Wall clock time and date at job start Tue Mar 9 2021 12:51:58 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42900 * 1 3 3 C 1.35977 * 117.00074 * 2 1 4 4 C 1.38673 * 120.00297 * 179.97438 * 3 2 1 5 5 C 1.38153 * 120.00488 * 180.02562 * 4 3 2 6 6 C 1.50696 * 120.00183 * 180.02562 * 5 4 3 7 7 O 1.42894 * 109.46985 * 104.98187 * 6 5 4 8 8 Si 1.86295 * 109.47136 * 344.97779 * 6 5 4 9 9 C 1.38677 * 119.99513 * 0.02562 * 5 4 3 10 10 O 1.35993 * 119.99954 * 179.97438 * 9 5 4 11 11 C 1.42891 * 116.99746 * 179.97438 * 10 9 5 12 12 C 1.50703 * 109.46713 * 180.02562 * 11 10 9 13 13 O 1.21283 * 120.00035 * 0.02562 * 12 11 10 14 14 N 1.34780 * 120.00226 * 179.97438 * 12 11 10 15 15 C 1.46500 * 120.00336 * 180.02562 * 14 12 11 16 16 H 1.09002 * 112.84805 * 336.19915 * 15 14 12 17 17 C 1.53952 * 113.53653 * 107.51014 * 15 14 12 18 18 C 1.53780 * 87.02060 * 89.18927 * 17 15 14 19 19 H 1.08999 * 113.61248 * 270.76790 * 18 17 15 20 20 C 1.52997 * 113.61363 * 139.95315 * 18 17 15 21 21 F 1.39905 * 109.47157 * 320.86142 * 20 18 17 22 22 F 1.39900 * 109.47010 * 200.86533 * 20 18 17 23 23 F 1.39897 * 109.47422 * 80.86225 * 20 18 17 24 24 C 1.53779 * 113.61321 * 205.00483 * 15 14 12 25 25 C 1.38720 * 120.00314 * 0.27206 * 9 5 4 26 26 C 1.38110 * 119.99449 * 359.45077 * 25 9 5 27 27 H 1.09000 * 109.46819 * 60.00546 * 1 2 3 28 28 H 1.08998 * 109.47401 * 179.97438 * 1 2 3 29 29 H 1.08997 * 109.47685 * 300.00134 * 1 2 3 30 30 H 1.07997 * 119.99654 * 0.04545 * 4 3 2 31 31 H 1.09003 * 109.47246 * 224.97726 * 6 5 4 32 32 H 0.96701 * 114.00322 * 60.00360 * 7 6 5 33 33 H 1.48494 * 110.00236 * 300.00067 * 8 6 5 34 34 H 1.48504 * 110.00024 * 61.32086 * 8 6 5 35 35 H 1.08999 * 109.47292 * 60.00382 * 11 10 9 36 36 H 1.08998 * 109.47535 * 299.99801 * 11 10 9 37 37 H 0.97007 * 119.99525 * 0.02562 * 14 12 11 38 38 H 1.09004 * 113.66661 * 334.65919 * 17 15 14 39 39 H 1.09002 * 113.61097 * 203.71430 * 17 15 14 40 40 H 1.09005 * 113.61038 * 156.33771 * 24 15 14 41 41 H 1.08990 * 113.69345 * 25.44435 * 24 15 14 42 42 H 1.08004 * 120.00107 * 179.69919 * 25 9 5 43 43 H 1.08004 * 119.99478 * 180.25031 * 26 25 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0463 1.2116 0.0000 4 6 3.4312 1.2842 0.0005 5 6 4.0584 2.5151 0.0011 6 6 5.5633 2.5940 0.0011 7 8 6.0207 2.9673 -1.3002 8 14 6.2722 0.9322 0.4556 9 6 3.3031 3.6781 0.0016 10 8 3.9204 4.8899 0.0027 11 6 3.0805 6.0458 0.0026 12 6 3.9347 7.2874 0.0032 13 8 5.1437 7.1916 0.0032 14 7 3.3551 8.5042 0.0027 15 6 4.1855 9.7111 0.0028 16 1 5.1824 9.5390 0.4085 17 6 4.1845 10.4580 -1.3434 18 6 2.9645 11.2344 -0.8204 19 1 