Wall clock time and date at job start Tue Mar 9 2021 15:15:49 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42906 * 1 3 3 Si 1.86296 * 109.47126 * 2 1 4 4 H 1.48504 * 109.47239 * 299.99608 * 3 2 1 5 5 H 1.48502 * 109.47352 * 59.99647 * 3 2 1 6 6 H 1.48505 * 109.46927 * 179.97438 * 3 2 1 7 7 C 1.50702 * 109.47242 * 239.99329 * 2 1 3 8 8 C 1.38638 * 119.93570 * 74.98152 * 7 2 1 9 9 F 1.35099 * 119.87894 * 0.04271 * 8 7 2 10 10 C 1.38671 * 120.23549 * 179.74266 * 8 7 2 11 11 C 1.37815 * 120.12108 * 0.56052 * 10 8 7 12 12 C 1.39671 * 119.87688 * 359.44200 * 11 10 8 13 13 C 1.47724 * 120.11860 * 180.30566 * 12 11 10 14 14 O 1.21572 * 119.99882 * 179.97438 * 13 12 11 15 15 N 1.34771 * 120.00124 * 359.97438 * 13 12 11 16 16 C 1.46502 * 120.00266 * 180.02562 * 15 13 12 17 17 C 1.52560 * 108.99424 * 276.16231 * 16 15 13 18 18 C 1.54011 * 109.45738 * 162.04442 * 17 16 15 19 19 Si 1.86517 * 107.16034 * 58.32144 * 18 17 16 20 20 C 1.86518 * 110.13757 * 75.81571 * 19 18 17 21 21 C 1.53975 * 107.20634 * 164.96093 * 20 19 18 22 22 C 1.52542 * 109.47508 * 301.76670 * 21 20 19 23 23 C 1.52551 * 111.91409 * 77.26631 * 22 21 20 24 24 C 1.53954 * 109.49305 * 282.74567 * 23 22 21 25 25 C 1.86536 * 108.14374 * 315.42978 * 19 18 17 26 26 C 1.52558 * 108.99406 * 153.84063 * 16 15 13 27 27 C 1.37851 * 119.94046 * 254.99987 * 7 2 1 28 28 H 0.96703 * 113.99156 * 60.00357 * 1 2 3 29 29 H 1.09008 * 109.46768 * 119.99830 * 2 1 3 30 30 H 1.08004 * 119.94312 * 180.30137 * 10 8 7 31 31 H 1.08002 * 120.06547 * 179.72341 * 11 10 8 32 32 H 0.97001 * 119.99997 * 0.02562 * 15 13 12 33 33 H 1.08996 * 108.97468 * 35.00380 * 16 15 13 34 34 H 1.08991 * 109.46923 * 282.12380 * 17 16 15 35 35 H 1.09004 * 109.46098 * 42.11406 * 17 16 15 36 36 H 1.09006 * 109.96945 * 298.89514 * 18 17 16 37 37 H 1.08997 * 109.96694 * 177.75132 * 18 17 16 38 38 H 1.08994 * 109.90669 * 284.38928 * 20 19 18 39 39 H 1.09003 * 109.91013 * 45.54089 * 20 19 18 40 40 H 1.09001 * 109.47282 * 181.76027 * 21 20 19 41 41 H 1.08998 * 109.46726 * 61.76675 * 21 20 19 42 42 H 1.09008 * 108.99111 * 316.64205 * 22 21 20 43 43 H 1.08998 * 108.92815 * 197.85269 * 22 21 20 44 44 H 1.09007 * 109.46607 * 162.74575 * 23 22 21 45 45 H 1.08993 * 109.46932 * 42.75300 * 23 22 21 46 46 H 1.09002 * 109.90492 * 298.77804 * 24 23 22 47 47 H 1.08997 * 109.91006 * 177.63103 * 24 23 22 48 48 H 1.08994 * 109.91078 * 285.11402 * 25 19 18 49 49 H 1.09005 * 109.97023 * 164.00228 * 25 19 18 50 50 H 1.09002 * 109.47190 * 317.90136 * 26 16 15 51 51 H 1.09000 * 109.47087 * 77.89783 * 26 16 15 52 52 H 1.07998 * 120.06454 * 0.02562 * 27 7 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 1 1.5551 2.4565 -1.2126 5 1 1.5550 2.4565 1.2125 6 1 3.5351 1.7564 0.0006 7 6 1.9314 -0.7106 -1.2304 8 6 1.8685 -0.0838 -2.4654 9 9 1.3576 1.1631 -2.5621 10 6 2.3339 -0.7298 -3.6008 11 6 2.8512 -2.0039 -3.5086 12 6 2.9169 -2.6399 -2.2668 13 6 3.4765 -4.0029 -2.1608 14 8 3.5331 -4.5543 -1.0788 15 7 3.9244 -4.6351 -3.2636 16 6 4.4789 -5.9871 -3.1586 17 6 