284 * 119.99942 * 359.97438 * 10 9 8 12 12 N 1.34773 * 119.99837 * 180.02562 * 10 9 8 13 13 C 1.46499 * 120.00031 * 179.97438 * 12 10 9 14 14 C 1.52997 * 109.47695 * 204.99801 * 13 12 10 15 15 C 1.52997 * 109.47457 * 179.97438 * 14 13 12 16 16 C 1.53002 * 109.46817 * 60.00169 * 15 14 13 17 17 C 1.52996 * 109.47346 * 299.99737 * 16 15 14 18 18 C 1.53002 * 109.46891 * 59.99997 * 17 16 15 19 19 C 1.52997 * 109.46978 * 60.00410 * 18 17 16 20 20 C 1.53006 * 109.47164 * 299.99874 * 19 18 17 21 21 O 1.42895 * 109.47000 * 180.02562 * 20 19 18 22 22 C 1.52997 * 109.47127 * 59.99836 * 20 19 18 23 23 C 1.52999 * 109.46623 * 299.99900 * 20 19 18 24 24 C 1.38831 * 119.88182 * 359.45381 * 7 6 5 25 25 Br 1.89101 * 120.03688 * 180.29487 * 24 7 6 26 26 C 1.38192 * 119.92701 * 0.27048 * 24 7 6 27 27 H 0.96704 * 114.00049 * 299.99900 * 1 2 3 28 28 H 1.08995 * 109.47191 * 239.99761 * 2 1 3 29 29 H 1.48500 * 109.99641 * 178.67953 * 3 2 1 30 30 H 1.48498 * 110.00008 * 299.99864 * 3 2 1 31 31 H 1.07994 * 119.96316 * 0.02562 * 5 4 2 32 32 H 1.08001 * 120.02135 * 180.25484 * 6 5 4 33 33 H 1.09002 * 109.47135 * 59.99897 * 9 8 7 34 34 H 1.08995 * 109.47240 * 299.99904 * 9 8 7 35 35 H 0.96998 * 120.00452 * 359.97438 * 12 10 9 36 36 H 1.09004 * 109.47041 * 324.99924 * 13 12 10 37 37 H 1.09001 * 109.46989 * 59.99548 * 14 13 12 38 38 H 1.08993 * 109.47194 * 299.99651 * 15 14 13 39 39 H 1.09002 * 109.46695 * 179.97438 * 15 14 13 40 40 H 1.09004 * 109.46733 * 179.97438 * 16 15 14 41 41 H 1.08992 * 109.47554 * 180.02562 * 17 16 15 42 42 H 1.09004 * 109.47108 * 300.00289 * 17 16 15 43 43 H 1.09002 * 109.47097 * 180.02562 * 18 17 16 44 44 H 1.09000 * 109.47140 * 179.97438 * 19 18 17 45 45 H 1.09001 * 109.47375 * 59.99908 * 19 18 17 46 46 H 0.96696 * 114.00485 * 299.99339 * 21 20 19 47 47 H 1.09002 * 109.47153 * 180.02562 * 22 20 19 48 48 H 1.09001 * 109.46832 * 60.00321 * 22 20 19 49 49 H 1.09000 * 109.47486 * 299.99829 * 23 20 19 50 50 H 1.09002 * 109.46716 * 179.97438 * 23 20 19 51 51 H 1.08005 * 119.97597 * 180.02562 * 26 24 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 2.6383 -0.0109 2.1908 6 6 3.0956 -0.6585 3.3226 7 6 2.8544 -2.0139 3.4899 8 8 3.3082 -2.6542 4.5996 9 6 4.0317 -1.8704 5.5506 10 6 4.4513 -2.7431 6.7054 11 8 4.1592 -3.9202 6.7134 12 7 5.1504 -2.2152 7.7296 13 6 5.5578 -3.0634 8.8525 14 6 5.7518 -2.1995 10.1002 15 6 6.1767 -3.0854 11.2730 16 6 7.4915 -3.7889 10.9304 17 6 7.2976 -4.6529 9.6828 18 6 6.8726 -3.7670 8.5100 19 6 7.9563 -2.7207 8.2423 20 6 8.1503 -1.8566 9.4901 21 8 9.1620 -0.8790 9.2399 22 6 8.5752 -2.7425 10.6629 23 6 6.8355 -1.1531 9.8325 24 6 2.1440 -2.7144 2.5245 25 35 1.8055 -4.5609 2.7522 26 6 1.6840 -2.0606 1.3972 27 1 -0.3933 0.4417 0.7651 28 1 1.7924 -0.5138 -0.8899 29 1 3.5346 1.7703 0.0322 30 1 1.5615 2.4679 -1.2085 31 1 2.8294 1.0437 2.0584 32 1 3.6442 -0.1104 4.0743 33 1 3.3952 -1.0649 5.9169 34 1 4.9160 -1.4469 5.0747 35 1 5.3837 -1.2738 7.7234 36 1 4.7861 -3.8091 9.0433 37 1 4.8150 -1.6985 10.3445 38 1 5.4047 -3.8307 11.4637 39 1 6.3153 -2.4697 12.1618 40 1 7.7945 -4.4197 11.7662 41 1 8.2341 -5.1544 9.4390 42 1 6.5255 -5.3984 9.8734 43 1 6.7340 -4.3826 7.6212 44 1 7.6537 -2.0898 7.4066 45 1 8.8930 -3.2219 7.9983 46 1 10.0246 -1.2541 9.0158 47 1 8.7129 -2.1271 11.5519 48 1 9.5119 -3.2437 10.4188 49 1 6.5327 -0.5219 8.9970 50 1 6.9735 -0.5379 10.7217 51 1 1.1309 -2.6047 0.6459 There are 70 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 70 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_15142604_6201210.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:00:25 Heat of formation + Delta-G solvation = -126.081625 kcal Electronic energy + Delta-G solvation = -35324.521023 eV Core-core repulsion = 30622.151377 eV Total energy + Delta-G solvation = -4702.369646 eV No. of doubly occupied orbitals = 70 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 438.092 amu Computer time = 1.26 seconds Orbital eigenvalues (eV) -42.86976 -41.61355 -40.41205 -39.08496 -37.48133 -37.19807 -35.78396 -33.75891 -33.63270 -32.63625 -31.94879 -31.62556 -30.49268 -29.50542 -26.98489 -26.69820 -26.12190 -24.05924 -22.96337 -22.65014 -22.33885 -22.27431 -21.21964 -19.58367 -19.13809 -18.37200 -18.16541 -17.77979 -17.51564 -17.14186 -16.87676 -16.39853 -16.00675 -15.89023 -15.85897 -15.69982 -15.44557 -15.24456 -15.19511 -14.84957 -14.72867 -14.61155 -14.44011 -14.28335 -13.87410 -13.84158 -13.71064 -13.64480 -13.52806 -13.34653 -13.02396 -12.36696 -12.25183 -12.14797 -12.12808 -12.04922 -11.93210 -11.91353 -11.90171 -11.85012 -11.59029 -11.24849 -11.24525 -10.98616 -10.78994 -10.44667 -10.42778 -10.07875 -9.98835 -9.33642 -4.98281 -0.06704 0.10590 0.62648 1.33402 1.40134 1.45713 1.66811 2.01803 2.38461 2.48905 3.12105 3.38733 3.44260 3.48295 3.51015 3.65715 3.74582 3.79646 3.82291 3.88633 3.96886 4.01071 4.04467 4.10547 4.11239 4.15027 4.17524 4.22511 4.26395 4.31009 4.32100 4.50231 4.57036 4.62734 4.65867 4.67996 4.70442 4.83507 4.93620 4.97839 4.99063 4.99534 5.02295 5.05207 5.10640 5.16147 5.22403 5.28159 5.32445 5.40312 5.44861 5.47016 5.49182 6.04900 6.42830 6.79420 6.84539 7.12340 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.558 6.558 2 C -0.076 4.076 3 Si 0.788 3.212 4 C -0.153 4.153 5 C -0.052 4.052 6 C -0.190 4.190 7 C 0.149 3.851 8 O -0.304 6.304 9 C 0.032 3.968 10 C 0.513 3.487 11 O -0.565 6.565 12 N -0.705 5.705 13 C 0.159 3.841 14 C -0.081 4.081 15 C -0.110 4.110 16 C -0.084 4.084 17 C -0.109 4.109 18 C -0.091 4.091 19 C -0.130 4.130 20 C 0.137 3.863 21 O -0.575 6.575 22 C -0.136 4.136 23 C -0.099 4.099 24 C -0.145 4.145 25 Br -0.055 7.055 26 C -0.036 4.036 27 H 0.396 0.604 28 H 0.104 0.896 29 H -0.277 1.277 30 H -0.304 1.304 31 H 0.168 0.832 32 H 0.180 