Wall clock time and date at job start Tue Mar 9 2021 15:53:52 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86300 * 109.47200 * 2 1 4 4 C 1.50701 * 109.47038 * 239.99946 * 2 1 3 5 5 C 1.38244 * 119.97086 * 120.02159 * 4 2 1 6 6 C 1.38291 * 120.11176 * 179.97438 * 5 4 2 7 7 C 1.38125 * 120.05293 * 359.76605 * 6 5 4 8 8 C 1.38752 * 119.94593 * 0.51068 * 7 6 5 9 9 O 1.35904 * 120.05921 * 179.74651 * 8 7 6 10 10 C 1.42899 * 116.99475 * 359.71951 * 9 8 7 11 11 C 1.53006 * 109.46685 * 179.97438 * 10 9 8 12 12 C 1.53001 * 109.46969 * 179.97438 * 11 10 9 13 13 C 1.50701 * 109.47012 * 180.02562 * 12 11 10 14 14 O 1.21281 * 119.99826 * 0.02562 * 13 12 11 15 15 N 1.34776 * 120.00012 * 180.02562 * 13 12 11 16 16 C 1.46495 * 120.00140 * 180.02562 * 15 13 12 17 17 H 1.08999 * 112.84965 * 23.80634 * 16 15 13 18 18 C 1.53787 * 113.61299 * 154.99919 * 16 15 13 19 19 C 1.53776 * 87.08000 * 89.11992 * 18 16 15 20 20 H 1.09007 * 113.61407 * 270.79853 * 19 18 16 21 21 C 1.52997 * 113.61638 * 139.98096 * 19 18 16 22 22 F 1.39905 * 109.47157 * 59.99612 * 21 19 18 23 23 F 1.39900 * 109.47010 * 300.00003 * 21 19 18 24 24 F 1.39897 * 109.47422 * 179.97438 * 21 19 18 25 25 C 1.53772 * 113.61787 * 252.49655 * 16 15 13 26 26 C 1.38161 * 119.97311 * 300.00204 * 4 2 1 27 27 H 0.96705 * 114.00081 * 60.00082 * 1 2 3 28 28 H 1.08991 * 109.47122 * 120.00059 * 2 1 3 29 29 H 1.48507 * 109.99850 * 298.68349 * 3 2 1 30 30 H 1.48495 * 109.99958 * 59.99678 * 3 2 1 31 31 H 1.08003 * 119.94683 * 359.97438 * 5 4 2 32 32 H 1.07990 * 119.97410 * 180.02562 * 6 5 4 33 33 H 1.08000 * 120.02964 * 180.27762 * 7 6 5 34 34 H 1.09007 * 109.46911 * 60.00906 * 10 9 8 35 35 H 1.08987 * 109.47710 * 300.00359 * 10 9 8 36 36 H 1.09007 * 109.46667 * 60.00805 * 11 10 9 37 37 H 1.08996 * 109.47179 * 300.00802 * 11 10 9 38 38 H 1.09007 * 109.46760 * 60.00873 * 12 11 10 39 39 H 1.09003 * 109.47346 * 300.00870 * 12 11 10 40 40 H 0.97008 * 119.99666 * 0.02562 * 15 13 12 41 41 H 1.09001 * 113.61522 * 334.56277 * 18 16 15 42 42 H 1.09003 * 113.61103 * 203.67026 * 18 16 15 43 43 H 1.08998 * 113.61809 * 156.33250 * 25 16 15 44 44 H 1.09003 * 113.61577 * 25.43289 * 25 16 15 45 45 H 1.07999 * 120.02981 * 0.04173 * 26 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7104 -1.2305 5 6 2.7264 -0.0381 -2.1399 6 6 3.1894 -0.6874 -3.2697 7 6 2.8622 -2.0112 -3.4898 8 6 2.0596 -2.6865 -2.5815 9 8 1.7320 -3.9875 -2.7984 10 6 2.2440 -4.5960 -3.9856 11 6 1.7737 -6.0503 -4.0567 12 6 2.3213 -6.7017 -5.3282 13 6 1.8575 -8.1339 -5.3986 14 8 1.1576 -8.5886 -4.5187 15 7 2.2206 -8.9094 -6.4394 16 6 1.7694 -10.3015 -6.5081 17 1 0.8588 -10.4799 -5.9362 18 6 1.7180 -10.8624 -7.9391 19 6 3.1813 -11.2909 -7.7395 20 1 3.9032 -10.5261 -8.0263 21 6 3.5041 -12.6643 -8.3313 22 9 3.2579 -12.6482 -9.7084 23 9 2.6986 -13.6343 -7.7250 24 9 4.8507 -12.9661 -8.1023 25 6 2.8834 -11.3246 -6.2312 26 6 1.5972 -2.0332 -1.4486 27 1 -0.3933 0.4417 -0.7651 28 1 1.7923 -0.5138 0.8899 29 1 1.5878 2.4586 -1.2243 30 1 1.5615 2.4679 1.2084 31 1 2.9865 0.9959 -1.9677 32 1 3.8107 -0.1602 -3.9784 33 1 3.2277 -2.5191 -4.3700 34 1 3.3335 -4.5675 -3.9677 35 1 1.8805 -4.0532 -4.8580 36 1 0.6841 -6.0793 -4.0744 37 1 2.1375 -6.5929 -3.1843 38 1 3.4108 -6.6727 -5.3110 39 1 1.9570 -6.1589 -6.2005 40 1 2.7808 -8.5458 -7.1430 41 1 1.5875 -10.0968 -8.7038 42 1 1.0298 -11.6997 -8.0554 43 1 2.5140 -12.2882 -5.8805 44 1 3.6940 -10.9321 -5.6171 45 1 0.9757 -2.5578 -0.7380 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_15744634_4549616.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 15:53:52 Heat of formation + Delta-G solvation = -211.404082 kcal Electronic energy + Delta-G solvation = -30576.571798 eV Core-core repulsion = 25532.630461 eV Total energy + Delta-G solvation = -5043.941337 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 360.138 amu Computer time = 0.86 seconds Orbital eigenvalues (eV) -51.10807 -48.63582 -48.59569 -41.41369 -41.19733 -39.57000 -39.14396 -37.41474 -34.90353 -34.42974 -32.45832 -31.24110 -29.35986 -28.00735 -26.95250 -26.81305 -24.38616 -23.69020 -23.37928 -21.92395 -21.51270 -20.77211 -19.51202 -19.37186 -19.20768 -18.79678 -17.98401 -17.90627 -17.44936 -17.15811 -17.03475 -16.82306 -16.40544 -16.15762 -15.83297 -15.53138 -15.51862 -15.27079 -15.05378 -14.97041 -14.82120 -14.77945 -14.73078 -14.60673 -14.37465 -14.16295 -14.09611 -13.67649 -13.59853 -13.25485 -13.20741 -13.07630 -12.72546 -12.32584 -12.31149 -12.27318 -11.94064 -11.89311 -11.63361 -11.58886 -11.54961 -11.00480 -10.68139 -10.17723 -9.90964 -9.23028 -4.90891 0.22873 0.42482 1.29701 1.57463 1.62065 1.77816 1.88402 1.97777 2.35354 2.69207 2.72289 2.80205 2.97459 3.39613 3.40507 3.55277 3.62462 3.67274 3.70218 3.86217 3.90514 3.95049 4.00137 4.12784 4.21282 4.26692 4.36175 4.43415 4.43712 4.46906 4.56532 4.57324 4.63920 4.66311 4.70301 4.78993 4.84631 4.95509 5.00583 5.02904 5.18438 5.30538 5.40237 5.46769 5.48329 5.76311 6.44788 6.45974 6.49786 7.22808 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.551 6.551 2 C -0.093 4.093 3 Si 0.782 3.218 4 C -0.083 4.083 5 C -0.160 4.160 6 C -0.073 4.073 7 C -0.205 4.205 8 C 0.116 3.884 9 O -0.339 6.339 10 C 0.057 3.943 11 C -0.103 4.103 12 C -0.127 4.127 13 C 0.513 3.487 14 O -0.586 6.586 15 N -0.701 5.701 16 C 0.122 3.878 17 H 0.092 0.908 18 C -0.123 4.123 19 C -0.155 4.155 20 H 0.159 0.841 21 