5.9474 -5.8916 -2.7565 18 6 6.4192 -7.2521 -2.2101 19 14 6.1438 -8.5118 -3.5577 20 6 7.4517 -8.3381 -4.8761 21 6 7.4039 -9.6144 -5.7361 22 6 7.6416 -10.8335 -4.8506 23 6 6.3996 -11.2035 -4.0457 24 6 6.2512 -10.2369 -2.8566 25 6 4.4527 -8.2200 -4.2888 26 6 4.3015 -6.7017 -4.4947 27 6 2.4523 -1.9826 -1.1258 28 1 -0.3932 0.4417 -0.7651 29 1 1.7924 -0.5139 0.8901 30 1 2.2871 -0.2352 -4.5598 31 1 3.2093 -2.5079 -4.3941 32 1 3.8796 -4.1950 -4.1268 33 1 3.9351 -6.5344 -2.3887 34 1 6.5454 -5.6209 -3.6265 35 1 6.0639 -5.1308 -1.9846 36 1 5.8388 -7.5202 -1.3272 37 1 7.4784 -7.2046 -1.9572 38 1 7.2415 -7.4656 -5.4946 39 1 8.4338 -8.2386 -4.4139 40 1 8.1776 -9.5654 -6.5023 41 1 6.4264 -9.6957 -6.2115 42 1 8.4591 -10.6181 -4.1624 43 1 7.9213 -11.6784 -5.4798 44 1 6.4979 -12.2236 -3.6745 45 1 5.5188 -11.1323 -4.6837 46 1 7.1189 -10.3181 -2.2019 47 1 5.3427 -10.4689 -2.3009 48 1 3.6851 -8.5800 -3.6039 49 1 4.3670 -8.7348 -5.2458 50 1 3.3101 -6.4861 -4.8932 51 1 5.0589 -6.3529 -5.1967 52 1 2.5002 -2.4702 -0.1634 RHF calculation, no. of doubly occupied orbitals= 66 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_15739362_12496548.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 15:15:49 Heat of formation + Delta-G solvation = -132.101077 kcal Electronic energy + Delta-G solvation = -30814.984611 eV Core-core repulsion = 26623.639390 eV Total energy + Delta-G solvation = -4191.345220 eV No. of doubly occupied orbitals = 66 Molecular weight (most abundant/longest-lived isotopes) = 365.174 amu Computer time = 0.94 seconds Orbital eigenvalues (eV) -50.45284 -41.49843 -39.87002 -37.96123 -37.61051 -37.29068 -34.30201 -32.75747 -32.01922 -31.87912 -31.77342 -27.64700 -27.03168 -26.58995 -24.51700 -23.62165 -23.44533 -23.22135 -21.52179 -21.33119 -21.01443 -19.19965 -18.88859 -18.08841 -17.86230 -17.22592 -16.99292 -16.41610 -16.27405 -16.13858 -15.95234 -15.55818 -15.42948 -15.10429 -15.09163 -15.01691 -14.84332 -14.71406 -14.46418 -14.04407 -13.76356 -13.67378 -13.42147 -13.32756 -13.23673 -13.10501 -12.91287 -12.75594 -12.54208 -12.41332 -12.27807 -12.15419 -12.14297 -11.93234 -11.86534 -11.55331 -11.42419 -11.28130 -11.15794 -10.68198 -10.35401 -10.17321 -10.13466 -10.07319 -10.06333 -9.81755 -0.52987 -0.00177 1.06280 1.40969 1.43850 1.59512 1.86329 1.88692 1.89093 1.98693 2.06872 2.55446 2.68539 2.96021 3.27491 3.54050 3.55174 3.61035 3.77881 3.95958 4.04968 4.07231 4.10114 4.14342 4.22152 4.32191 4.34507 4.37556 4.50907 4.54133 4.63072 4.65220 4.66122 4.75205 4.82811 4.83738 4.87213 4.89044 4.97614 4.98353 5.04857 5.08213 5.17268 5.24039 5.24770 5.27869 5.30456 5.37269 5.42703 5.45177 5.50846 5.51177 5.55145 5.59576 5.69562 6.46604 6.51904 7.13459 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.547 6.547 2 C -0.082 4.082 3 Si 0.968 3.032 4 H -0.229 1.229 5 H -0.272 1.272 6 H -0.264 1.264 7 C -0.164 4.164 8 C 0.108 3.892 9 F -0.127 7.127 10 C -0.147 4.147 11 C -0.041 4.041 12 C -0.155 4.155 13 C 0.557 3.443 14 O -0.577 6.577 15 N -0.707 5.707 16 C 