0.820 33 H 0.134 0.866 34 H 0.127 0.873 35 H 0.416 0.584 36 H 0.071 0.929 37 H 0.097 0.903 38 H 0.069 0.931 39 H 0.081 0.919 40 H 0.081 0.919 41 H 0.068 0.932 42 H 0.062 0.938 43 H 0.053 0.947 44 H 0.069 0.931 45 H 0.066 0.934 46 H 0.389 0.611 47 H 0.071 0.929 48 H 0.068 0.932 49 H 0.077 0.923 50 H 0.076 0.924 51 H 0.135 0.865 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.163 8.653 5.197 10.578 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.366 6.366 2 C -0.185 4.185 3 Si 0.693 3.307 4 C -0.154 4.154 5 C -0.070 4.070 6 C -0.209 4.209 7 C 0.101 3.899 8 O -0.217 6.217 9 C -0.046 4.046 10 C 0.299 3.701 11 O -0.443 6.443 12 N -0.359 5.359 13 C 0.055 3.945 14 C -0.100 4.100 15 C -0.148 4.148 16 C -0.102 4.102 17 C -0.147 4.147 18 C -0.111 4.111 19 C -0.168 4.168 20 C 0.097 3.903 21 O -0.383 6.383 22 C -0.173 4.173 23 C -0.137 4.137 24 C -0.225 4.225 25 Br 0.030 6.970 26 C -0.056 4.056 27 H 0.246 0.754 28 H 0.121 0.879 29 H -0.204 1.204 30 H -0.233 1.233 31 H 0.185 0.815 32 H 0.197 0.803 33 H 0.151 0.849 34 H 0.145 0.855 35 H 0.255 0.745 36 H 0.089 0.911 37 H 0.115 0.885 38 H 0.088 0.912 39 H 0.099 0.901 40 H 0.100 0.900 41 H 0.086 0.914 42 H 0.080 0.920 43 H 0.072 0.928 44 H 0.088 0.912 45 H 0.085 0.915 46 H 0.238 0.762 47 H 0.089 0.911 48 H 0.087 0.913 49 H 0.096 0.904 50 H 0.095 0.905 51 H 0.153 0.847 Dipole moment (debyes) X Y Z Total from point charges 2.875 7.584 4.525 9.287 hybrid contribution 0.709 -0.876 -0.693 1.324 sum 3.584 6.707 3.831 8.516 Atomic orbital electron populations 1.86492 1.17338 1.82240 1.50514 1.25274 0.85294 1.11346 0.96546 0.93801 0.77801 0.74049 0.85023 1.20376 1.02610 0.93702 0.98749 1.21255 0.93534 1.00642 0.91551 1.21576 1.06006 0.91540 1.01740 1.18812 0.93264 0.91773 0.86099 1.86251 1.68605 1.37868 1.28945 1.22861 0.99570 0.93830 0.88339 1.20485 0.77735 0.88038 0.83838 1.90788 1.55819 1.18581 1.79106 1.45810 1.55665 1.14193 1.20225 1.20906 0.95525 0.92697 0.85413 1.21290 0.99483 0.95703 0.93542 1.21588 0.96911 0.98918 0.97420 1.21055 0.95242 0.96296 0.97623 1.21553 1.01651 0.97358 0.94188 1.21324 0.94744 0.96565 0.98440 1.22123 0.98921 0.97411 0.98316 1.21069 0.88681 0.87609 0.92979 1.86507 1.23133 1.36315 1.92314 1.22183 0.98698 0.97519 0.98925 1.21455 0.92094 0.97251 1.02894 1.21278 1.09811 0.91906 0.99503 1.96758 1.94951 1.07555 1.97718 1.20880 0.95798 0.94508 0.94383 0.75392 0.87868 1.20375 1.23270 0.81548 0.80303 0.84888 0.85502 0.74521 0.91052 0.88501 0.91213 0.90055 0.90018 0.91372 0.91967 0.92838 0.91203 0.91508 0.76195 0.91060 0.91320 0.90438 0.90518 0.84699 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 0.41 12.83 -148.98 -1.91 -1.51 16 2 C -0.08 0.17 2.80 71.24 0.20 0.37 16 3 Si 0.79 -4.31 29.80 68.60 2.04 -2.27 16 4 C -0.15 0.24 5.35 -19.85 -0.11 0.14 16 5 C -0.05 0.32 8.66 22.26 0.19 0.51 16 6 C -0.19 1.04 9.04 22.36 0.20 1.24 16 