Wall clock time and date at job start Tue Mar 9 2021 12:52:35 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42907 * 1 3 3 Si 1.86295 * 109.47174 * 2 1 4 4 C 1.50701 * 109.47337 * 120.00034 * 2 1 3 5 5 C 1.34228 * 126.50274 * 255.35809 * 4 2 1 6 6 N 1.36828 * 109.94134 * 180.13067 * 5 4 2 7 7 C 1.46501 * 125.06802 * 179.81278 * 6 5 4 8 8 C 1.50695 * 109.47376 * 264.70306 * 7 6 5 9 9 O 1.21282 * 119.99917 * 359.97438 * 8 7 6 10 10 N 1.34772 * 120.00305 * 179.97438 * 8 7 6 11 11 C 1.46506 * 120.00033 * 179.97438 * 10 8 7 12 12 H 1.08992 * 112.90684 * 336.24748 * 11 10 8 13 13 C 1.54049 * 113.61276 * 107.61836 * 11 10 8 14 14 C 1.53781 * 87.08031 * 89.07129 * 13 11 10 15 15 H 1.08999 * 113.61181 * 270.87794 * 14 13 11 16 16 C 1.52991 * 113.61611 * 139.97702 * 14 13 11 17 17 F 1.39901 * 109.47365 * 322.50364 * 16 14 13 18 18 F 1.39902 * 109.47259 * 82.50273 * 16 14 13 19 19 F 1.39900 * 109.47459 * 202.50218 * 16 14 13 20 20 C 1.53781 * 87.08070 * 25.42738 * 14 13 11 21 21 C 1.37695 * 109.87020 * 359.55259 * 6 5 4 22 22 C 1.39086 * 133.51236 * 180.28700 * 21 6 5 23 23 C 1.37784 * 119.77752 * 179.97438 * 22 21 6 24 24 C 1.38795 * 120.66798 * 0.02562 * 23 22 21 25 25 C 1.36651 * 120.52630 * 0.02562 * 24 23 22 26 26 C 1.39595 * 119.76494 * 359.95178 * 25 24 23 27 27 H 0.96695 * 113.99800 * 300.00042 * 1 2 3 28 28 H 1.09003 * 109.46939 * 240.00213 * 2 1 3 29 29 H 1.48496 * 110.00283 * 178.68113 * 3 2 1 30 30 H 1.48503 * 110.00316 * 300.00430 * 3 2 1 31 31 H 1.08004 * 125.02960 * 359.97075 * 5 4 2 32 32 H 1.08997 * 109.47520 * 144.69557 * 7 6 5 33 33 H 1.09001 * 109.46568 * 24.69677 * 7 6 5 34 34 H 0.97002 * 120.00078 * 359.97438 * 10 8 7 35 35 H 1.09005 * 113.62125 * 334.52173 * 13 11 10 36 36 H 1.08996 * 113.68970 * 203.62749 * 13 11 10 37 37 H 1.09002 * 113.61445 * 89.11830 * 20 14 13 38 38 H 1.09002 * 113.61408 * 219.93560 * 20 14 13 39 39 H 1.08003 * 120.11318 * 359.94239 * 22 21 6 40 40 H 1.08008 * 119.66517 * 179.97438 * 23 22 21 41 41 H 1.08001 * 119.73511 * 179.97438 * 24 23 22 42 42 H 1.08001 * 120.12103 * 179.97438 * 25 24 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9315 -0.7104 1.2304 5 6 2.4548 -0.1373 2.3256 6 7 2.8017 -1.0989 3.2350 7 6 3.4057 -0.8404 4.5445 8 6 4.9040 -0.9625 4.4395 9 8 5.4169 -1.2388 3.3758 10 7 5.6742 -0.7646 5.5277 11 6 7.1308 -0.8839 5.4257 12 1 7.4478 -1.5108 4.5924 13 6 7.8672 0.4672 5.4992 14 6 7.9038 0.2749 7.0246 15 1 7.0310 0.6800 7.5367 16 6 9.2240 0.7072 7.6653 17 9 10.2857 0.3697 6.8190 18 9 9.2123 2.0912 7.8694 19 9 9.3816 0.0561 8.8935 20 6 7.8146 -1.2368 6.7572 21 6 2.4932 -2.3457 2.7386 22 6 2.6277 -3.6361 3.2396 23 6 2.2142 -4.7106 2.4828 24 6 1.6642 -4.5193 1.2229 25 6 1.5237 -3.2602 0.7108 26 6 1.9356 -2.1571 1.4606 27 1 -0.3933 0.4417 0.7650 28 1 1.7924 -0.5138 -0.8900 29 1 3.5346 1.7703 0.0321 30 1 1.5615 2.4680 -1.2084 31 1 2.5853 0.9255 2.4669 32 1 3.0317 -1.5659 5.2668 33 1 3.1453 0.1661 4.8722 34 1 5.2641 -0.5432 6.3784 35 1 7.2593 1.3139 5.1803 36 1 8.8528 0.4546 5.0339 37 1 8.7857 -1.7167 6.6356 38 1 7.1654 -1.7661 7.4547 39 1 3.0554 -3.7955 4.2185 40 1 2.3199 -5.7120 2.8735 41 1 1.3454 -5.3724 0.6424 42 1 1.0953 -3.1189 -0.2705 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_15744634_9818708.