0.134 3.866 17 C -0.116 4.116 18 C -0.423 4.423 19 Si 1.056 2.944 20 C -0.408 4.408 21 C -0.112 4.112 22 C -0.135 4.135 23 C -0.112 4.112 24 C -0.425 4.425 25 C -0.408 4.408 26 C -0.113 4.113 27 C -0.026 4.026 28 H 0.387 0.613 29 H 0.128 0.872 30 H 0.175 0.825 31 H 0.176 0.824 32 H 0.416 0.584 33 H 0.067 0.933 34 H 0.087 0.913 35 H 0.041 0.959 36 H 0.062 0.938 37 H 0.077 0.923 38 H 0.086 0.914 39 H 0.072 0.928 40 H 0.059 0.941 41 H 0.073 0.927 42 H 0.060 0.940 43 H 0.060 0.940 44 H 0.053 0.947 45 H 0.072 0.928 46 H 0.069 0.931 47 H 0.071 0.929 48 H 0.073 0.927 49 H 0.095 0.905 50 H 0.079 0.921 51 H 0.094 0.906 52 H 0.138 0.862 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.567 -0.043 -8.106 8.256 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.354 6.354 2 C -0.191 4.191 3 Si 0.790 3.210 4 H -0.151 1.151 5 H -0.197 1.197 6 H -0.188 1.188 7 C -0.165 4.165 8 C 0.088 3.912 9 F -0.105 7.105 10 C -0.165 4.165 11 C -0.060 4.060 12 C -0.159 4.159 13 C 0.345 3.655 14 O -0.457 6.457 15 N -0.359 5.359 16 C 0.030 3.970 17 C -0.155 4.155 18 C -0.507 4.507 19 Si 1.246 2.754 20 C -0.495 4.495 21 C -0.149 4.149 22 C -0.173 4.173 23 C -0.150 4.150 24 C -0.510 4.510 25 C -0.494 4.494 26 C -0.151 4.151 27 C -0.045 4.045 28 H 0.235 0.765 29 H 0.146 0.854 30 H 0.192 0.808 31 H 0.193 0.807 32 H 0.254 0.746 33 H 0.086 0.914 34 H 0.106 0.894 35 H 0.059 0.941 36 H 0.081 0.919 37 H 0.096 0.904 38 H 0.105 0.895 39 H 0.091 0.909 40 H 0.078 0.922 41 H 0.092 0.908 42 H 0.079 0.921 43 H 0.079 0.921 44 H 0.072 0.928 45 H 0.091 0.909 46 H 0.088 0.912 47 H 0.090 0.910 48 H 0.092 0.908 49 H 0.114 0.886 50 H 0.098 0.902 51 H 0.112 0.888 52 H 0.156 0.844 Dipole moment (debyes) X Y Z Total from point charges 1.984 0.130 -6.803 7.088 hybrid contribution -0.263 0.085 -0.071 0.286 sum 1.721 0.214 -6.875 7.090 Atomic orbital electron populations 1.86538 1.17081 1.81801 1.49965 1.25022 0.85131 1.11070 0.97918 0.85709 0.79439 0.75107 0.80701 1.15149 1.19717 1.18793 1.20298 1.04691 0.96511 0.95042 1.18112 0.97660 0.80619 0.94817 1.91579 1.84587 1.37812 1.96550 1.21448 1.00475 0.95868 0.98754 1.21544 0.94097 0.93478 0.96865 1.20044 1.05468 0.94932 0.95419 1.18399 0.77238 0.85666 0.84218 1.90795 1.57865 1.68121 1.28964 1.45947 1.62174 1.17518 1.10294 1.21154 0.94108 0.82049 0.99699 1.21622 0.95115 0.97511 1.01206 1.26477 1.04064 1.07755 1.12393 0.78624 0.67024 0.64163 0.65595 1.26297 1.11975 1.00175 1.11034 1.21277 1.02450 0.93483 0.97718 1.21535 0.98362 0.98542 0.98856 1.21271 0.98319 0.98852 0.96536 1.26474 1.04153 1.17891 1.02474 1.26221 1.17482 0.97612 1.08129 1.21537 1.04141 0.94778 0.94650 1.21043 0.92318 0.91832 0.99283 0.76453 0.85440 0.80761 0.80687 0.74551 0.91442 0.89404 0.94064 0.91911 0.90385 0.89531 0.90921 0.92210 0.90829 0.92130 0.92102 0.92846 0.90931 0.91227 0.91048 0.90805 0.88636 0.90230 0.88754 0.84435 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -1.66 12.88 -148.98 -1.92 -3.57 16 2 C -0.08 -0.12 2.80 71.24 0.20 0.08 16 3 Si 0.97 1.44 26.09 68.60 1.79 