Wall clock time and date at job start Tue Mar 9 2021 15:54:06 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42895 * 1 3 3 C 1.35992 * 117.00487 * 2 1 4 4 C 1.39152 * 120.07559 * 180.02562 * 3 2 1 5 5 O 1.35989 * 120.07303 * 359.97438 * 4 3 2 6 6 C 1.42907 * 117.00040 * 179.72613 * 5 4 3 7 7 C 1.50698 * 109.47042 * 180.02562 * 6 5 4 8 8 O 1.21284 * 119.99987 * 0.02562 * 7 6 5 9 9 N 1.34775 * 119.99908 * 179.97438 * 7 6 5 10 10 C 1.46500 * 120.00006 * 180.02562 * 9 7 6 11 11 H 1.08998 * 112.85290 * 23.80288 * 10 9 7 12 12 C 1.53777 * 113.61748 * 155.00348 * 10 9 7 13 13 C 1.53778 * 87.08479 * 89.19792 * 12 10 9 14 14 H 1.09007 * 113.61285 * 270.80692 * 13 12 10 15 15 C 1.52997 * 113.61679 * 139.98340 * 13 12 10 16 16 F 1.39905 * 109.47157 * 61.52895 * 15 13 12 17 17 F 1.39900 * 109.47010 * 301.53286 * 15 13 12 18 18 F 1.39897 * 109.47422 * 181.52978 * 15 13 12 19 19 C 1.53783 * 87.17189 * 25.39160 * 13 12 10 20 20 C 1.38565 * 119.85123 * 179.72593 * 4 3 2 21 21 C 1.38241 * 120.00396 * 0.27323 * 20 4 3 22 22 N 1.48007 * 119.93060 * 179.97438 * 21 20 4 23 23 O 1.21799 * 119.99658 * 0.02562 * 22 21 20 24 24 O 1.21799 * 120.00255 * 179.97438 * 22 21 20 25 25 C 1.38257 * 120.14346 * 359.97438 * 21 20 4 26 26 C 1.50700 * 119.92475 * 180.02562 * 25 21 20 27 27 O 1.42894 * 109.47199 * 74.99651 * 26 25 21 28 28 Si 1.86294 * 109.47019 * 194.99921 * 26 25 21 29 29 C 1.38241 * 120.14694 * 0.02562 * 25 21 20 30 30 H 1.09001 * 109.47301 * 300.00189 * 1 2 3 31 31 H 1.09005 * 109.47448 * 59.99531 * 1 2 3 32 32 H 1.08997 * 109.47681 * 180.02562 * 1 2 3 33 33 H 1.08998 * 109.46984 * 60.00218 * 6 5 4 34 34 H 1.09002 * 109.46732 * 300.00221 * 6 5 4 35 35 H 0.96998 * 120.00318 * 0.02562 * 9 7 6 36 36 H 1.09006 * 113.61080 * 334.64742 * 12 10 9 37 37 H 1.08997 * 113.61849 * 203.75232 * 12 10 9 38 38 H 1.09000 * 113.61048 * 89.16040 * 19 13 12 39 39 H 1.09003 * 113.61260 * 220.06009 * 19 13 12 40 40 H 1.08005 * 120.00105 * 180.29583 * 20 4 3 41 41 H 1.09006 * 109.46954 * 314.99924 * 26 25 21 42 42 H 0.96696 * 114.00229 * 60.00133 * 27 26 25 43 43 H 1.48504 * 110.00209 * 179.97438 * 28 26 25 44 44 H 1.48498 * 109.99979 * 301.31694 * 28 26 25 45 45 H 1.07993 * 119.99686 * 180.02562 * 29 25 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0464 1.2116 0.0000 4 6 3.4360 1.2862 -0.0005 5 8 4.1795 0.1476 -0.0005 6 6 5.6003 0.3005 -0.0072 7 6 6.2518 -1.0584 -0.0068 8 8 5.5668 -2.0593 -0.0018 9 7 7.5956 -1.1615 -0.0130 10 6 8.2289 -2.4825 -0.0132 11 1 7.5813 -3.2624 -0.4138 12 6 9.6439 -2.4872 -0.6154 13 6 10.1622 -2.1823 0.8000 14 1 10.2214 -1.1170 1.0232 15 6 11.4439 -2.9368 1.1591 16 9 12.4668 -2.5628 0.2809 17 9 11.2195 -4.3137 1.0541 18 9 11.8175 -2.6238 2.4704 19 6 8.8837 -2.8526 1.3301 20 6 4.0603 2.5232 -0.0063 21 6 3.3030 3.6797 -0.0058 22 7 3.9716 5.0002 -0.0113 23 8 5.1878 5.0670 -0.0168 24 8 3.3057 6.0200 -0.0113 25 6 1.9225 3.6057 0.0000 26 6 1.1018 4.8696 -0.0001 27 8 1.1297 5.4556 -1.3030 28 14 -0.6575 4.4677 0.4626 29 6 1.2933 2.3748 0.0057 30 1 -0.3634 0.5139 0.8900 31 1 -0.3634 0.5139 -0.8900 32 1 -0.3634 -1.0276 0.0005 33 1 5.9104 0.8527 0.8799 34 1 5.9026 0.8477 -0.9001 35 1 8.1434 -0.3610 -0.0174 36 1 9.8181 -1.6805 -1.3274 37 1 9.9542 -3.4612 -0.9937 38 1 8.9859 -3.9267 1.4848 39 1 8.4452 -2.3404 2.1866 40 1 5.1386 2.5839 -0.0115 41 1 1.5163 5.5720 0.7232 42 1 0.7750 4.8852 -1.9986 43 1 -1.4772 5.7060 0.4668 44 1 -1.2236 3.4865 -0.4976 45 1 0.2148 2.3197 0.0098 There are 74 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 74 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_15744634_4549636.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 15:54:06 Heat of formation + Delta-G solvation = -216.307186 kcal Electronic energy + Delta-G solvation = -38909.144553 eV Core-core repulsion = 32870.829592 eV Total energy + Delta-G solvation = -6038.314961 eV No. of doubly occupied orbitals = 74 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 407.116 amu Computer time = 1.23 seconds Orbital eigenvalues (eV) -51.09494 -48.62067 -48.58544 -43.37499 -42.12286 -41.40222 -40.11432 -39.32662 -39.02251 -37.71245 -37.22674 -34.68451 -32.68851 -32.53968 -30.25989 -28.93587 -28.44953 -27.90432 -26.95428 -25.83889 -24.35366 -23.76839 -23.20052 -22.13392 -20.90279 -20.71324 -19.85550 -19.55740 -19.47564 -19.35993 -18.93330 -18.65585 -18.53943 -18.32585 -17.74213 -17.59809 -17.42078 -16.92970 -16.87212 -16.47971 -16.19982 -15.97135 -15.67250 -15.55792 -15.50408 -15.21190 -15.03442 -14.94463 -14.80269 -14.76699 -14.74886 -14.48375 -14.25939 -14.00506 -13.77454 -13.61855 -13.58924 -13.44711 -13.05671 -12.69249 -12.48137 -12.47365 -12.36523 -12.32864 -12.23491 -12.11036 -11.91265 -11.70000 -11.64854 -11.13471 -10.64548 -10.47768 -10.29217 -9.48951 -5.00310 -1.34167 -0.43143 0.18435 0.32752 1.13467 1.20420 1.34763 1.46333 1.79568 1.87684 1.89052 1.94037 2.29044 2.72956 2.80822 2.97874 2.98334 3.16709 3.26322 3.39552 3.41475 3.46527 3.49576 3.56419 3.70110 3.88472 3.94578 3.96299 3.97847 4.06548 4.10313 4.25620 4.32216 4.38325 4.42323 4.58397 4.60051 4.62348 4.72288 4.74638 4.77278 4.85358 4.90753 5.28470 5.36798 5.57897 6.04511 6.34233 6.43382 6.50205 7.04074 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.000 4.000 2 O -0.306 6.306 3 C 0.169 3.831 4 C 0.103 3.897 5 O -0.291 6.291 6 C 0.026 3.974 7 C 0.522 3.478 8 O -0.562 6.562 9 N -0.693 5.693 10 C 0.126 3.874 11 H 0.099 0.901 12 C -0.122 4.122 13 C -0.158 4.158 14 H 0.159 0.841 15 C 0.453 3.547 16 F -0.190 7.190 17 F -0.190 7.190 