Wall clock time and date at job start Tue Mar 9 2021 13:11:02 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50703 * 1 3 3 C 1.37862 * 126.45976 * 2 1 4 4 C 1.46684 * 126.23067 * 359.95901 * 3 2 1 5 5 O 1.21694 * 119.99960 * 0.02562 * 4 3 2 6 6 N 1.34778 * 119.99810 * 179.97438 * 4 3 2 7 7 C 1.46503 * 119.99881 * 180.02562 * 6 4 3 8 8 H 1.09005 * 112.84709 * 336.20077 * 7 6 4 9 9 C 1.53777 * 113.69147 * 107.46610 * 7 6 4 10 10 C 1.53785 * 87.08232 * 89.12762 * 9 7 6 11 11 F 1.39896 * 113.69018 * 270.87547 * 10 9 7 12 12 C 1.52997 * 113.61261 * 139.98181 * 10 9 7 13 13 N 1.46494 * 109.47154 * 87.50618 * 12 10 9 14 14 C 1.34780 * 120.00166 * 179.97438 * 13 12 10 15 15 O 1.21513 * 119.99577 * 359.97438 * 14 13 12 16 16 O 1.34628 * 120.00286 * 179.97438 * 14 13 12 17 17 C 1.45202 * 117.00407 * 179.97438 * 16 14 13 18 18 C 1.53006 * 109.46867 * 59.99955 * 17 16 14 19 19 C 1.52999 * 109.47019 * 300.00782 * 17 16 14 20 20 C 1.52997 * 109.47464 * 180.02562 * 17 16 14 21 21 C 1.53773 * 113.61508 * 205.00305 * 7 6 4 22 22 N 1.37650 * 107.53934 * 180.22502 * 3 2 1 23 23 C 1.35539 * 108.63718 * 359.56614 * 22 3 2 24 24 C 1.50700 * 125.56165 * 180.20131 * 23 22 3 25 25 O 1.42896 * 109.47696 * 300.29836 * 24 23 22 26 26 Si 1.86299 * 109.47205 * 180.29682 * 24 23 22 27 27 C 1.35452 * 108.87496 * 0.43907 * 23 22 3 28 28 H 1.08998 * 109.47124 * 90.00552 * 1 2 3 29 29 H 1.09002 * 109.47228 * 210.00058 * 1 2 3 30 30 H 1.08997 * 109.47519 * 330.00100 * 1 2 3 31 31 H 0.96996 * 119.99963 * 0.02562 * 6 4 3 32 32 H 1.09006 * 113.61214 * 334.57762 * 9 7 6 33 33 H 1.09002 * 113.61835 * 203.67770 * 9 7 6 34 34 H 1.08995 * 109.46956 * 327.49994 * 12 10 9 35 35 H 1.08999 * 109.46717 * 207.50493 * 12 10 9 36 36 H 0.97000 * 120.00376 * 359.97438 * 13 12 10 37 37 H 1.09001 * 109.46801 * 300.00397 * 18 17 16 38 38 H 1.09001 * 109.46998 * 59.99993 * 18 17 16 39 39 H 1.09000 * 109.47050 * 180.02562 * 18 17 16 40 40 H 1.09000 * 109.47160 * 179.97438 * 19 17 16 41 41 H 1.09002 * 109.46719 * 299.99410 * 19 17 16 42 42 H 1.08993 * 109.47839 * 59.99251 * 19 17 16 43 43 H 1.09001 * 109.47375 * 300.00043 * 20 17 16 44 44 H 1.09002 * 109.46777 * 60.00599 * 20 17 16 45 45 H 1.09000 * 109.47140 * 180.02562 * 20 17 16 46 46 H 1.08995 * 113.61730 * 156.25130 * 21 7 6 47 47 H 1.09001 * 113.69322 * 25.35647 * 21 7 6 48 48 H 0.96992 * 125.68601 * 179.69921 * 22 3 2 49 49 H 1.09006 * 109.47056 * 60.29968 * 24 23 22 50 50 H 