C 0.453 3.547 22 F -0.189 7.189 23 F -0.190 7.190 24 F -0.193 7.193 25 C -0.142 4.142 26 C -0.152 4.152 27 H 0.386 0.614 28 H 0.120 0.880 29 H -0.278 1.278 30 H -0.305 1.305 31 H 0.148 0.852 32 H 0.159 0.841 33 H 0.155 0.845 34 H 0.085 0.915 35 H 0.083 0.917 36 H 0.058 0.942 37 H 0.059 0.941 38 H 0.131 0.869 39 H 0.130 0.870 40 H 0.421 0.579 41 H 0.111 0.889 42 H 0.104 0.896 43 H 0.099 0.901 44 H 0.089 0.911 45 H 0.115 0.885 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.238 4.627 -6.693 10.253 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.359 6.359 2 C -0.200 4.200 3 Si 0.687 3.313 4 C -0.083 4.083 5 C -0.178 4.178 6 C -0.090 4.090 7 C -0.223 4.223 8 C 0.071 3.929 9 O -0.254 6.254 10 C -0.017 4.017 11 C -0.141 4.141 12 C -0.166 4.166 13 C 0.301 3.699 14 O -0.466 6.466 15 N -0.354 5.354 16 C 0.016 3.984 17 H 0.111 0.889 18 C -0.161 4.161 19 C -0.174 4.174 20 H 0.176 0.824 21 C 0.399 3.601 22 F -0.171 7.171 23 F -0.172 7.172 24 F -0.175 7.175 25 C -0.180 4.180 26 C -0.171 4.171 27 H 0.235 0.765 28 H 0.138 0.862 29 H -0.205 1.205 30 H -0.233 1.233 31 H 0.165 0.835 32 H 0.177 0.823 33 H 0.172 0.828 34 H 0.103 0.897 35 H 0.101 0.899 36 H 0.077 0.923 37 H 0.078 0.922 38 H 0.149 0.851 39 H 0.148 0.852 40 H 0.259 0.741 41 H 0.129 0.871 42 H 0.123 0.877 43 H 0.118 0.882 44 H 0.107 0.893 45 H 0.133 0.867 Dipole moment (debyes) X Y Z Total from point charges 5.511 4.633 -5.444 9.027 hybrid contribution -1.002 -0.883 -0.722 1.518 sum 4.509 3.750 -6.167 8.510 Atomic orbital electron populations 1.86575 1.18666 1.80530 1.50119 1.25432 0.83441 1.12681 0.98480 0.93896 0.90105 0.70913 0.76401 1.20137 0.97882 0.93370 0.96954 1.21187 1.00322 1.00901 0.95349 1.21311 0.97435 0.93526 0.96775 1.21610 1.02569 0.96822 1.01325 1.19200 0.95215 0.83609 0.94905 1.86057 1.71687 1.22858 1.44789 1.23007 0.99763 0.93149 0.85798 1.21166 1.01556 0.92992 0.98406 1.21543 1.04802 0.90344 0.99916 1.21211 0.78808 0.89153 0.80697 1.90756 1.39579 1.76144 1.40091 1.45569 1.53559 1.10813 1.25460 1.21622 0.97811 0.81287 0.97672 0.88936 1.23339 0.92938 1.02663 0.97141 1.24204 1.02421 0.92001 0.98808 0.82362 1.20847 0.73693 0.89548 0.75980 1.93187 1.94018 1.96982 1.32875 1.93156 1.73718 1.67117 1.83211 1.93181 1.35257 1.94696 1.94334 1.23515 1.00067 1.01281 0.93177 1.20318 1.04200 0.94904 0.97704 0.76479 0.86173 1.20469 1.23315 0.83514 0.82303 0.82790 0.89680 0.89878 0.92294 0.92172 0.85133 0.85198 0.74080 0.87077 0.87730 0.88243 0.89270 0.86718 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -2.76 12.77 -148.98 -1.90 -4.67 16 2 C -0.09 -0.12 2.82 71.24 0.20 0.08 16 3 Si 0.78 -1.50 29.79 68.60 2.04 0.54 16 4 C -0.08 -0.17 5.39 -19.88 -0.11 -0.27 16 5 C -0.16 0.29 8.67 22.28 0.19 0.49 16 6 C -0.07 0.26 10.04 22.26 0.22 0.48 16 7 C -0.20 0.35 9.04 22.37 0.20 0.56 16 8 C 0.12 0.47 6.69 22.51 0.15 0.62 16 9 O -0.34 -1.70 10.14 -92.47 -0.94 -2.64 16 10 C 0.06 -0.22 4.74 71.98 0.34 0.12 16 11 C -0.10 0.19 4.87 30.60 0.15 0.34 16 12 C -0.13 1.19 5.70 29.85 0.17 1.36 16 13 C 0.51 -1.02 7.83 87.66 0.69 -0.33 16 14 O -0.59 -5.61 15.58 -3.03 -0.05 -5.65 16 15 N -0.70 5.66 5.26 -440.05 -2.32 3.35 16 16 C 0.12 -0.63 4.32 45.52 0.20 -0.43 16 17 H 0.09 0.02 7.46 -2.39 -0.02 0.00 16 18 C -0.12 1.05 7.18 31.12 0.22 1.27 16 19 C -0.16 1.19 3.68 -10.27 -0.04 1.15 16 20 H 0.16 -2.04 8.14 -2.38 -0.02 -2.06 16 21 C 0.45 -0.50 3.02 71.98 0.22 -0.29 16 22 F -0.19 -0.18 17.18 44.97 0.77 0.59 16 23 F -0.19 -0.36 15.75 44.97 0.71 0.34 16 24 F -0.19 -0.39 17.32 44.97 0.78 0.39 16 25 C -0.14 0.74 7.31 31.12 0.23 0.96 16 26 C -0.15 -0.88 9.55 22.37 0.21 -0.67 16 27 H 0.39 -0.36 8.70 -74.05 -0.64 -1.01 16 28 H 0.12 0.06 7.96 -2.39 -0.02 0.04 16 29 H -0.28 -0.30 7.11 99.48 0.71 0.41 16 30 H -0.30 -1.83 7.11 99.48 0.71 -1.12 16 31 H 0.15 -0.91 4.87 -2.91 -0.01 -0.93 16 32 H 0.16 -1.51 8.06 -2.92 -0.02 -1.54 16 33 H 0.15 -1.16 6.30 -2.91 -0.02 -1.17 16 34 H 0.09 -0.69 7.65 -2.38 -0.02 -0.71 16 35 H 0.08 -0.65 7.67 -2.39 -0.02 -0.67 16 36 H 0.06 0.18 8.10 -2.38 -0.02 0.16 16 37 H 0.06 0.17 8.10 -2.39 -0.02 0.15 16 38 H 0.13 -1.97 8.14 -2.38 -0.02 -1.99 16 39 H 0.13 -1.94 8.14 -2.39 -0.02 -1.96 16 40 H 0.42 -6.52 8.70 -92.70 -0.81 -7.32 16 41 H 0.11 -1.33 8.14 -2.39 -0.02 -1.35 16 42 H 0.10 -0.75 7.88 -2.39 -0.02 -0.77 16 43 H 0.10 -0.32 7.13 -2.39 -0.02 -0.34 16 44 H 0.09 -0.46 8.14 -2.39 -0.02 -0.48 16 45 H 0.11 0.96 8.06 -2.91 -0.02 0.94 16 Total: 0.00 -26.02 386.22 1.99 -24.03 By element: Atomic # 1 Polarization: -21.34 SS G_CDS: -0.36 Total: -21.71 kcal Atomic # 6 Polarization: 2.18 SS G_CDS: 3.25 Total: 5.43 kcal Atomic # 7 Polarization: 5.66 SS G_CDS: -2.32 Total: 3.35 kcal Atomic # 8 Polarization: -10.07 SS G_CDS: -2.89 Total: -12.96 kcal Atomic # 9 Polarization: -0.93 SS G_CDS: 2.26 Total: 1.33 kcal Atomic # 14 Polarization: -1.50 SS G_CDS: 2.04 Total: 0.54 kcal Total: -26.02 1.99 -24.03 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_15744634_4549616.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -187.375 kcal (2) G-P(sol) polarization free energy of solvation -26.019 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -213.394 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.990 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.029 kcal (6) G-S(sol) free energy of system = (1) + (5) -211.404 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.86 seconds