Wall clock time and date at job start Tue Mar 9 2021 14:13:44 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42895 * 1 3 3 Si 1.86303 * 109.47320 * 2 1 4 4 H 1.48498 * 109.47146 * 180.02562 * 3 2 1 5 5 H 1.48501 * 109.46717 * 299.99484 * 3 2 1 6 6 H 1.48500 * 109.47229 * 59.99681 * 3 2 1 7 7 C 1.50701 * 109.47045 * 119.99867 * 2 1 3 8 8 C 1.38265 * 119.94825 * 64.99857 * 7 2 1 9 9 C 1.38141 * 120.06229 * 180.02562 * 8 7 2 10 10 C 1.38737 * 119.93972 * 359.97438 * 9 8 7 11 11 O 1.35897 * 120.05333 * 180.02562 * 10 9 8 12 12 C 1.42905 * 117.00093 * 180.02562 * 11 10 9 13 13 C 1.50703 * 109.47264 * 179.97438 * 12 11 10 14 14 O 1.21279 * 119.99926 * 0.02562 * 13 12 11 15 15 N 1.34775 * 119.99773 * 179.97438 * 13 12 11 16 16 C 1.46496 * 119.99642 * 180.02562 * 15 13 12 17 17 C 1.52573 * 108.90839 * 276.37152 * 16 15 13 18 18 C 1.54426 * 109.16195 * 161.40287 * 17 16 15 19 19 Si 1.85202 * 107.00056 * 56.84391 * 18 17 16 20 20 C 1.87769 * 111.38279 * 81.15188 * 19 18 17 21 21 C 1.56399 * 98.96506 * 98.19783 * 20 19 18 22 22 C 1.53776 * 109.78746 * 39.36773 * 21 20 19 23 23 C 1.55686 * 111.39625 * 312.19646 * 22 21 20 24 24 C 1.85198 * 110.01770 * 317.14806 * 19 18 17 25 25 C 1.52569 * 108.90561 * 153.63162 * 16 15 13 26 26 C 1.38737 * 119.89063 * 0.27773 * 10 9 8 27 27 C 1.38149 * 119.94020 * 359.46855 * 26 10 9 28 28 H 0.96706 * 113.99797 * 300.00544 * 1 2 3 29 29 H 1.08999 * 109.47526 * 239.99495 * 2 1 3 30 30 H 1.08004 * 119.96780 * 359.97438 * 8 7 2 31 31 H 1.07997 * 120.03246 * 179.97438 * 9 8 7 32 32 H 1.09001 * 109.47103 * 300.00408 * 12 11 10 33 33 H 1.09004 * 109.47054 * 59.99912 * 12 11 10 34 34 H 0.96998 * 120.00166 * 0.02562 * 15 13 12 35 35 H 1.08996 * 108.89101 * 35.00203 * 16 15 13 36 36 H 1.09006 * 109.51656 * 281.40123 * 17 16 15 37 37 H 1.09002 * 109.51369 * 41.56475 * 17 16 15 38 38 H 1.09000 * 110.00843 * 297.44946 * 18 17 16 39 39 H 1.08999 * 109.98981 * 176.22587 * 18 17 16 40 40 H 1.09004 * 111.49600 * 215.63861 * 20 19 18 41 41 H 1.09007 * 111.49124 * 340.75961 * 20 19 18 42 42 H 1.08997 * 109.41529 * 279.27434 * 21 20 19 43 43 H 1.08998 * 109.41945 * 159.46913 * 21 20 19 44 44 H 1.09002 * 109.09966 * 191.68630 * 22 21 20 45 45 H 1.08997 * 109.10138 * 72.70714 * 22 21 20 46 46 H 1.09003 * 111.14402 * 270.08271 * 23 22 21 47 47 H 1.09003 * 111.18132 * 145.88761 * 23 22 21 48 48 H 1.09006 * 109.93629 * 283.40530 * 24 19 18 49 49 H 1.09000 * 110.00501 * 162.22578 * 24 19 18 50 50 H 1.08995 * 109.51749 * 318.43228 * 25 16 15 51 51 H 1.09007 * 109.51410 * 78.59403 * 25 16 15 52 52 H 1.08000 * 120.02659 * 179.72232 * 26 10 9 53 53 H 1.07999 * 119.97009 * 180.23164 * 27 26 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 1 3.5350 1.7564 -0.0006 5 1 1.5551 2.4564 -1.2126 6 1 1.5550 2.4566 1.2124 7 6 1.9313 -0.7104 1.2305 8 6 1.6840 -2.0605 1.3974 9 6 2.1429 -2.7139 2.5247 10 6 2.8530 -2.0143 3.4896 11 8 3.3059 -2.6549 4.5992 12 6 4.0291 -1.8716 5.5509 13 6 4.4479 -2.7446 6.7056 14 8 4.1563 -3.9218 6.7128 15 7 5.1474 -2.2174 7.7299 16 6 