0.96705 * 113.99682 * 299.99930 * 25 24 23 51 51 H 1.48497 * 110.00155 * 180.02562 * 26 24 23 52 52 H 1.48507 * 109.99831 * 301.31972 * 26 24 23 53 53 H 1.08001 * 126.06855 * 179.69393 * 27 23 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3263 1.1088 0.0000 4 6 1.8898 2.5092 -0.0008 5 8 0.7026 2.7765 -0.0012 6 7 2.8037 3.4998 -0.0002 7 6 2.3678 4.8985 -0.0005 8 1 1.3647 5.0291 -0.4065 9 6 2.5866 5.6142 1.3429 10 6 3.9834 5.9940 0.8235 11 9 4.9685 5.0441 1.1140 12 6 4.4060 7.4187 1.1874 13 7 5.0507 7.4159 2.5028 14 6 5.5081 8.5681 3.0316 15 8 5.3861 9.6092 2.4170 16 8 6.1000 8.5657 4.2408 17 6 6.5690 9.8429 4.7479 18 6 5.3878 10.8077 4.8704 19 6 7.6049 10.4250 3.7841 20 6 7.2088 9.6419 6.1231 21 6 3.4041 5.8665 -0.5953 22 7 3.6284 0.6625 -0.0052 23 6 3.6217 -0.6929 0.0014 24 6 4.8433 -1.5754 0.0031 25 8 5.6251 -1.3091 -1.1630 26 14 4.3182 -3.3628 0.0038 27 6 2.3379 -1.1248 0.0009 28 1 -0.3633 -0.0001 -1.0276 29 1 -0.3634 -0.8900 0.5138 30 1 -0.3634 0.8899 0.5138 31 1 3.7500 3.2867 0.0004 32 1 2.6076 4.9394 2.1987 33 1 1.9291 6.4704 1.4937 34 1 3.5270 8.0626 1.2148 35 1 5.1065 7.7918 0.4403 36 1 5.1484 6.5848 2.9934 37 1 4.9324 10.9508 3.8905 38 1 4.6497 10.3930 5.5570 39 1 5.7398 11.7666 5.2506 40 1 7.9566 11.3840 4.1645 41 1 8.4464 9.7377 3.6968 42 1 7.1496 10.5681 2.8042 43 1 6.4710 9.2271 6.8099 44 1 8.0504 8.9548 6.0353 45 1 7.5603 10.6008 6.5039 46 1 2.9701 6.7917 -0.9744 47 1 4.0856 5.3969 -1.3046 48 1 4.4191 1.2242 -0.0105 49 1 5.4379 -1.3710 0.8936 50 1 5.1583 -1.4696 -1.9945 51 1 5.5139 -4.2435 0.0061 52 1 3.4780 -3.6449 1.1954 53 1 2.0136 -2.1550 0.0006 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_15734490_13940406.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:11:02 Heat of formation + Delta-G solvation = -128.342984 kcal Electronic energy + Delta-G solvation = -36155.784685 eV Core-core repulsion = 31138.206227 eV Total energy + Delta-G solvation = -5017.578458 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 384.194 amu Computer time = 1.28 seconds Orbital eigenvalues (eV) -49.01935 -42.62587 -41.87573 -40.79362 -39.20654 -38.37534 -37.69901 -36.07829 -35.08377 -34.42814 -33.39663 -31.64439 -29.31482 -28.40848 -28.34978 -28.18043 -27.13883 -26.91806 -24.42644 -23.10088 -22.66187 -21.64694 -21.34612 -20.74423 -20.42781 -19.60497 -19.37177 -18.13904 -17.85336 -17.47717 -17.29993 -16.99382 -16.83704 -16.72069 -16.50253 -16.20093 -15.93775 -15.72309 -15.50390 -15.37956 -15.24033 -15.05381 -14.84657 -14.56641 -14.47382 -14.38224 -14.00861 -13.85460 -13.65026 -13.59632 -13.53364 -13.41242 -13.17814 -13.12154 -12.97359 -12.96366 -12.92044 -12.79165 -12.52391 -12.40287 -12.18432 -12.00757 -11.69202 -11.46100 -11.42855 -11.20666 -11.17353 -10.68405 -10.40174 -10.31428 -9.84025 -9.22004 -4.92257 0.26602 1.03743 1.21769 1.50602 1.65257 1.71551 1.86383 1.94491 2.19075 2.20166 2.86518 2.93792 3.09155 3.18321 3.45117 3.52734 3.55553 3.55633 3.69249 3.74726 3.76530 3.89651 4.12147 4.20928 4.26731 4.31233 4.40521 4.44974 4.52748 4.57108 4.57406 4.64563 4.69571 4.70423 4.72205 4.76306 4.79988 4.80689 4.82213 4.83114 4.85300 4.91984 4.99825 5.14212 5.16091 5.22869 5.28479 5.31872 5.41217 5.49182 5.61044 5.83968 6.21461 6.24341 6.40676 6.66173 6.99649 7.20690 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.090 4.090 2 C -0.082 4.082 3 C -0.074 4.074 4 C 0.592 3.408 5 O -0.556 6.556 6 N -0.706 5.706 7 C 0.114 3.886 8 H 0.111 0.889 9 C -0.162 4.162 10 C 0.083 3.917 11 F -0.194 7.194 12 C 0.131 3.869 13 N -0.703 5.703 14 C 0.646 3.354 15 O -0.589 6.589 16 O -0.371 6.371 17 C 0.126 3.874 18 C -0.180 4.180 19 C -0.180 4.180 20 C -0.139 4.139 21 C -0.140 4.140 22 N -0.515 5.515 23 C 0.034 3.966 24 C -0.056 4.056 25 O -0.554 6.554 26 Si 0.805 3.195 27 C -0.208 4.208 28 H 0.072 0.928 29 H 0.078 0.922 30 H 0.060 0.940 31 H 0.405 0.595 32 H 0.075 0.925 33 H 0.131 0.869 34 H 0.104 0.896 35 H 0.083 0.917 36 H 0.414 0.586 37 H 0.065 0.935 38 H 0.061 0.939 39 H 0.088 0.912 40 H 0.088 0.912 41 H 0.060 0.940 42 H 0.065 0.935 43 H 0.069 0.931 44 H 0.068 0.932 45 H 0.100 0.900 46 H 0.145 0.855 47 H 0.098 0.902 48 H 0.425 0.575 49 H 0.115 0.885 50 H 0.399 0.601 51 H -0.295 1.295 52 H -0.284 1.284 53 H 0.168 0.832 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.432 -1.331 -1.546 2.492 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.147 4.147 2 C -0.091 4.091 3 C -0.187 4.187 4 C 0.381 3.619 5 O -0.434 6.434 6 N -0.357 5.357 7 C 0.009 3.991 8 H 0.129 0.871 9 C -0.200 4.200 10 C 0.065 3.935 11 F -0.174 7.174 12 C 0.008 3.992 13 N -0.363 5.363 14 C 0.399 3.601 15 O -0.480 6.480 16 O -0.286 6.286 17 C 0.090 3.910 18 C -0.237 4.237 19 C -0.237 4.237 20 C -0.196 4.196 21 C -0.178 4.178 22 N -0.112 5.112 23 C -0.085 4.085 24 C -0.166 4.166 25 O -0.362 6.362 26 Si 0.709 3.291 27 C -0.232 4.232 28 H 0.091 0.909 29 H 0.097 0.903 30 H 0.079 0.921 