18 F -0.194 7.194 19 C -0.141 4.141 20 C -0.108 4.108 21 C -0.043 4.043 22 N 0.036 4.964 23 O -0.186 6.186 24 O -0.165 6.165 25 C -0.034 4.034 26 C -0.102 4.102 27 O -0.529 6.529 28 Si 0.774 3.226 29 C -0.173 4.173 30 H 0.089 0.911 31 H 0.074 0.926 32 H 0.122 0.878 33 H 0.132 0.868 34 H 0.130 0.870 35 H 0.423 0.577 36 H 0.112 0.888 37 H 0.108 0.892 38 H 0.102 0.898 39 H 0.091 0.909 40 H 0.186 0.814 41 H 0.128 0.872 42 H 0.383 0.617 43 H -0.296 1.296 44 H -0.250 1.250 45 H 0.186 0.814 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.141 -1.969 0.701 3.773 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.094 4.094 2 O -0.218 6.218 3 C 0.120 3.880 4 C 0.056 3.944 5 O -0.203 6.203 6 C -0.052 4.052 7 C 0.308 3.692 8 O -0.439 6.439 9 N -0.348 5.348 10 C 0.020 3.980 11 H 0.117 0.883 12 C -0.160 4.160 13 C -0.177 4.177 14 H 0.176 0.824 15 C 0.399 3.601 16 F -0.171 7.171 17 F -0.171 7.171 18 F -0.175 7.175 19 C -0.179 4.179 20 C -0.128 4.128 21 C -0.127 4.127 22 N 0.549 4.451 23 O -0.396 6.396 24 O -0.379 6.379 25 C -0.036 4.036 26 C -0.209 4.209 27 O -0.336 6.336 28 Si 0.675 3.325 29 C -0.191 4.191 30 H 0.107 0.893 31 H 0.092 0.908 32 H 0.140 0.860 33 H 0.149 0.851 34 H 0.147 0.853 35 H 0.262 0.738 36 H 0.130 0.870 37 H 0.126 0.874 38 H 0.121 0.879 39 H 0.109 0.891 40 H 0.203 0.797 41 H 0.146 0.854 42 H 0.232 0.768 43 H -0.223 1.223 44 H -0.175 1.175 45 H 0.203 0.797 Dipole moment (debyes) X Y Z Total from point charges -4.434 -3.241 0.782 5.548 hybrid contribution 1.301 0.841 -1.031 1.861 sum -3.133 -2.400 -0.249 3.954 Atomic orbital electron populations 1.23738 0.74999 1.06939 1.03709 1.86323 1.24510 1.24658 1.86291 1.18679 0.89268 0.86248 0.93804 1.17916 0.88644 0.85153 1.02695 1.86299 1.18526 1.26795 1.88726 1.22932 0.78774 0.95941 1.07546 1.20298 0.82881 0.90462 0.75595 1.90801 1.63860 1.39787 1.49441 1.45319 1.05214 1.09498 1.74739 1.21696 0.93976 0.85796 0.96527 0.88339 1.23353 0.92683 1.05699 0.94289 1.24238 0.88951 1.03190 1.01330 0.82355 1.20849 0.87221 0.78019 0.73986 1.93189 1.63405 1.91173 1.69353 1.93157 1.94623 1.33569 1.95788 1.93183 1.92975 1.92699 1.38651 1.23558 0.92882 1.02589 0.98904 1.20916 1.03071 0.88039 1.00751 1.20537 0.92653 0.81996 1.17516 1.43700 1.00817 1.03396 0.97194 1.94502 0.96500 1.94103 1.54537 1.94582 1.64457 1.25376 1.53449 1.20083 0.91050 0.97317 0.95192 1.25763 1.11644 0.93868 0.89599 1.86773 1.85270 1.45063 1.16489 0.94247 0.70244 0.79695 0.88302 1.21212 1.02207 0.88445 1.07261 0.89299 0.90753 0.85951 0.85050 0.85285 0.73794 0.86988 0.87396 0.87944 0.89074 0.79712 0.85408 0.76808 1.22321 1.17494 0.79707 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.00 0.00 9.81 113.37 1.11 1.12 16 2 O -0.31 0.20 10.28 -79.60 -0.82 -0.61 16 3 C 0.17 -0.30 