Wall clock time and date at job start Tue Mar 9 2021 14:14:12 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42902 * 1 3 3 Si 1.86306 * 109.47042 * 2 1 4 4 H 1.48504 * 109.46673 * 180.02562 * 3 2 1 5 5 H 1.48495 * 109.47180 * 299.99997 * 3 2 1 6 6 H 1.48491 * 109.46932 * 60.00593 * 3 2 1 7 7 C 1.50697 * 109.47393 * 120.00148 * 2 1 3 8 8 C 1.38129 * 119.97079 * 64.99687 * 7 2 1 9 9 C 1.38748 * 119.94224 * 180.02562 * 8 7 2 10 10 O 1.35900 * 120.05465 * 180.02562 * 9 8 7 11 11 C 1.42898 * 117.00172 * 179.97438 * 10 9 8 12 12 C 1.52997 * 109.47319 * 179.97438 * 11 10 9 13 13 C 1.50697 * 109.47466 * 180.02562 * 12 11 10 14 14 O 1.21282 * 120.00011 * 0.02562 * 13 12 11 15 15 N 1.34777 * 120.00369 * 180.02562 * 13 12 11 16 16 C 1.46505 * 120.00115 * 180.02562 * 15 13 12 17 17 C 1.52570 * 108.90461 * 276.37032 * 16 15 13 18 18 C 1.54415 * 109.15874 * 161.40205 * 17 16 15 19 19 Si 1.85200 * 107.00488 * 56.84315 * 18 17 16 20 20 C 1.87769 * 111.38254 * 81.14591 * 19 18 17 21 21 C 1.56405 * 98.96062 * 98.20327 * 20 19 18 22 22 C 1.53779 * 109.78875 * 39.36719 * 21 20 19 23 23 C 1.55681 * 111.39545 * 312.19798 * 22 21 20 24 24 C 1.85204 * 110.01473 * 317.14834 * 19 18 17 25 25 C 1.52566 * 108.90351 * 153.62992 * 16 15 13 26 26 C 1.38710 * 119.88937 * 0.27204 * 9 8 7 27 27 C 1.38159 * 119.94311 * 359.45346 * 26 9 8 28 28 C 1.38250 * 120.05742 * 0.57011 * 27 26 9 29 29 H 0.96696 * 113.99487 * 299.99784 * 1 2 3 30 30 H 1.09005 * 109.47039 * 240.00263 * 2 1 3 31 31 H 1.07998 * 120.02418 * 0.02613 * 8 7 2 32 32 H 1.09002 * 109.47259 * 300.00149 * 11 10 9 33 33 H 1.09001 * 109.47074 * 60.00171 * 11 10 9 34 34 H 1.09002 * 109.47153 * 300.00307 * 12 11 10 35 35 H 1.08998 * 109.47533 * 59.99936 * 12 11 10 36 36 H 0.97003 * 119.99640 * 0.02562 * 15 13 12 37 37 H 1.08998 * 108.88112 * 34.99715 * 16 15 13 38 38 H 1.09004 * 109.51178 * 281.40170 * 17 16 15 39 39 H 1.09002 * 109.51733 * 41.56688 * 17 16 15 40 40 H 1.09004 * 110.01081 * 297.44793 * 18 17 16 41 41 H 1.08998 * 109.99195 * 176.22902 * 18 17 16 42 42 H 1.09000 * 111.49777 * 215.63651 * 20 19 18 43 43 H 1.08999 * 111.49790 * 340.76851 * 20 19 18 44 44 H 1.08995 * 109.41751 * 279.27390 * 21 20 19 45 45 H 1.08998 * 109.42025 * 159.46323 * 21 20 19 46 46 H 1.08996 * 109.10293 * 191.68052 * 22 21 20 47 47 H 1.09005 * 109.10260 * 72.70593 * 22 21 20 48 48 H 1.09001 * 111.14672 * 270.08218 * 23 22 21 49 49 H 1.09003 * 111.18070 * 145.88688 * 23 22 21 50 50 H 1.09002 * 109.93806 * 283.40086 * 24 19 18 51 51 H 1.09003 * 110.00304 * 162.22597 * 24 19 18 52 