3.23 16 4 H -0.23 -0.30 5.28 99.48 0.53 0.22 16 5 H -0.27 -1.25 7.11 99.48 0.71 -0.54 16 6 H -0.26 -0.88 7.11 99.48 0.71 -0.18 16 7 C -0.16 -0.25 4.78 -19.86 -0.09 -0.34 16 8 C 0.11 -0.08 6.63 22.47 0.15 0.07 16 9 F -0.13 -0.03 12.57 44.97 0.57 0.54 16 10 C -0.15 0.81 10.01 22.27 0.22 1.03 16 11 C -0.04 0.26 9.54 22.52 0.21 0.47 16 12 C -0.16 -0.12 5.87 -20.09 -0.12 -0.24 16 13 C 0.56 2.44 7.56 86.75 0.66 3.10 16 14 O -0.58 -7.85 15.99 -3.94 -0.06 -7.91 16 15 N -0.71 1.89 4.98 -446.92 -2.23 -0.33 16 16 C 0.13 -0.20 2.02 44.70 0.09 -0.11 16 17 C -0.12 0.07 5.20 30.79 0.16 0.23 16 18 C -0.42 0.33 4.97 72.32 0.36 0.69 16 19 Si 1.06 -5.82 9.18 68.60 0.63 -5.19 16 20 C -0.41 2.20 4.97 72.31 0.36 2.56 16 21 C -0.11 0.46 5.64 30.77 0.17 0.63 16 22 C -0.14 0.31 5.40 30.29 0.16 0.47 16 23 C -0.11 0.21 5.63 30.77 0.17 0.39 16 24 C -0.43 0.81 4.97 72.30 0.36 1.17 16 25 C -0.41 2.47 4.97 72.31 0.36 2.83 16 26 C -0.11 0.79 5.08 30.77 0.16 0.95 16 27 C -0.03 -0.08 9.21 22.52 0.21 0.12 16 28 H 0.39 -1.17 8.41 -74.06 -0.62 -1.79 16 29 H 0.13 0.00 7.77 -2.38 -0.02 -0.02 16 30 H 0.17 -1.91 8.06 -2.91 -0.02 -1.93 16 31 H 0.18 -2.51 6.40 -2.91 -0.02 -2.53 16 32 H 0.42 -4.28 6.62 -92.71 -0.61 -4.89 16 33 H 0.07 0.27 7.29 -2.39 -0.02 0.25 16 34 H 0.09 -0.45 7.71 -2.39 -0.02 -0.47 16 35 H 0.04 0.21 7.95 -2.38 -0.02 0.19 16 36 H 0.06 0.16 7.98 -2.38 -0.02 0.14 16 37 H 0.08 -0.08 7.98 -2.39 -0.02 -0.10 16 38 H 0.09 -0.66 7.98 -2.39 -0.02 -0.67 16 39 H 0.07 -0.31 7.98 -2.39 -0.02 -0.33 16 40 H 0.06 -0.21 8.14 -2.39 -0.02 -0.23 16 41 H 0.07 -0.45 7.72 -2.39 -0.02 -0.47 16 42 H 0.06 -0.09 7.89 -2.38 -0.02 -0.11 16 43 H 0.06 -0.13 8.14 -2.39 -0.02 -0.15 16 44 H 0.05 -0.03 8.14 -2.38 -0.02 -0.05 16 45 H 0.07 -0.28 7.72 -2.39 -0.02 -0.30 16 46 H 0.07 -0.06 7.98 -2.39 -0.02 -0.08 16 47 H 0.07 -0.10 7.98 -2.39 -0.02 -0.12 16 48 H 0.07 -0.31 7.98 -2.39 -0.02 -0.33 16 49 H 0.09 -0.76 7.98 -2.38 -0.02 -0.78 16 50 H 0.08 -0.62 8.13 -2.39 -0.02 -0.64 16 51 H 0.09 -1.04 7.71 -2.39 -0.02 -1.06 16 52 H 0.14 0.70 7.58 -2.91 -0.02 0.68 16 Total: 0.00 -18.26 401.68 2.83 -15.42 By element: Atomic # 1 Polarization: -16.55 SS G_CDS: 0.26 Total: -16.29 kcal Atomic # 6 Polarization: 10.31 SS G_CDS: 3.79 Total: 14.10 kcal Atomic # 7 Polarization: 1.89 SS G_CDS: -2.23 Total: -0.33 kcal Atomic # 8 Polarization: -9.51 SS G_CDS: -1.98 Total: -11.49 kcal Atomic # 9 Polarization: -0.03 SS G_CDS: 0.57 Total: 0.54 kcal Atomic # 14 Polarization: -4.38 SS G_CDS: 2.42 Total: -1.96 kcal Total: -18.26 2.83 -15.42 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_15739362_12496548.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -116.676 kcal (2) G-P(sol) polarization free energy of solvation -18.255 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -134.931 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.830 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.425 kcal (6) G-S(sol) free energy of system = (1) + (5) -132.101 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.94 seconds