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:52:35 Heat of formation + Delta-G solvation = -119.958053 kcal Electronic energy + Delta-G solvation = -31189.554053 eV Core-core repulsion = 26301.919732 eV Total energy + Delta-G solvation = -4887.634321 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 355.118 amu Computer time = 0.82 seconds Orbital eigenvalues (eV) -51.10407 -48.63343 -48.59162 -42.53111 -41.23631 -39.43930 -38.08264 -37.57051 -34.67820 -33.93638 -31.47005 -30.22641 -29.51356 -28.39844 -26.95594 -25.83470 -24.22111 -23.68763 -22.80076 -21.88887 -20.84509 -20.62253 -19.52592 -19.36769 -18.89724 -18.53011 -18.18976 -17.70812 -17.28016 -16.83253 -16.42437 -16.30057 -16.04537 -15.83210 -15.52457 -15.42829 -15.38231 -15.04744 -14.96162 -14.90995 -14.77890 -14.77243 -14.69427 -14.44840 -14.21136 -14.06528 -13.80540 -13.61018 -13.59274 -13.10788 -12.70958 -12.58121 -12.34265 -12.26160 -12.11761 -11.90301 -11.81528 -11.65701 -11.18597 -10.54993 -10.30449 -10.24186 -9.15164 -8.61891 -5.05375 0.14807 0.63300 1.34525 1.41511 1.43543 1.64614 1.75896 1.78985 2.00754 2.15048 2.71869 2.80389 2.94688 2.97583 3.39867 3.51630 3.58766 3.65928 3.69067 3.72667 3.75958 3.89587 3.96000 4.06516 4.19602 4.22220 4.30763 4.41700 4.48628 4.56584 4.56654 4.62359 4.72233 4.75183 4.79252 4.84125 4.88599 4.92016 5.13801 5.41179 5.50730 5.66185 5.73338 5.75670 6.20322 6.23932 6.46220 6.89862 7.12582 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.561 6.561 2 C -0.042 4.042 3 Si 0.803 3.197 4 C -0.226 4.226 5 C 0.081 3.919 6 N -0.467 5.467 7 C 0.088 3.912 8 C 0.495 3.505 9 O -0.571 6.571 10 N -0.693 5.693 11 C 0.126 3.874 12 H 0.089 0.911 13 C -0.141 4.141 14 C -0.154 4.154 15 H 0.162 0.838 16 C 0.452 3.548 17 F -0.192 7.192 18 F -0.193 7.193 19 F -0.189 7.189 20 C -0.123 4.123 21 C 0.092 3.908 22 C -0.132 4.132 23 C -0.109 4.109 24 C -0.155 4.155 25 C -0.093 4.093 26 C -0.118 4.118 27 H 0.393 0.607 28 H 0.087 0.913 29 H -0.294 1.294 30 H -0.300 1.300 31 H 0.210 0.790 32 H 0.147 0.853 33 H 0.171 0.829 34 H 0.424 0.576 35 H 0.092 0.908 36 H 0.096 0.904 37 H 0.102 0.898 38 H 0.113 0.887 39 H 0.136 0.864 40 H 0.145 0.855 41 H 0.134 0.866 42 H 0.114 0.886 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.158 2.594 9.003 9.887 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.368 6.368 2 C -0.151 4.151 3 Si 0.709 3.291 4 C -0.234 4.234 5 C -0.044 4.044 6 N -0.149 5.149 7 C -0.036 4.036 8 