5.5550 -3.0662 8.8522 17 6 4.3966 -3.1703 9.8396 18 6 4.6192 -4.3939 10.7550 19 14 6.2659 -4.1667 11.5717 20 6 6.1445 -3.0125 13.0477 21 6 6.0580 -4.0812 14.1863 22 6 7.0075 -5.2504 13.8762 23 6 6.8427 -5.7418 12.4081 24 6 7.5063 -3.5577 10.3387 25 6 6.8076 -2.4737 9.4906 26 6 3.0953 -0.6585 3.3224 27 6 2.6387 -0.0109 2.1907 28 1 -0.3933 0.4418 0.7651 29 1 1.7924 -0.5139 -0.8899 30 1 1.1308 -2.6045 0.6461 31 1 1.9491 -3.7683 2.6547 32 1 4.9138 -1.4480 5.0755 33 1 3.3925 -1.0660 5.9171 34 1 5.3809 -1.2759 7.7240 35 1 5.7881 -4.0619 8.4750 36 1 4.3511 -2.2645 10.4444 37 1 3.4616 -3.2911 9.2925 38 1 4.6217 -5.3081 10.1615 39 1 3.8339 -4.4428 11.5093 40 1 7.0374 -2.3951 13.1465 41 1 5.2428 -2.4016 13.0039 42 1 5.0359 -4.4534 14.2570 43 1 6.3427 -3.6247 15.1343 44 1 6.7910 -6.0753 14.5549 45 1 8.0362 -4.9249 14.0301 46 1 6.0868 -6.5239 12.3378 47 1 7.7939 -6.0796 11.9968 48 1 7.8289 -4.3793 9.6991 49 1 8.3656 -3.1293 10.8547 50 1 7.4857 -2.1285 8.7102 51 1 6.5291 -1.6352 10.1291 52 1 3.6440 -0.1108 4.0743 53 1 2.8304 1.0436 2.0583 RHF calculation, no. of doubly occupied orbitals= 66 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_15739290_2989410.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 14:13:44 Heat of formation + Delta-G solvation = -125.057439 kcal Electronic energy + Delta-G solvation = -29664.639465 eV Core-core repulsion = 25624.371464 eV Total energy + Delta-G solvation = -4040.268002 eV No. of doubly occupied orbitals = 66 Molecular weight (most abundant/longest-lived isotopes) = 363.182 amu Computer time = 1.10 seconds Orbital eigenvalues (eV) -41.60617 -40.76823 -39.13536 -37.84227 -37.08001 -36.14519 -34.11812 -32.38595 -32.07150 -31.74335 -29.78643 -29.67246 -26.75124 -26.05304 -24.70843 -24.00345 -23.60972 -22.42036 -21.71718 -21.51673 -20.87344 -19.53807 -18.49548 -18.09622 -17.45774 -17.25861 -16.97995 -16.45646 -16.18096 -16.00938 -15.88540 -15.64254 -15.61762 -15.49467 -15.12304 -14.94001 -14.88569 -14.44860 -14.18897 -13.80771 -13.74071 -13.57907 -13.44694 -13.36536 -13.22921 -13.09127 -12.83530 -12.40081 -12.25935 -12.20575 -12.16868 -12.11838 -12.08171 -12.03302 -11.93875 -11.72700 -11.55506 -11.35608 -11.01223 -10.38583 -10.36403 -10.30743 -10.18568 -10.07944 -10.05437 -9.24650 0.25516 0.29100 1.21314 1.44085 1.47962 1.48160 1.54768 1.80125 1.90969 1.94729 1.96957 2.59089 2.64071 2.67939 3.50759 3.58904 3.70634 3.76059 3.82852 3.93583 4.00176 4.02160 4.10756 4.12767 4.15310 4.19653 4.27498 4.32015 4.41205 4.41801 4.50107 4.57680 4.64195 4.65569 4.70754 4.71470 4.80981 4.84117 4.95084 5.10711 5.13049 5.14438 5.15142 5.21055 5.23025 5.23900 5.26312 5.34818 5.37272 5.45217 5.48595 5.49418 5.54111 5.59727 5.69177 6.25316 6.48186 6.73790 7.14528 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.555 6.555 2 C -0.078 4.078 3 Si 0.984 3.016 4 H -0.255 1.255 5 H -0.279 1.279 6 H -0.247 1.247 7 C -0.161 4.161 8 C -0.055 4.055 9 C -0.165 4.165 10 C 0.120 3.880 11 O -0.320 6.320 12 C 0.036 3.964 13 C 0.510 3.490 14 O -0.572 6.572 15 