6.70 22.57 0.15 -0.15 16 4 C 0.10 -0.11 6.70 22.57 0.15 0.04 16 5 O -0.29 -0.33 9.45 -67.01 -0.63 -0.96 16 6 C 0.03 -0.18 5.22 71.24 0.37 0.19 16 7 C 0.52 -1.06 7.91 87.66 0.69 -0.37 16 8 O -0.56 -5.35 16.10 16.00 0.26 -5.09 16 9 N -0.69 6.28 5.26 -439.76 -2.32 3.97 16 10 C 0.13 -0.83 4.33 45.58 0.20 -0.64 16 11 H 0.10 -0.18 7.46 -2.39 -0.02 -0.20 16 12 C -0.12 1.19 7.20 31.12 0.22 1.41 16 13 C -0.16 1.34 3.67 -10.27 -0.04 1.30 16 14 H 0.16 -2.14 8.14 -2.38 -0.02 -2.16 16 15 C 0.45 -0.76 3.01 71.98 0.22 -0.54 16 16 F -0.19 -0.13 17.20 44.97 0.77 0.65 16 17 F -0.19 -0.20 15.74 44.97 0.71 0.50 16 18 F -0.19 -0.33 17.32 44.97 0.78 0.45 16 19 C -0.14 0.92 7.33 31.18 0.23 1.15 16 20 C -0.11 0.27 8.54 22.35 0.19 0.46 16 21 C -0.04 -0.07 6.85 36.38 0.25 0.18 16 22 N 0.04 0.28 4.45 -46.46 -0.21 0.07 16 23 O -0.19 -1.64 18.44 18.89 0.35 -1.30 16 24 O -0.16 -1.84 14.62 25.10 0.37 -1.48 16 25 C -0.03 0.06 5.26 -19.86 -0.10 -0.05 16 26 C -0.10 0.08 1.74 71.24 0.12 0.21 16 27 O -0.53 -1.39 11.80 -129.63 -1.53 -2.92 16 28 Si 0.77 -4.70 30.24 68.60 2.07 -2.63 16 29 C -0.17 0.92 7.65 22.35 0.17 1.09 16 30 H 0.09 -1.21 7.65 -2.39 -0.02 -1.23 16 31 H 0.07 -0.87 7.68 -2.38 -0.02 -0.88 16 32 H 0.12 -1.35 8.14 -2.39 -0.02 -1.37 16 33 H 0.13 -1.77 7.66 -2.39 -0.02 -1.79 16 34 H 0.13 -1.69 7.66 -2.39 -0.02 -1.71 16 35 H 0.42 -6.99 8.70 -92.71 -0.81 -7.80 16 36 H 0.11 -1.45 8.14 -2.38 -0.02 -1.47 16 37 H 0.11 -0.91 7.83 -2.39 -0.02 -0.93 16 38 H 0.10 -0.49 7.18 -2.39 -0.02 -0.51 16 39 H 0.09 -0.60 8.14 -2.39 -0.02 -0.62 16 40 H 0.19 -1.39 5.85 -2.91 -0.02 -1.40 16 41 H 0.13 0.23 6.07 -2.38 -0.01 0.21 16 42 H 0.38 -1.90 8.70 -74.06 -0.64 -2.54 16 43 H -0.30 -0.76 7.11 99.48 0.71 -0.05 16 44 H -0.25 1.77 6.68 99.48 0.66 2.44 16 45 H 0.19 -1.96 3.09 -2.91 -0.01 -1.97 16 Total: 0.00 -31.36 394.72 3.42 -27.94 By element: Atomic # 1 Polarization: -23.67 SS G_CDS: -0.32 Total: -23.99 kcal Atomic # 6 Polarization: 1.47 SS G_CDS: 3.94 Total: 5.41 kcal Atomic # 7 Polarization: 6.56 SS G_CDS: -2.52 Total: 4.04 kcal Atomic # 8 Polarization: -10.35 SS G_CDS: -2.01 Total: -12.36 kcal Atomic # 9 Polarization: -0.66 SS G_CDS: 2.26 Total: 1.60 kcal Atomic # 14 Polarization: -4.70 SS G_CDS: 2.07 Total: -2.63 kcal Total: -31.36 3.42 -27.94 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_15744634_4549636.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -188.369 kcal (2) G-P(sol) polarization free energy of solvation -31.357 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -219.726 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 3.419 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -27.938 kcal (6) G-S(sol) free energy of system = (1) + (5) -216.307 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.23 seconds