2.0122 10.7541 -1.0450 20 6 2.9811 12.7202 -1.1853 21 9 4.2864 13.2122 -1.0779 22 9 2.1442 13.4240 -0.3127 23 9 2.5280 12.8829 -2.4988 24 6 3.4823 10.9425 0.5978 25 6 1.9178 3.6056 0.0073 26 6 1.2909 2.3750 0.0010 27 1 -0.3633 0.5138 -0.8900 28 1 -0.3634 -1.0276 -0.0005 29 1 -0.3634 0.5138 0.8899 30 1 4.0193 0.3784 0.0002 31 1 5.8882 3.3386 0.7278 32 1 5.6901 3.8243 -1.6025 33 1 5.8040 0.5326 1.8069 34 1 5.8628 -0.0856 -0.5453 35 1 2.4506 6.0373 0.8921 36 1 2.4519 6.0382 -0.8878 37 1 2.3880 8.5807 0.0024 38 1 3.9620 9.8192 -2.1981 39 1 5.0655 11.0812 -1.4976 40 1 4.1710 11.6985 0.9754 41 1 2.6937 10.6957 1.3084 42 1 1.3296 4.5114 0.0126 43 1 0.2123 2.3185 0.0013 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_15744634_4974302.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:51:58 Heat of formation + Delta-G solvation = -230.988025 kcal Electronic energy + Delta-G solvation = -32282.531310 eV Core-core repulsion = 27074.596176 eV Total energy + Delta-G solvation = -5207.935134 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 362.122 amu Computer time = 0.90 seconds Orbital eigenvalues (eV) -51.09596 -48.62145 -48.58759 -41.94367 -41.31441 -40.22611 -39.29434 -38.10557 -36.99353 -34.64727 -32.92001 -31.21025 -29.91077 -28.53062 -28.00757 -26.95006 -26.63812 -24.44812 -23.69516 -22.50199 -22.01556 -20.83112 -19.63562 -19.50575 -19.36133 -18.96143 -18.70314 -18.41154 -18.04720 -17.53192 -17.43084 -17.01714 -16.74931 -16.12650 -16.00439 -15.78881 -15.61395 -15.52066 -15.45135 -15.29978 -15.03505 -14.98703 -14.79439 -14.76806 -14.67813 -14.24356 -14.15219 -13.99121 -13.75880 -13.59234 -13.57595 -13.45612 -13.10861 -12.58479 -12.36792 -12.32277 -12.22587 -11.90534 -11.64382 -11.54109 -11.30076 -11.12404 -11.03128 -10.26482 -10.23875 -8.93859 -4.86696 -0.07190 0.21129 1.31805 1.36711 1.40115 1.59133 1.79670 1.89951 2.22159 2.42224 2.49289 2.73005 2.80914 2.98169 3.39289 3.40884 3.47049 3.55231 3.62633 3.70412 3.83425 3.91574 3.97219 3.98733 4.03792 4.08304 4.12655 4.27217 4.32957 4.33693 4.42821 4.56474 4.58763 4.63496 4.67440 4.75862 4.85729 4.87306 4.91892 5.00302 5.07512 5.28928 5.40032 6.05388 6.29842 6.40618 6.54990 7.08862 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.017 3.983 2 O -0.342 6.342 3 C 0.087 3.913 4 C -0.143 4.143 5 C -0.119 4.119 6 C -0.084 4.084 7 O -0.545 6.545 8 Si 0.810 3.190 9 C 0.099 3.901 10 O -0.310 6.310 11 C 0.035 3.965 12 C 0.519 3.481 13 O -0.563 6.563 14 N -0.694 5.694 15 C 0.126 3.874 16 H 0.097 0.903 17 C -0.141 4.141 18 C -0.157 4.157 19 H 0.160 0.840 20 C 0.453 3.547 21 F -0.190 