31 H 0.242 0.758 32 H 0.094 0.906 33 H 0.149 0.851 34 H 0.122 0.878 35 H 0.101 0.899 36 H 0.250 0.750 37 H 0.084 0.916 38 H 0.080 0.920 39 H 0.106 0.894 40 H 0.107 0.893 41 H 0.079 0.921 42 H 0.084 0.916 43 H 0.088 0.912 44 H 0.087 0.913 45 H 0.118 0.882 46 H 0.163 0.837 47 H 0.116 0.884 48 H 0.265 0.735 49 H 0.132 0.868 50 H 0.249 0.751 51 H -0.222 1.222 52 H -0.211 1.211 53 H 0.185 0.815 Dipole moment (debyes) X Y Z Total from point charges 1.185 -1.031 -0.933 1.827 hybrid contribution 1.217 0.398 0.698 1.458 sum 2.402 -0.633 -0.235 2.495 Atomic orbital electron populations 1.20348 0.88975 1.02818 1.02599 1.20181 0.96379 0.91164 1.01372 1.20147 0.84455 0.93154 1.20931 1.17164 0.85555 0.83605 0.75552 1.90819 1.17262 1.83671 1.51655 1.45543 1.09618 1.05419 1.75135 1.21914 1.00446 0.79757 0.97000 0.87130 1.24212 0.94810 1.02530 0.98492 1.22272 0.86355 0.85432 0.99490 1.92834 1.64042 1.66104 1.94440 1.21909 0.99357 0.95347 0.82580 1.44542 1.62306 1.08348 1.21141 1.18241 0.77133 0.84320 0.80360 1.90916 1.62348 1.31538 1.63188 1.86314 1.71050 1.38654 1.32561 1.22388 0.94356 0.79310 0.94915 1.22476 0.97828 0.99974 1.03409 1.22476 0.98327 1.02336 1.00586 1.21900 1.01082 1.04371 0.92205 1.23983 0.97576 1.01970 0.94309 1.41838 1.06832 1.06803 1.55758 1.21319 0.97122 0.83326 1.06722 1.25079 0.90730 1.09173 0.91579 1.86477 1.41997 1.91325 1.16420 0.92986 0.78985 0.70361 0.86792 1.20840 0.90729 0.99598 1.11995 0.90925 0.90336 0.92093 0.75838 0.90590 0.85114 0.87838 0.89867 0.74981 0.91566 0.91959 0.89362 0.89321 0.92073 0.91635 0.91242 0.91307 0.88161 0.83744 0.88371 0.73534 0.86782 0.75057 1.22228 1.21101 0.81481 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 -0.35 9.83 71.24 0.70 0.35 16 2 C -0.08 -0.35 6.21 -19.56 -0.12 -0.47 16 3 C -0.07 -0.27 7.06 40.35 0.28 0.01 16 4 C 0.59 3.07 7.79 86.45 0.67 3.74 16 5 O -0.56 -6.52 14.40 -4.33 -0.06 -6.59 16 6 N -0.71 0.93 5.18 -444.00 -2.30 -1.38 16 7 C 0.11 -0.42 4.32 45.51 0.20 -0.22 16 8 H 0.11 -0.14 7.46 -2.38 -0.02 -0.15 16 9 C -0.16 0.84 7.33 31.12 0.23 1.07 16 10 C 0.08 -0.49 1.73 -10.27 -0.02 -0.51 16 11 F -0.19 0.49 15.51 44.97 0.70 1.19 16 12 C 0.13 -0.49 5.42 86.38 0.47 -0.02 16 13 N -0.70 -0.25 5.45 -590.88 -3.22 -3.47 16 14 C 0.65 4.05 8.06 129.79 1.05 5.09 16 15 O -0.59 -6.27 11.88 19.80 0.24 -6.04 16 16 O -0.37 -2.15 9.94 -55.38 -0.55 -2.70 16 17 C 0.13 0.37 1.13 -10.79 -0.01 0.35 16 18 C -0.18 -0.49 8.37 71.98 0.60 0.11 