Wall clock time and date at job start Tue Mar 9 2021 14:36:32 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86293 * 109.46882 * 2 1 4 4 H 1.48501 * 109.47436 * 299.99877 * 3 2 1 5 5 H 1.48503 * 109.47152 * 60.00126 * 3 2 1 6 6 H 1.48508 * 109.46989 * 179.97438 * 3 2 1 7 7 C 1.50699 * 109.47203 * 240.00196 * 2 1 3 8 8 C 1.38251 * 119.93991 * 300.00254 * 7 2 1 9 9 C 1.38233 * 120.04427 * 180.02562 * 8 7 2 10 10 Br 1.89099 * 120.03627 * 179.97438 * 9 8 7 11 11 C 1.38792 * 119.92906 * 359.97438 * 9 8 7 12 12 O 1.35924 * 120.05910 * 180.02562 * 11 9 8 13 13 C 1.42896 * 116.99981 * 180.02562 * 12 11 9 14 14 C 1.50696 * 109.47216 * 179.97438 * 13 12 11 15 15 O 1.21284 * 120.00109 * 359.97438 * 14 13 12 16 16 N 1.34777 * 120.00137 * 179.97438 * 14 13 12 17 17 C 1.46506 * 119.99873 * 179.97438 * 16 14 13 18 18 C 1.52567 * 108.90761 * 276.37197 * 17 16 14 19 19 C 1.54429 * 109.15848 * 161.40118 * 18 17 16 20 20 Si 1.85199 * 106.99999 * 56.84691 * 19 18 17 21 21 C 1.87760 * 111.38491 * 81.15062 * 20 19 18 22 22 C 1.56394 * 98.96451 * 98.19806 * 21 20 19 23 23 C 1.53769 * 109.79161 * 39.36997 * 22 21 20 24 24 C 1.55692 * 111.39595 * 312.19661 * 23 22 21 25 25 C 1.85204 * 110.01617 * 317.14413 * 20 19 18 26 26 C 1.52569 * 108.90243 * 153.63308 * 17 16 14 27 27 C 1.38717 * 119.88245 * 0.27604 * 11 9 8 28 28 C 1.38142 * 119.95458 * 359.46790 * 27 11 9 29 29 H 0.96700 * 114.00611 * 299.99739 * 1 2 3 30 30 H 1.09001 * 109.47182 * 120.00018 * 2 1 3 31 31 H 1.07994 * 119.97655 * 0.02562 * 8 7 2 32 32 H 1.09004 * 109.47251 * 59.99770 * 13 12 11 33 33 H 1.09000 * 109.47075 * 299.99663 * 13 12 11 34 34 H 0.96995 * 120.00018 * 0.27749 * 16 14 13 35 35 H 1.08998 * 108.88319 * 35.00653 * 17 16 14 36 36 H 1.09000 * 109.51694 * 281.40125 * 18 17 16 37 37 H 1.09002 * 109.51493 * 41.57266 * 18 17 16 38 38 H 1.09004 * 110.00943 * 297.44823 * 19 18 17 39 39 H 1.09003 * 109.98980 * 176.22606 * 19 18 17 40 40 H 1.09001 * 111.49976 * 215.64310 * 21 20 19 41 41 H 1.09007 * 111.49515 * 340.75550 * 21 20 19 42 42 H 1.08997 * 109.41756 * 279.27149 * 22 21 20 43 43 H 1.09002 * 109.41911 * 159.46837 * 22 21 20 44 44 H 1.09003 * 109.10597 * 191.68419 * 23 22 21 45 45 H 1.09000 * 109.10482 * 72.70615 * 23 22 21 46 46 H 1.08996 * 111.14130 * 270.09107 * 24 23 22 47 47 H 1.08990 * 111.18381 * 145.88190 * 24 23 22 48 48 H 1.09004 * 109.93891 * 283.40845 * 25 20 19 49 49 H 1.09006 * 110.00224 * 162.22512 * 25 20 19 50 50 H 1.09004 * 109.51867 * 318.43033 * 26 17 16 51 51 H 1.08996 * 109.51778 * 78.53991 * 26 17 16 52 52 H 1.08000 * 120.02355 * 179.72614 * 27 11 9 53 53 H 1.07998 * 119.96681 * 180.25466 * 28 27 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7564 0.0000 4 1 1.5549 2.4565 -1.2125 5 1 1.5549 2.4564 1.2125 6 1 3.5350 1.7564 0.0006 7 6 1.9313 -0.7104 -1.2305 8 6 1.5966 -2.0339 -1.4481 9 6 2.0566 -2.6878 -2.5758 10 35 1.5992 -4.4984 -2.8728 11 6 2.8546 -2.0139 -3.4898 12 8 3.3080 -2.6541 -4.5998 13 6 4.1249 -1.8986 -5.4963 14 6 4.5307 -2.7669 -6.6591 15 8 4.1574 -3.9196 -6.7145 16 7 5.3083 -2.2627 -7.6377 17 6 5.7032 -3.1072 -8.7679 18 6 6.9258 -3.9278 -8.3685 19 6 7.0681 -5.1267 -9.3313 20 14 7.1727 -4.4347 -11.0460 21 6 8.9095 -3.8394 -11.4392 22 6 9.4220 -5.0880 -12.2293 23 6 8.2989 -5.6331 -13.1270 24 6 6.9614 -5.7721 -12.3422 25 6 5.9297 -3.0785 -11.2592 26 6 5.9734 -2.2184 -9.9782 27 6 3.1930 -0.6874 -3.2658 28 6 2.7263 -0.0371 -2.1399 29 1 -0.3934 0.4416 0.7650 30 1 1.7923 -0.5138 0.8900 31 1 0.9752 -2.5574 -0.7366 32 1 5.0164 -1.5536 -4.9724 33 1 3.5635 -1.0391 -5.8627 34 1 5.6101 -1.3421 -7.5914 35 1 4.8839 -3.7861 -9.0041 36 1 7.8178 -3.3041 -8.4267 37 1 6.8018 -4.2933 -7.3491 38 1 6.1988 -5.7788 -9.2460 39 1 7.9753 -5.6849 -9.0998 40 1 8.8938 -2.9483 -12.0668 41 1 9.4904 -3.6749 -10.5316 42 1 9.7305 -5.8608 -11.5253 43 1 10.2730 -4.8015 -12.8472 44 1 8.5911 -6.6109 -13.5100 45 1 8.1511 -4.9532 -13.9661 46 1 6.8765 -6.7562 -11.8814 47 1 6.1050 -5.5658 -12.9839 48 1 4.9342 -3.5035 -11.3877 49 1 6.1879 -2.4688 -12.1251 50 1 5.2122 -1.4403 -10.0358 51 1 6.9570 -1.7591 -9.8803 52 1 3.8175 -0.1622 -3.9733 53 1 2.9862 0.9968 -1.9675 RHF calculation, no. of doubly occupied orbitals= 69 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_15739290_6201210.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 14:36:32 Heat of formation + Delta-G solvation = -116.860746 kcal Electronic energy + Delta-G solvation = -31915.646266 eV Core-core repulsion = 27535.915697 eV Total energy + Delta-G solvation = -4379.730569 eV No. of doubly occupied orbitals = 69 Molecular weight (most abundant/longest-lived isotopes) = 441.093 amu Computer time = 1.15 seconds Orbital eigenvalues (eV) -41.70413 -40.81277 -39.16757 -37.82665 -37.22272 -36.14467 -34.11722 -33.62918 -32.06438 -32.01572 -30.57469 -29.75893 -29.67073 -26.81405 -26.09101 -24.71022 -23.97426 -23.59622 -22.31172 -21.70721 -21.50432 -20.87139 -19.60750 -18.56531 -18.28828 -17.51222 -17.41957 -17.08166 -16.71616 -16.17763 -15.93356 -15.90788 -15.78829 -15.66594 -15.54121 -15.13561 -14.94599 -14.67407 -14.46632 -14.18922 -14.11453 -13.95287 -13.64584 -13.51664 -13.37238 -13.22856 -13.08866 -12.82930 -12.59144 -12.40661 -12.29733 -12.20948 -12.17141 -12.11487 -11.93980 -11.93558 -11.83509 -11.77909 -11.71434 -11.35531 -11.21138 -10.98993 -10.37272 -10.31482 -10.30429 -10.18071 -10.06041 -9.97977 -9.31166 -0.09003 0.10861 0.61815 1.19963 1.41652 1.47707 1.49466 1.56095 1.80105 1.91312 1.94080 1.97282 2.35737 2.52017 2.67953 3.38849 3.49160 3.64587 3.73074 3.79140 3.92266 4.00511 4.02258 4.08044 4.11293 4.13154 4.15448 4.20461 4.30830 4.32836 4.41365 4.50841 4.51935 4.63167 4.65183 4.65945 4.70991 4.81617 4.82282 4.85328 4.94888 5.10982 5.13137 5.15816 5.21262 5.22356 5.24756 5.27398 5.35884 5.37716 5.44971 5.46034 5.50789 5.54287 5.60345 6.04359 6.49087 6.83611 7.17784 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.565 6.565 2 C -0.084 4.084 3 Si 0.980 3.020 4 H -0.263 1.263 5 H -0.258 1.258 6 H -0.248 1.248 7 C -0.116 4.116 8 C -0.031 4.031 9 C -0.144 4.144 10 Br -0.051 7.051 11 C 0.147 3.853 12 O -0.304 6.304 13 C 0.031 3.969 14 C 0.510 3.490 15 O -0.568 6.568 16 N -0.707 5.707 17 C 0.134 3.866 18 C -0.116 4.116 19 C -0.425 4.425 20 Si 1.054 2.946 21 C -0.405 4.405 22 C -0.128 4.128 23 C -0.123 4.123 24 C -0.430 4.430 25 C -0.411 4.411 26 C -0.112 4.112 27 C -0.189 4.189 28 C -0.071 4.071 29 H 0.399 0.601 30 H 0.095 0.905 31 H 0.143 0.857 32 H 0.131 0.869 33 H 0.130 0.870 34 H 0.421 0.579 35 H 0.064 0.936 36 H 0.091 0.909 37 H 0.041 0.959 38 H 0.062 0.938 39 H 0.079 0.921 40 H 0.087 0.913 41 H 0.084 0.916 42 H 0.061 0.939 43 H 0.064 0.936 44 H 0.053 0.947 45 H 0.065 0.935 46 H 0.068 0.932 47 H 0.079 0.921 48 H 0.074 0.926 49 H 0.098 0.902 50 H 0.081 0.919 51 H 0.097 0.903 52 H 0.178 0.822 53 H 0.151 0.849 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.628 9.964 0.137 10.987 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.374 6.374 2 C -0.193 4.193 3 Si 0.803 3.197 4 H -0.188 1.188 5 H -0.183 1.183 6 H -0.172 1.172 7 C -0.118 4.118 8 C -0.051 4.051 9 C -0.224 4.224 10 Br 0.034 6.966 11 C 0.099 3.901 12 O -0.216 6.216 13 C -0.047 4.047 14 C 0.295 3.705 15 O -0.445 6.445 16 N -0.361 5.361 17 C 0.030 3.970 18 C -0.155 4.155 19 C -0.509 4.509 20 Si 1.245 2.755 21 C -0.492 4.492 22 C -0.166 4.166 23 C -0.160 4.160 24 C -0.514 4.514 25 C -0.498 4.498 26 