52 H 1.09001 * 109.51913 * 318.42265 * 25 16 15 53 53 H 1.09001 * 109.52072 * 78.59684 * 25 16 15 54 54 H 1.08006 * 120.02494 * 179.73033 * 26 9 8 55 55 H 1.08006 * 119.97038 * 180.27439 * 27 26 9 56 56 H 1.08000 * 119.94133 * 179.70045 * 28 27 26 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 1 3.5351 1.7564 -0.0006 5 1 1.5550 2.4565 -1.2125 6 1 1.5551 2.4564 1.2125 7 6 1.9314 -0.7104 1.2304 8 6 1.6846 -2.0592 1.3976 9 6 2.1470 -2.7125 2.5309 10 8 1.9059 -4.0396 2.6974 11 6 2.4122 -4.6465 3.8879 12 6 2.0448 -6.1317 3.8992 13 6 2.5782 -6.7717 5.1549 14 8 3.1914 -6.1054 5.9618 15 7 2.3738 -8.0845 5.3815 16 6 2.8918 -8.7065 6.6026 17 6 4.3539 -9.0833 6.3834 18 6 5.0338 -9.2942 7.7537 19 14 4.0629 -10.5949 8.6455 20 6 4.5442 -12.3186 8.0771 21 6 5.5355 -12.6872 9.2293 22 6 4.9924 -12.1656 10.5701 23 6 4.5319 -10.6827 10.4581 24 6 2.2488 -10.2938 8.4261 25 6 2.0280 -9.9162 6.9459 26 6 2.8513 -2.0079 3.4960 27 6 3.1004 -0.6602 3.3214 28 6 2.6382 -0.0113 2.1915 29 1 -0.3932 0.4417 0.7651 30 1 1.7924 -0.5138 -0.8900 31 1 1.1323 -2.6046 0.6467 32 1 3.4966 -4.5399 3.9173 33 1 1.9754 -4.1580 4.7589 34 1 0.9604 -6.2380 3.8700 35 1 2.4812 -6.6206 3.0282 36 1 1.8836 -8.6174 4.7360 37 1 2.8312 -7.9862 7.4184 38 1 4.4095 -10.0037 5.8020 39 1 4.8601 -8.2812 5.8463 40 1 5.0211 -8.3649 8.3234 41 1 6.0614 -9.6290 7.6122 42 1 3.6844 -12.9883 8.0605 43 1 5.0469 -12.2945 7.1102 44 1 6.5066 -12.2338 9.0308 45 1 5.6458 -13.7704 9.2798 46 1 5.7749 -12.2402 11.3252 47 1 4.1453 -12.7801 10.8752 48 1 5.3495 -9.9988 10.6862 49 1 3.6704 -10.4885 11.0970 50 1 1.9272 -9.4755 9.0704 51 1 1.6890 -11.1977 8.6666 52 1 0.9780 -9.6713 6.7853 53 1 2.3083 -10.7561 6.3102 54 1 3.2084 -2.5134 4.3812 55 1 3.6525 -0.1121 4.0706 56 1 2.8299 1.0433 2.0593 RHF calculation, no. of doubly occupied orbitals= 69 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_15739290_4549614.mol2 56 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 14:14:12 Heat of formation + Delta-G solvation = -133.646747 kcal Electronic energy + Delta-G solvation = -31379.891618 eV Core-core repulsion = 27183.713538 eV Total energy + Delta-G solvation = -4196.178081 eV No. of doubly occupied orbitals = 69 Molecular weight (most abundant/longest-lived isotopes) = 377.198 amu Computer time = 1.24 seconds Orbital eigenvalues (eV) -41.44921 -40.94011 -39.19205 -37.94587 -37.25351 -36.14786 -34.16131 -33.02163 -32.48407 -32.06926 -30.84404 -29.68492 -27.41904 -26.80377 -25.13243 -24.51540 -23.72874 -23.59980 -22.11415 -21.68276 -21.24567 -20.85427 -19.35497 -18.22102 -17.75035 -17.49906 -17.38597 -17.18510 -16.80741 -16.27913 -16.12244 -16.00295 -15.80703 -15.66646 -15.51415 -15.06543 -14.98952 -14.76503 -14.67346 -14.36159 -14.19670 -14.08117 -13.64637 -13.37991 -13.30642 -13.20062 -13.06067 -12.94078 -12.88490 -12.82001 -12.39367 -12.37527 -12.20040 -12.15267 -12.12004 -11.94287 -11.92580 -11.82910 -11.71707 -11.52560 -11.35926 -11.04835 -10.46153 -10.36154 -10.30635 -10.18343 -10.04155 -9.96021 -9.30311 0.17163 0.35289 1.16664 1.47649 1.53420 1.54787 1.69459 1.80711 1.91126 1.92911 1.96620 2.50126 2.63359 2.67674 3.50920 3.56609 3.67539 3.74667 3.82954 3.87049 3.94572 4.03753 4.09102 4.13048 4.15031 4.17871 4.20659 4.27080 4.32440 4.39070 4.41016 4.50524 4.54403 4.62622 4.65315 4.66289 4.67477 4.70335 4.76259 4.82282 4.84747 4.95727 5.10480 5.12819 5.15534 5.20855 5.22516 5.24326 5.26507 5.33881 5.36089 5.39180 5.40058 5.45471 5.51119 5.54341 5.59810 5.66805 6.30634 6.49561 6.69183 7.18783 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.551 6.551 2 C -0.082 4.082 3 Si 0.989 3.011 4 H -0.257 1.257 5 H -0.274 1.274 6 H -0.250 1.250 7 C -0.083 4.083 8 C -0.135 4.135 9 C 0.118 3.882 10 O -0.322 6.322 11 C 0.074 3.926 12 C -0.133 4.133 13 C 0.517 3.483 14 O -0.584 6.584 15 N -0.713 5.713 16 C 0.132 3.868 17 C -0.116 4.116 18 C -0.422 4.422 19 Si 1.054 2.946 20 C -0.408 4.408 21 C -0.128 4.128 22 C -0.123 4.123 23 C -0.427 4.427 24 C -0.411 4.411 25 C -0.114 4.114 26 C -0.212 4.212 27 C -0.077 4.077 28 C -0.170 4.170 29 H 0.389 0.611 30 H 0.125 0.875 31 H 0.135 0.865 32 H 0.063 0.937 33 H 0.064 0.936 34 H 0.127 0.873 35 H 0.126 0.874 36 H 0.419 0.581 37 H 0.068 0.932 38 H 0.086 0.914 39 H 0.044 0.956 40 H 0.066 0.934 41 H 0.079 0.921 42 H 0.085 0.915 43 H 0.082 0.918 44 H 0.062 0.938 45 H 0.062 0.938 46 H 0.054 0.946 47 H 0.064 0.936 48 H 0.070 0.930 49 H 0.080 0.920 50 H 0.076 0.924 51 H 0.096 0.904 52 H 0.079 0.921 53 H 0.092 0.908 54 H 0.135 0.865 55 H 0.148 0.852 56 H 0.136 0.864 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.633 -3.697 -0.398 4.061 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.358 6.358 2 C -0.192 4.192 3 Si 0.813 3.187 4 H -0.182 1.182 5 H -0.199 1.199 6 H -0.174 1.174 7 C -0.084 4.084 8 C -0.154 4.154 9 C 0.072 3.928 10 O -0.236 6.236 11 C -0.001 4.001 12 C -0.173 4.173 13 C 0.304 3.696 14 O -0.464 6.464 15 N -0.365 5.365 16 C 0.028 3.972 17 C -0.155 4.155 18 C -0.507 4.507 19 Si 1.244 2.756 20 C -0.494 4.494 21 C -0.165 4.165 22 C -0.161 4.161 23 C -0.512 4.512 24 C -0.498 4.498 25 C -0.152 4.152 26 C -0.231 4.231 27 C -0.095 4.095 28 C -0.188 4.188 29 H 0.238 0.762 30 H 0.143 0.857 31 H 0.153 0.847 32 H 0.082 0.918 33 H 0.082 0.918 34 H 0.145 0.855 35 H 0.144 0.856 36 H 0.256 0.744 37 H 0.086 0.914 38 H 0.105 0.895 39 H 0.062 0.938 40 H 0.084 0.916 41 H 0.098 0.902 42 H 0.104 0.896 43 H 0.101 0.899 44 H 0.080 0.920 45 H 0.081 0.919 46 H 0.073 0.927 47 H 0.083 0.917 48 H 0.089 0.911 49 H 0.098 0.902 50 H 0.095 0.905 51 H 0.114 0.886 52 H 0.097 0.903 53 H 0.111 0.889 54 H 0.153 0.847 55 H 0.166 0.834 56 H 0.153 0.847 Dipole moment (debyes) X Y Z Total from point charges -0.923 -2.812 -0.510 3.003 hybrid contribution 0.136 -0.304 0.791 0.859 sum -0.787 -3.116 0.281 3.226 Atomic orbital electron populations 1.86492 1.17313 1.82000 1.50038 1.25127 0.85011 1.11126 0.97956 0.85116 0.79601 0.73978 0.79981 1.18158 1.19948 1.17388 1.20253 0.97754 0.93538 0.96847 1.20356 1.03575 0.94149 0.97284 1.19166 0.95652 0.82978 0.94955 1.85955 1.74612 1.20205 1.42825 1.22430 0.99072 0.93135 0.85471 1.21448 1.05464 0.93407 0.96959 1.20640 0.78839 0.82577 0.87499 1.90733 1.42992 1.63691 1.48964 1.46038 1.57322 1.08998 1.24162 1.21145 0.93420 0.95730 0.86946 1.21695 0.94191 1.01941 0.97651 1.26404 1.07959 1.12907 1.03454 0.78822 0.65918 0.65756 0.65080 1.26736 1.03592 1.18495 1.00610 1.22075 0.99226 1.01292 0.93954 1.21883 1.00899 0.95739 0.97536 1.26715 1.05040 0.98025 1.21384 1.26194 1.20081 1.05628 0.97924 1.21593 1.00023 0.96447 0.97097 1.21526 1.04445 0.96440 1.00656 1.21193 0.97306 0.93590 0.97406 1.21197 1.01689 1.00591 0.95351 0.76173 0.85677 0.84696 0.91848 0.91778 0.85525 0.85572 0.74406 0.91406 0.89544 0.93766 0.91557 0.90210 0.89609 0.89883 0.91963 0.91876 0.92716 0.91697 0.91094 0.90158 0.90547 0.88576 0.90266 0.88917 0.84690 0.83397 0.84679 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -0.75 12.83 -148.98 -1.91 -2.66 16 2 C -0.08 0.00 2.80 71.23 0.20 0.20 16 3 Si 0.99 -0.96 25.14 68.60 1.72 0.76 16 4 H -0.26 -0.05 7.11 99.48 0.71 0.65 16 5 H -0.27 -0.62 7.11 99.48 0.71 0.08 16 6 H -0.25 0.33 7.04 99.48 0.70 1.03 16 7 C -0.08 -0.22 5.35 -19.88 -0.11 -0.33 16 8 C -0.13 -0.67 9.62 22.37 0.22 -0.45 16 9 C 0.12 0.70 6.69 22.50 0.15 0.85 16 10 O -0.32 -1.60 10.14 -92.43 -0.94 -2.53 16 11 C 0.07 0.16 4.03 71.98 0.29 0.45 16 12 C -0.13 0.44 6.07 29.85 0.18 0.62 16 13 C 0.52 0.78 7.60 87.66 0.67 1.45 16 14 O -0.58 -6.24 15.63 -3.04 -0.05 -6.29 16 15 N -0.71 2.66 5.02 -443.90 -2.23 0.43 16 16 C 0.13 -0.26 1.98 44.70 0.09 -0.18 16 17 C -0.12 0.12 5.24 30.93 0.16 0.28 16 18 C -0.42 0.50 4.96 72.46 0.36 