16 19 C -0.18 -0.54 8.37 71.98 0.60 0.06 16 20 C -0.14 0.25 8.85 71.98 0.64 0.89 16 21 C -0.14 1.19 7.28 31.12 0.23 1.42 16 22 N -0.52 0.66 5.99 -171.93 -1.03 -0.37 16 23 C 0.03 -0.05 6.47 41.34 0.27 0.21 16 24 C -0.06 0.22 3.08 71.24 0.22 0.44 16 25 O -0.55 2.16 12.88 -148.98 -1.92 0.24 16 26 Si 0.80 -3.89 30.54 68.60 2.10 -1.80 16 27 C -0.21 0.00 9.27 22.01 0.20 0.20 16 28 H 0.07 0.22 8.14 -2.39 -0.02 0.20 16 29 H 0.08 0.04 8.14 -2.39 -0.02 0.02 16 30 H 0.06 0.50 6.49 -2.39 -0.02 0.48 16 31 H 0.41 -1.86 6.91 -92.71 -0.64 -2.50 16 32 H 0.08 -0.16 8.14 -2.38 -0.02 -0.17 16 33 H 0.13 -1.06 7.90 -2.39 -0.02 -1.07 16 34 H 0.10 -0.54 7.84 -2.39 -0.02 -0.56 16 35 H 0.08 -0.24 8.14 -2.39 -0.02 -0.26 16 36 H 0.41 -0.67 8.14 -92.71 -0.75 -1.42 16 37 H 0.07 0.50 5.88 -2.39 -0.01 0.48 16 38 H 0.06 0.14 8.14 -2.39 -0.02 0.12 16 39 H 0.09 -0.06 8.14 -2.39 -0.02 -0.08 16 40 H 0.09 -0.05 8.14 -2.39 -0.02 -0.07 16 41 H 0.06 0.16 8.14 -2.39 -0.02 0.14 16 42 H 0.06 0.52 5.88 -2.39 -0.01 0.50 16 43 H 0.07 -0.13 8.14 -2.39 -0.02 -0.15 16 44 H 0.07 -0.12 8.14 -2.39 -0.02 -0.14 16 45 H 0.10 -0.53 8.14 -2.39 -0.02 -0.55 16 46 H 0.14 -1.82 8.10 -2.39 -0.02 -1.84 16 47 H 0.10 -0.86 8.14 -2.39 -0.02 -0.88 16 48 H 0.43 -2.28 8.19 -92.71 -0.76 -3.04 16 49 H 0.11 -0.40 7.96 -2.38 -0.02 -0.42 16 50 H 0.40 -4.45 8.70 -74.05 -0.64 -5.10 16 51 H -0.29 -0.65 7.11 99.48 0.71 0.05 16 52 H -0.28 -0.17 7.11 99.48 0.71 0.53 16 53 H 0.17 -0.73 6.17 -2.91 -0.02 -0.75 16 Total: 0.00 -23.17 429.89 -1.63 -24.80 By element: Atomic # 1 Polarization: -14.86 SS G_CDS: -1.77 Total: -16.64 kcal Atomic # 6 Polarization: 6.53 SS G_CDS: 6.21 Total: 12.74 kcal Atomic # 7 Polarization: 1.34 SS G_CDS: -6.55 Total: -5.22 kcal Atomic # 8 Polarization: -12.78 SS G_CDS: -2.30 Total: -15.08 kcal Atomic # 9 Polarization: 0.49 SS G_CDS: 0.70 Total: 1.19 kcal Atomic # 14 Polarization: -3.89 SS G_CDS: 2.10 Total: -1.80 kcal Total: -23.17 -1.63 -24.80 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_15734490_13940406.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -103.543 kcal (2) G-P(sol) polarization free energy of solvation -23.173 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -126.717 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.626 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.800 kcal (6) G-S(sol) free energy of system = (1) + (5) -128.343 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.28 seconds