7.190 22 F -0.190 7.190 23 F -0.194 7.194 24 C -0.122 4.122 25 C -0.154 4.154 26 C -0.159 4.159 27 H 0.069 0.931 28 H 0.113 0.887 29 H 0.070 0.930 30 H 0.123 0.877 31 H 0.080 0.920 32 H 0.372 0.628 33 H -0.267 1.267 34 H -0.288 1.288 35 H 0.127 0.873 36 H 0.128 0.872 37 H 0.423 0.577 38 H 0.090 0.910 39 H 0.101 0.899 40 H 0.106 0.894 41 H 0.112 0.888 42 H 0.177 0.823 43 H 0.165 0.835 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.817 1.790 2.138 8.299 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.077 4.077 2 O -0.257 6.257 3 C 0.042 3.958 4 C -0.161 4.161 5 C -0.120 4.120 6 C -0.191 4.191 7 O -0.351 6.351 8 Si 0.712 3.288 9 C 0.054 3.946 10 O -0.223 6.223 11 C -0.043 4.043 12 C 0.305 3.695 13 O -0.440 6.440 14 N -0.348 5.348 15 C 0.021 3.979 16 H 0.115 0.885 17 C -0.180 4.180 18 C -0.176 4.176 19 H 0.177 0.823 20 C 0.399 3.601 21 F -0.172 7.172 22 F -0.171 7.171 23 F -0.175 7.175 24 C -0.160 4.160 25 C -0.172 4.172 26 C -0.178 4.178 27 H 0.088 0.912 28 H 0.132 0.868 29 H 0.089 0.911 30 H 0.140 0.860 31 H 0.098 0.902 32 H 0.221 0.779 33 H -0.193 1.193 34 H -0.215 1.215 35 H 0.144 0.856 36 H 0.145 0.855 37 H 0.261 0.739 38 H 0.109 0.891 39 H 0.119 0.881 40 H 0.125 0.875 41 H 0.131 0.869 42 H 0.194 0.806 43 H 0.183 0.817 Dipole moment (debyes) X Y Z Total from point charges -6.548 0.237 2.392 6.975 hybrid contribution -2.032 1.556 -0.482 2.605 sum -8.580 1.793 1.910 8.971 Atomic orbital electron populations 1.23383 0.75981 1.05692 1.02641 1.86079 1.23858 1.26732 1.89018 1.18998 0.91716 0.85650 0.99399 1.20158 0.92872 0.96919 1.06186 1.19553 0.96832 0.90608 1.04992 1.25344 0.91120 1.14086 0.88599 1.86658 1.73918 1.42301 1.32199 0.92502 0.90040 0.69956 0.76352 1.18662 0.91513 0.84253 1.00200 1.86089 1.35343 1.11637 1.89260 1.22768 0.92688 0.81731 1.07109 1.20450 0.88321 0.85234 0.75472 1.90795 1.16561 1.87200 1.49415 1.45310 1.11144 1.03464 1.74890 1.21678 0.96167 0.83688 0.96412 0.88487 1.23553 0.96949 0.98541 0.98951 1.24230 1.04681 0.87396 1.01282 0.82285 1.20863 0.72895 0.92335 0.74015 1.93160 1.38236 1.90016 1.95769 1.93186 1.72193 1.82051 1.69671 1.93182 1.89152 1.96704 1.38489 1.23346 1.01559 0.96857 0.94235 1.21477 0.92134 1.00016 1.03555 1.21441 1.01679 0.90733 1.03929 0.91203 0.86827 0.91103 0.85976 0.90207 0.77928 1.19302 1.21522 0.85581 0.85467 0.73857 0.89129 0.88092 0.87525 0.86928 0.80603 0.81715 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.07 9.81 113.37 1.11 1.04 16 2 O -0.34 -1.97 10.50 -93.30 -0.98 -2.95 16 3 C 0.09 0.50 6.68 22.49 0.15 0.65 16 4 C -0.14 -1.29 8.59 22.35 0.19 -1.10 16 5 C -0.12 -0.88 5.27 -19.78 -0.10 -0.98 16 6 C -0.08 -0.60 2.33 71.23 0.17 -0.43 16 7 O -0.54 -4.80 12.65 -148.98 -1.89 -6.69 16 8 Si 0.81 4.12 30.40 68.60 2.09 6.20 16 9 C 0.10 0.26 6.62 22.49 0.15 0.41 16 10 O -0.31 -0.56 8.56 -74.43 -0.64 -1.20 16 11 C 0.03 -0.27 5.22 71.24 0.37 0.10 16 12 C 0.52 -1.37 7.91 87.66 0.69 -0.68 16 13 O -0.56 -5.03 16.10 16.00 0.26 -4.78 16 14 N -0.69 6.83 5.26 -439.75 -2.31 4.52 16 15 C 0.13 -0.89 4.33 45.58 0.20 -0.69 16 16 H 0.10 -0.18 7.46 -2.39 -0.02 -0.20 16 17 C -0.14 0.96 7.33 31.18 0.23 1.19 16 18 C -0.16 1.43 3.67 -10.27 -0.04 1.39 16 19 H 0.16 -2.30 8.14 -2.39 -0.02 -2.32 16 20 C 0.45 -0.98 3.01 71.98 0.22 -0.76 16 21 F -0.19 -0.17 15.74 44.97 0.71 0.54 16 22 F -0.19 -0.01 17.20 44.97 0.77 0.77 16 23 F -0.19 -0.24 17.32 44.97 0.78 0.54 16 24 C -0.12 1.25 7.20 31.12 0.22 1.47 16 25 C -0.15 0.48 9.03 22.35 0.20 0.69 16 26 C -0.16 0.18 9.03 22.35 0.20 0.38 16 27 H 0.07 -0.47 7.66 -2.39 -0.02 -0.49 16 28 H 0.11 -0.74 8.14 -2.39 -0.02 -0.76 16 29 H 0.07 -0.49 7.66 -2.39 -0.02 -0.51 16 30 H 0.12 1.32 4.93 -2.91 -0.01 1.30 16 31 H 0.08 0.52 7.82 -2.39 -0.02 0.50 16 32 H 0.37 2.18 8.60 -74.06 -0.64 1.54 16 33 H -0.27 -2.04 7.11 99.48 0.71 -1.33 16 34 H -0.29 -3.11 6.81 99.48 0.68 -2.44 16 35 H 0.13 -1.76 7.65 -2.39 -0.02 -1.78 16 36 H 0.13 -1.80 7.67 -2.39 -0.02 -1.82 16 37 H 0.42 -7.48 8.70 -92.70 -0.81 -8.28 16 38 H 0.09 -0.61 8.14 -2.39 -0.02 -0.63 16 39 H 0.10 -0.48 7.18 -2.39 -0.02 -0.50 16 40 H 0.11 -0.93 7.83 -2.38 -0.02 -0.95 16 41 H 0.11 -1.55 8.14 -2.39 -0.02 -1.57 16 42 H 0.18 -2.15 6.29 -2.91 -0.02 -2.17 16 43 H 0.17 -1.23 6.29 -2.91 -0.02 -1.25 16 Total: 0.00 -26.44 372.02 2.42 -24.02 By element: Atomic # 1 Polarization: -23.34 SS G_CDS: -0.33 Total: -23.67 kcal Atomic # 6 Polarization: -1.27 SS G_CDS: 3.96 Total: 2.69 kcal Atomic # 7 Polarization: 6.83 SS G_CDS: -2.31 Total: 4.52 kcal Atomic # 8 Polarization: -12.37 SS G_CDS: -3.24 Total: -15.61 kcal Atomic # 9 Polarization: -0.41 SS G_CDS: 2.26 Total: 1.85 kcal Atomic # 14 Polarization: 4.12 SS G_CDS: 2.09 Total: 6.20 kcal Total: -26.44 2.42 -24.02 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_15744634_4974302.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -206.967 kcal (2) G-P(sol) polarization free energy of solvation -26.439 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -233.405 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.417 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.022 kcal (6) G-S(sol) free energy of system = (1) + (5) -230.988 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.90 seconds