N -0.707 5.707 16 C 0.133 3.867 17 C -0.117 4.117 18 C -0.425 4.425 19 Si 1.055 2.945 20 C -0.406 4.406 21 C -0.128 4.128 22 C -0.123 4.123 23 C -0.429 4.429 24 C -0.411 4.411 25 C -0.112 4.112 26 C -0.201 4.201 27 C -0.089 4.089 28 H 0.388 0.612 29 H 0.121 0.879 30 H 0.140 0.860 31 H 0.128 0.872 32 H 0.125 0.875 33 H 0.125 0.875 34 H 0.421 0.579 35 H 0.065 0.935 36 H 0.090 0.910 37 H 0.041 0.959 38 H 0.063 0.937 39 H 0.079 0.921 40 H 0.087 0.913 41 H 0.083 0.917 42 H 0.061 0.939 43 H 0.063 0.937 44 H 0.053 0.947 45 H 0.065 0.935 46 H 0.069 0.931 47 H 0.079 0.921 48 H 0.075 0.925 49 H 0.098 0.902 50 H 0.081 0.919 51 H 0.096 0.904 52 H 0.161 0.839 53 H 0.141 0.859 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.793 7.632 2.744 8.953 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.363 6.363 2 C -0.189 4.189 3 Si 0.808 3.192 4 H -0.179 1.179 5 H -0.205 1.205 6 H -0.170 1.170 7 C -0.161 4.161 8 C -0.073 4.073 9 C -0.184 4.184 10 C 0.074 3.926 11 O -0.233 6.233 12 C -0.042 4.042 13 C 0.296 3.704 14 O -0.450 6.450 15 N -0.361 5.361 16 C 0.029 3.971 17 C -0.155 4.155 18 C -0.509 4.509 19 Si 1.245 2.755 20 C -0.492 4.492 21 C -0.166 4.166 22 C -0.160 4.160 23 C -0.513 4.513 24 C -0.498 4.498 25 C -0.150 4.150 26 C -0.220 4.220 27 C -0.107 4.107 28 H 0.237 0.763 29 H 0.138 0.862 30 H 0.158 0.842 31 H 0.146 0.854 32 H 0.143 0.857 33 H 0.143 0.857 34 H 0.259 0.741 35 H 0.083 0.917 36 H 0.109 0.891 37 H 0.059 0.941 38 H 0.082 0.918 39 H 0.098 0.902 40 H 0.106 0.894 41 H 0.102 0.898 42 H 0.080 0.920 43 H 0.082 0.918 44 H 0.072 0.928 45 H 0.084 0.916 46 H 0.087 0.913 47 H 0.098 0.902 48 H 0.094 0.906 49 H 0.117 0.883 50 H 0.100 0.900 51 H 0.115 0.885 52 H 0.179 0.821 53 H 0.159 0.841 Dipole moment (debyes) X Y Z Total from point charges 3.942 7.108 2.217 8.425 hybrid contribution -0.362 -0.425 0.617 0.832 sum 3.579 6.683 2.834 8.093 Atomic orbital electron populations 1.86489 1.17711 1.81983 1.50069 1.25022 0.84752 1.10963 0.98116 0.85208 0.79702 0.74266 0.80009 1.17881 1.20485 1.17042 1.20382 1.02490 0.95047 0.98210 1.20950 0.96457 0.93895 0.96041 1.20664 1.02199 1.01102 0.94446 1.19231 0.94846 0.91855 0.86634 1.86133 1.69250 1.38360 1.29547 1.22763 0.99404 0.93655 0.88378 1.20564 0.77980 0.87991 0.83866 1.90762 1.55661 1.18826 1.79801 1.45857 1.55770 1.14571 1.19894 1.21172 0.94800 0.95103 0.86018 1.21707 0.97356 0.99299 0.97162 1.26439 1.19238 0.99744 1.05493 0.78810 0.64847 0.66241 0.65591 1.26718 1.05134 1.04921 1.12461 1.22076 0.99643 0.95275 0.99585 1.21883 1.00189 0.97568 0.96404 1.26735 1.06085 1.15018 1.03497 1.26181 1.10317 1.03362 1.09943 1.21594 0.94174 0.99033 1.00207 1.21457 1.06364 0.92886 1.01266 1.21092 0.96310 1.00204 0.93058 0.76271 0.86168 0.84215 0.85427 0.85693 0.85743 0.74077 0.91678 0.89107 0.94051 0.91848 0.90212 0.89434 0.89779 0.92036 0.91798 0.92799 0.91619 0.91252 0.90183 0.90646 0.88341 0.90005 0.88531 0.82104 0.84142 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -0.22 12.83 -148.98 -1.91 -2.13 16 2 C -0.08 0.11 2.80 71.24 