C -0.150 4.150 27 C -0.208 4.208 28 C -0.089 4.089 29 H 0.249 0.751 30 H 0.113 0.887 31 H 0.161 0.839 32 H 0.148 0.852 33 H 0.147 0.853 34 H 0.259 0.741 35 H 0.082 0.918 36 H 0.109 0.891 37 H 0.060 0.940 38 H 0.081 0.919 39 H 0.097 0.903 40 H 0.106 0.894 41 H 0.103 0.897 42 H 0.079 0.921 43 H 0.082 0.918 44 H 0.072 0.928 45 H 0.084 0.916 46 H 0.087 0.913 47 H 0.098 0.902 48 H 0.093 0.907 49 H 0.117 0.883 50 H 0.100 0.900 51 H 0.115 0.885 52 H 0.196 0.804 53 H 0.168 0.832 Dipole moment (debyes) X Y Z Total from point charges 4.517 8.771 -0.600 9.884 hybrid contribution -0.193 -0.193 0.574 0.636 sum 4.324 8.577 -0.026 9.606 Atomic orbital electron populations 1.86466 1.17563 1.82324 1.51071 1.24838 0.85643 1.11264 0.97591 0.85269 0.80066 0.73880 0.80477 1.18764 1.18252 1.17172 1.19506 1.00715 0.93708 0.97842 1.20901 0.95837 0.94184 0.94190 1.21292 1.08046 0.93039 0.99984 1.96749 1.92441 1.10607 1.96777 1.18780 0.93325 0.91683 0.86329 1.86251 1.64645 1.39726 1.31000 1.22881 0.97775 0.94451 0.89571 1.20506 0.78383 0.87629 0.83942 1.90786 1.55656 1.20076 1.78026 1.45840 1.51246 1.16890 1.22157 1.21155 0.97180 0.92844 0.85841 1.21702 0.98249 0.96718 0.98815 1.26442 1.04296 1.02119 1.18079 0.78820 0.66902 0.65988 0.63832 1.26708 1.18467 1.00181 1.03806 1.22073 0.98384 0.97444 0.98671 1.21884 0.94182 1.00959 0.99013 1.26739 0.98949 1.12872 1.12829 1.26178 1.11727 1.11831 1.00062 1.21590 1.04405 0.97714 0.91268 1.21489 1.05693 0.92357 1.01300 1.21216 0.94983 1.00237 0.92432 0.75082 0.88725 0.83874 0.85155 0.85283 0.74072 0.91759 0.89080 0.94035 0.91940 0.90251 0.89399 0.89741 0.92053 0.91766 0.92819 0.91605 0.91307 0.90216 0.90715 0.88341 0.90006 0.88496 0.80448 0.83200 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.57 0.60 12.74 -148.98 -1.90 -1.30 16 2 C -0.08 0.24 2.81 71.24 0.20 0.44 16 3 Si 0.98 -4.56 25.07 68.60 1.72 -2.84 16 4 H -0.26 0.51 7.11 99.48 0.71 1.21 16 5 H -0.26 1.04 7.11 99.48 0.71 1.74 16 6 H -0.25 1.20 7.11 99.48 0.71 1.91 16 7 C -0.12 -0.17 5.42 -19.85 -0.11 -0.28 16 8 C -0.03 -0.15 9.35 22.27 0.21 0.05 16 9 C -0.14 -1.12 6.24 22.40 0.14 -0.98 16 10 Br -0.05 -0.56 33.16 -20.37 -0.68 -1.23 16 11 C 0.15 0.70 6.68 22.52 0.15 0.85 16 12 O -0.30 -2.04 9.01 -73.65 -0.66 -2.70 16 13 C 0.03 -0.10 5.22 71.23 0.37 0.27 16 14 C 0.51 1.62 7.68 87.66 0.67 2.29 16 15 O -0.57 -8.74 16.15 16.00 0.26 -8.48 16 16 N -0.71 2.98 5.02 -443.89 -2.23 0.75 16 17 C 0.13 -0.24 1.98 44.70 0.09 -0.15 16 18 C -0.12 0.07 5.24 30.94 0.16 0.23 16 19 C -0.42 0.08 4.96 72.47 0.36 0.44 16 20 Si 1.05 -5.27 10.56 68.60 0.72 -4.54 16 21 C -0.41 1.88 5.94 73.16 0.43 2.31 16 22 C -0.13 0.18 5.97 32.04 0.19 0.37 16 23 C -0.12 0.03 6.10 31.78 0.19 0.23 16 24 C -0.43 0.33 5.84 72.91 0.43 0.76 16 25 C -0.41 2.46 4.95 72.44 0.36 2.82 16 26 C -0.11 0.82 5.12 30.91 0.16 0.98 16 27 C -0.19 0.39 9.04 22.36 0.20 0.59 16 28 C -0.07 0.10 8.66 22.26 0.19 0.30 16 29 H 0.40 -3.98 8.74 -74.06 -0.65 -4.63 16 30 H 0.09 -0.61 7.96 -2.39 -0.02 -0.62 16 31 H 0.14 0.56 8.06 -2.91 -0.02 0.54 16 32 H 0.13 -1.35 7.65 -2.38 -0.02 -1.37 16 33 H 0.13 -1.29 7.67 -2.39 -0.02 -1.31 16 34 H 0.42 -5.34 8.60 -92.71 -0.80 -6.14 16 35 H 0.06 0.28 7.24 -2.39 -0.02 0.26 16 36 H 0.09 -0.51 7.75 -2.39 -0.02 -0.53 16 37 H 0.04 0.22 7.94 -2.39 -0.02 0.20 16 38 H 0.06 0.22 7.97 -2.38 -0.02 0.20 16 39 H 0.08 -0.02 7.97 -2.39 -0.02 -0.04 16 40 H 0.09 -0.52 8.04 -2.39 -0.02 -0.54 16 41 H 0.08 -0.46 8.04 -2.38 -0.02 -0.48 16 42 H 0.06 -0.07 8.14 -2.39 -0.02 -0.09 16 43 H 0.06 -0.08 8.14 -2.39 -0.02 -0.10 16 44 H 0.05 0.06 8.14 -2.39 -0.02 0.04 16 45 H 0.07 -0.08 8.14 -2.39 -0.02 -0.10 16 46 H 0.07 0.06 8.03 -2.39 -0.02 0.04 16 47 H 0.08 -0.09 8.03 -2.39 -0.02 -0.11 16 48 H 0.07 -0.31 7.97 -2.39 -0.02 -0.33 16 49 H 0.10 -0.78 7.97 -2.38 -0.02 -0.80 16 50 H 0.08 -0.68 8.13 -2.39 -0.02 -0.70 16 51 H 0.10 -1.11 7.76 -2.39 -0.02 -1.13 16 52 H 0.18 -1.87 6.30 -2.91 -0.02 -1.89 16 53 H 0.15 -0.91 4.87 -2.91 -0.01 -0.92 16 Total: 0.00 -26.41 435.48 1.88 -24.53 By element: Atomic # 1 Polarization: -15.96 SS G_CDS: 0.24 Total: -15.71 kcal Atomic # 6 Polarization: 7.13 SS G_CDS: 4.40 Total: 11.53 kcal Atomic # 7 Polarization: 2.98 SS G_CDS: -2.23 Total: 0.75 kcal Atomic # 8 Polarization: -10.18 SS G_CDS: -2.30 Total: -12.48 kcal Atomic # 14 Polarization: -9.83 SS G_CDS: 2.44 Total: -7.39 kcal Atomic # 35 Polarization: -0.56 SS G_CDS: -0.68 Total: -1.23 kcal Total: -26.41 1.88 -24.53 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_15739290_6201210.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -92.335 kcal (2) G-P(sol) polarization free energy of solvation -26.409 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -118.744 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.883 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.526 kcal (6) G-S(sol) free energy of system = (1) + (5) -116.861 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.16 seconds