0.86 16 19 Si 1.05 -5.62 10.56 68.60 0.72 -4.90 16 20 C -0.41 1.78 5.95 73.17 0.44 2.22 16 21 C -0.13 0.19 5.97 32.04 0.19 0.38 16 22 C -0.12 0.08 6.10 31.78 0.19 0.27 16 23 C -0.43 0.66 5.84 72.91 0.43 1.08 16 24 C -0.41 2.44 4.95 72.44 0.36 2.80 16 25 C -0.11 0.76 5.12 30.91 0.16 0.92 16 26 C -0.21 -0.93 9.04 22.36 0.20 -0.72 16 27 C -0.08 -0.17 10.04 22.25 0.22 0.05 16 28 C -0.17 -0.32 8.67 22.28 0.19 -0.13 16 29 H 0.39 -1.95 8.70 -74.06 -0.64 -2.60 16 30 H 0.13 -0.20 7.96 -2.38 -0.02 -0.22 16 31 H 0.14 0.58 8.06 -2.91 -0.02 0.56 16 32 H 0.06 0.24 7.63 -2.39 -0.02 0.22 16 33 H 0.06 0.23 7.61 -2.39 -0.02 0.21 16 34 H 0.13 -0.89 8.14 -2.39 -0.02 -0.91 16 35 H 0.13 -0.87 8.14 -2.39 -0.02 -0.89 16 36 H 0.42 -4.36 8.59 -92.71 -0.80 -5.16 16 37 H 0.07 0.21 7.24 -2.39 -0.02 0.19 16 38 H 0.09 -0.44 7.75 -2.39 -0.02 -0.46 16 39 H 0.04 0.18 7.94 -2.39 -0.02 0.16 16 40 H 0.07 0.11 7.97 -2.38 -0.02 0.09 16 41 H 0.08 -0.10 7.97 -2.39 -0.02 -0.12 16 42 H 0.09 -0.46 8.04 -2.39 -0.02 -0.48 16 43 H 0.08 -0.42 8.04 -2.39 -0.02 -0.44 16 44 H 0.06 -0.09 8.14 -2.39 -0.02 -0.11 16 45 H 0.06 -0.07 8.14 -2.39 -0.02 -0.09 16 46 H 0.05 0.03 8.14 -2.39 -0.02 0.01 16 47 H 0.06 -0.09 8.14 -2.38 -0.02 -0.11 16 48 H 0.07 -0.02 8.03 -2.39 -0.02 -0.04 16 49 H 0.08 -0.16 8.03 -2.39 -0.02 -0.18 16 50 H 0.08 -0.35 7.97 -2.39 -0.02 -0.37 16 51 H 0.10 -0.73 7.97 -2.39 -0.02 -0.74 16 52 H 0.08 -0.58 8.13 -2.39 -0.02 -0.59 16 53 H 0.09 -0.94 7.75 -2.39 -0.02 -0.96 16 54 H 0.14 0.41 6.30 -2.91 -0.02 0.39 16 55 H 0.15 -0.34 8.06 -2.91 -0.02 -0.37 16 56 H 0.14 -0.19 4.86 -2.91 -0.01 -0.20 16 Total: 0.00 -18.09 436.03 2.09 -16.00 By element: Atomic # 1 Polarization: -11.61 SS G_CDS: 0.18 Total: -11.44 kcal Atomic # 6 Polarization: 6.04 SS G_CDS: 4.59 Total: 10.63 kcal Atomic # 7 Polarization: 2.66 SS G_CDS: -2.23 Total: 0.43 kcal Atomic # 8 Polarization: -8.59 SS G_CDS: -2.90 Total: -11.49 kcal Atomic # 14 Polarization: -6.58 SS G_CDS: 2.45 Total: -4.14 kcal Total: -18.09 2.09 -16.00 kcal The number of atoms in the molecule is 56 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_15739290_4549614.mol2 56 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -117.649 kcal (2) G-P(sol) polarization free energy of solvation -18.087 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -135.736 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.089 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.998 kcal (6) G-S(sol) free energy of system = (1) + (5) -133.647 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.25 seconds