7 C 0.15 0.36 6.68 22.52 0.15 0.51 16 8 O -0.30 -1.46 9.01 -73.60 -0.66 -2.13 16 9 C 0.03 -0.15 5.22 71.24 0.37 0.22 16 10 C 0.51 0.91 7.87 87.66 0.69 1.60 16 11 O -0.57 -7.65 16.16 15.99 0.26 -7.39 16 12 N -0.70 3.10 4.24 -442.53 -1.87 1.23 16 13 C 0.16 -0.28 2.05 44.99 0.09 -0.18 16 14 C -0.08 0.46 2.88 -10.79 -0.03 0.43 16 15 C -0.11 0.56 5.19 30.59 0.16 0.72 16 16 C -0.08 0.34 3.19 -10.79 -0.03 0.31 16 17 C -0.11 0.18 5.19 30.59 0.16 0.34 16 18 C -0.09 0.05 2.88 -10.79 -0.03 0.02 16 19 C -0.13 0.41 4.66 30.60 0.14 0.55 16 20 C 0.14 -0.56 1.15 -10.79 -0.01 -0.57 16 21 O -0.57 1.32 12.98 -148.98 -1.93 -0.61 16 22 C -0.14 0.58 4.82 30.59 0.15 0.73 16 23 C -0.10 0.56 4.67 30.60 0.14 0.70 16 24 C -0.14 -0.87 6.24 22.40 0.14 -0.73 16 25 Br -0.06 -0.55 33.16 -20.37 -0.68 -1.22 16 26 C -0.04 -0.11 9.42 22.27 0.21 0.10 16 27 H 0.40 -3.64 8.70 -74.05 -0.64 -4.28 16 28 H 0.10 -0.03 7.96 -2.39 -0.02 -0.05 16 29 H -0.28 0.51 7.11 99.48 0.71 1.22 16 30 H -0.30 -0.98 7.11 99.48 0.71 -0.28 16 31 H 0.17 -2.08 4.90 -2.91 -0.01 -2.10 16 32 H 0.18 -2.46 6.30 -2.91 -0.02 -2.48 16 33 H 0.13 -1.62 7.65 -2.39 -0.02 -1.63 16 34 H 0.13 -1.42 7.67 -2.39 -0.02 -1.43 16 35 H 0.42 -4.46 6.87 -92.71 -0.64 -5.10 16 36 H 0.07 0.25 7.58 -2.38 -0.02 0.23 16 37 H 0.10 -0.71 8.14 -2.39 -0.02 -0.73 16 38 H 0.07 -0.31 8.14 -2.39 -0.02 -0.33 16 39 H 0.08 -0.51 8.14 -2.39 -0.02 -0.53 16 40 H 0.08 -0.37 8.14 -2.39 -0.02 -0.39 16 41 H 0.07 -0.11 8.14 -2.39 -0.02 -0.13 16 42 H 0.06 0.00 8.14 -2.38 -0.02 -0.02 16 43 H 0.05 0.27 8.14 -2.39 -0.02 0.25 16 44 H 0.07 -0.23 7.61 -2.39 -0.02 -0.24 16 45 H 0.07 -0.20 8.14 -2.39 -0.02 -0.22 16 46 H 0.39 -3.12 9.05 -74.06 -0.67 -3.79 16 47 H 0.07 -0.26 8.14 -2.39 -0.02 -0.28 16 48 H 0.07 -0.32 8.14 -2.39 -0.02 -0.34 16 49 H 0.08 -0.60 6.51 -2.39 -0.02 -0.61 16 50 H 0.08 -0.36 8.14 -2.39 -0.02 -0.38 16 51 H 0.14 0.51 8.06 -2.91 -0.02 0.49 16 Total: 0.00 -27.18 408.75 -2.89 -30.07 By element: Atomic # 1 Polarization: -22.25 SS G_CDS: -0.91 Total: -23.16 kcal Atomic # 6 Polarization: 4.22 SS G_CDS: 2.78 Total: 7.00 kcal Atomic # 7 Polarization: 3.10 SS G_CDS: -1.87 Total: 1.23 kcal Atomic # 8 Polarization: -7.39 SS G_CDS: -4.25 Total: -11.64 kcal Atomic # 14 Polarization: -4.31 SS G_CDS: 2.04 Total: -2.27 kcal Atomic # 35 Polarization: -0.55 SS G_CDS: -0.68 Total: -1.22 kcal Total: -27.18 -2.89 -30.07 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_15142604_6201210.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -96.013 kcal (2) G-P(sol) polarization free energy of solvation -27.182 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -123.196 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.886 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -30.068 kcal (6) G-S(sol) free energy of system = (1) + (5) -126.082 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.26 seconds