0.20 0.31 16 3 Si 0.98 -2.66 25.13 68.60 1.72 -0.93 16 4 H -0.25 0.53 7.11 99.48 0.71 1.24 16 5 H -0.28 -0.42 7.11 99.48 0.71 0.29 16 6 H -0.25 0.92 7.04 99.48 0.70 1.62 16 7 C -0.16 -0.07 5.35 -19.85 -0.11 -0.17 16 8 C -0.06 -0.14 9.68 22.25 0.22 0.07 16 9 C -0.17 -0.84 9.99 22.37 0.22 -0.61 16 10 C 0.12 0.49 6.69 22.51 0.15 0.64 16 11 O -0.32 -2.12 9.67 -73.35 -0.71 -2.83 16 12 C 0.04 -0.09 5.22 71.24 0.37 0.28 16 13 C 0.51 1.70 7.68 87.66 0.67 2.37 16 14 O -0.57 -8.74 16.15 16.01 0.26 -8.48 16 15 N -0.71 2.89 5.02 -443.90 -2.23 0.66 16 16 C 0.13 -0.26 1.98 44.71 0.09 -0.17 16 17 C -0.12 0.09 5.24 30.94 0.16 0.26 16 18 C -0.42 0.25 4.96 72.47 0.36 0.61 16 19 Si 1.05 -5.63 10.56 68.60 0.72 -4.90 16 20 C -0.41 1.95 5.95 73.17 0.44 2.38 16 21 C -0.13 0.21 5.97 32.04 0.19 0.40 16 22 C -0.12 0.07 6.10 31.78 0.19 0.26 16 23 C -0.43 0.52 5.84 72.91 0.43 0.94 16 24 C -0.41 2.59 4.95 72.44 0.36 2.95 16 25 C -0.11 0.84 5.12 30.91 0.16 1.00 16 26 C -0.20 0.29 9.04 22.37 0.20 0.49 16 27 C -0.09 0.12 8.66 22.26 0.19 0.32 16 28 H 0.39 -2.35 8.70 -74.05 -0.64 -3.00 16 29 H 0.12 -0.31 7.96 -2.39 -0.02 -0.33 16 30 H 0.14 0.11 8.06 -2.91 -0.02 0.08 16 31 H 0.13 0.69 8.06 -2.91 -0.02 0.67 16 32 H 0.13 -1.14 7.67 -2.39 -0.02 -1.16 16 33 H 0.12 -1.13 7.65 -2.38 -0.02 -1.15 16 34 H 0.42 -5.21 8.59 -92.71 -0.80 -6.00 16 35 H 0.06 0.26 7.24 -2.39 -0.02 0.24 16 36 H 0.09 -0.52 7.75 -2.38 -0.02 -0.53 16 37 H 0.04 0.21 7.94 -2.39 -0.02 0.19 16 38 H 0.06 0.18 7.97 -2.39 -0.02 0.16 16 39 H 0.08 -0.06 7.97 -2.39 -0.02 -0.07 16 40 H 0.09 -0.53 8.04 -2.38 -0.02 -0.55 16 41 H 0.08 -0.47 8.04 -2.38 -0.02 -0.49 16 42 H 0.06 -0.09 8.14 -2.39 -0.02 -0.11 16 43 H 0.06 -0.09 8.14 -2.39 -0.02 -0.11 16 44 H 0.05 0.04 8.14 -2.39 -0.02 0.02 16 45 H 0.07 -0.10 8.14 -2.39 -0.02 -0.12 16 46 H 0.07 0.02 8.03 -2.39 -0.02 0.00 16 47 H 0.08 -0.13 8.03 -2.39 -0.02 -0.15 16 48 H 0.07 -0.34 7.97 -2.38 -0.02 -0.36 16 49 H 0.10 -0.81 7.97 -2.39 -0.02 -0.83 16 50 H 0.08 -0.69 8.13 -2.39 -0.02 -0.71 16 51 H 0.10 -1.11 7.75 -2.38 -0.02 -1.13 16 52 H 0.16 -1.37 6.30 -2.91 -0.02 -1.39 16 53 H 0.14 -0.75 4.86 -2.91 -0.01 -0.76 16 Total: 0.00 -23.30 415.08 2.57 -20.73 By element: Atomic # 1 Polarization: -14.66 SS G_CDS: 0.22 Total: -14.44 kcal Atomic # 6 Polarization: 7.84 SS G_CDS: 4.50 Total: 12.33 kcal Atomic # 7 Polarization: 2.89 SS G_CDS: -2.23 Total: 0.66 kcal Atomic # 8 Polarization: -11.08 SS G_CDS: -2.36 Total: -13.44 kcal Atomic # 14 Polarization: -8.28 SS G_CDS: 2.45 Total: -5.83 kcal Total: -23.30 2.57 -20.73 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_15739290_2989410.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -104.327 kcal (2) G-P(sol) polarization free energy of solvation -23.299 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -127.626 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.569 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.730 kcal (6) G-S(sol) free energy of system = (1) + (5) -125.057 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.10 seconds