C 0.281 3.719 9 O -0.449 6.449 10 N -0.347 5.347 11 C 0.019 3.981 12 H 0.107 0.893 13 C -0.180 4.180 14 C -0.173 4.173 15 H 0.180 0.820 16 C 0.398 3.602 17 F -0.173 7.173 18 F -0.174 7.174 19 F -0.171 7.171 20 C -0.161 4.161 21 C -0.013 4.013 22 C -0.152 4.152 23 C -0.129 4.129 24 C -0.173 4.173 25 C -0.111 4.111 26 C -0.123 4.123 27 H 0.243 0.757 28 H 0.104 0.896 29 H -0.222 1.222 30 H -0.228 1.228 31 H 0.226 0.774 32 H 0.164 0.836 33 H 0.189 0.811 34 H 0.263 0.737 35 H 0.111 0.889 36 H 0.115 0.885 37 H 0.120 0.880 38 H 0.131 0.869 39 H 0.154 0.846 40 H 0.163 0.837 41 H 0.152 0.848 42 H 0.132 0.868 Dipole moment (debyes) X Y Z Total from point charges -2.071 2.760 7.613 8.358 hybrid contribution 0.647 -0.645 -0.162 0.928 sum -1.425 2.115 7.451 7.875 Atomic orbital electron populations 1.86455 1.17771 1.82388 1.50223 1.24582 0.84704 1.10414 0.95419 0.94155 0.76620 0.73410 0.84963 1.20781 1.12120 0.91872 0.98598 1.22074 0.98650 0.95373 0.88312 1.43444 1.51901 1.03696 1.15863 1.22035 0.88090 1.09602 0.83881 1.21549 0.90747 0.75884 0.83769 1.90828 1.75759 1.48199 1.30102 1.45446 1.05441 1.71184 1.12666 1.21634 0.80267 0.97025 0.99139 0.89279 1.23552 1.02764 0.99463 0.92173 1.24211 0.93909 1.00824 0.98381 0.81993 1.20874 0.88356 0.74482 0.76438 1.93156 1.60920 1.92149 1.71113 1.93184 1.96959 1.32154 1.95142 1.93187 1.96483 1.81296 1.46119 1.23333 1.03221 0.92890 0.96658 1.18371 1.01516 0.87144 0.94313 1.20261 1.04445 0.89028 1.01474 1.21132 0.98297 0.99131 0.94291 1.20905 1.02435 0.96931 0.97077 1.20440 0.99382 0.91915 0.99386 1.19379 1.04037 0.93915 0.94947 0.75680 0.89590 1.22161 1.22750 0.77388 0.83557 0.81118 0.73717 0.88921 0.88526 0.87961 0.86900 0.84607 0.83707 0.84812 0.86756 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -2.08 12.88 -148.98 -1.92 -4.00 16 2 C -0.04 -0.15 3.06 71.24 0.22 0.06 16 3 Si 0.80 -0.84 30.76 68.60 2.11 1.27 16 4 C -0.23 -1.08 5.57 -18.63 -0.10 -1.18 16 5 C 0.08 -0.10 9.89 83.00 0.82 0.73 16 6 N -0.47 0.34 2.27 -520.01 -1.18 -0.84 16 7 C 0.09 -0.94 6.48 85.63 0.56 -0.39 16 8 C 0.49 -2.17 7.90 87.66 0.69 -1.48 16 9 O -0.57 -4.86 16.02 -3.04 -0.05 -4.91 16 10 N -0.69 7.69 5.26 -439.60 -2.31 5.37 16 11 C 0.13 -0.90 4.34 45.61 0.20 -0.70 16 12 H 0.09 -0.07 7.47 -2.39 -0.02 -0.09 16 13 C -0.14 1.00 7.33 31.21 0.23 1.23 16 14 C -0.15 1.47 3.69 -10.27 -0.04 1.43 16 15 H 0.16 -2.48 8.14 -2.39 -0.02 -2.50 16 16 C 0.45 -1.07 3.02 71.98 0.22 -0.85 16 17 F -0.19 -0.20 15.75 44.97 0.71 0.50 16 18 F -0.19 -0.14 17.32 44.97 0.78 0.64 16 19 F -0.19 0.02 17.18 44.97 0.77 0.79 16 20 C -0.12 1.25 7.17 31.12 0.22 1.48 16 21 C 0.09 0.54 6.80 39.03 0.27 0.80 16 22 C -0.13 -0.52 10.00 22.37 0.22 -0.30 16 23 C -0.11 -0.48 10.01 22.30 0.22 -0.26 16 24 C -0.15 -1.04 9.97 22.03 0.22 -0.82 16 25 C -0.09 -0.91 10.05 22.23 0.22 -0.69 16 26 C -0.12 -1.12 6.35 -20.20 -0.13 -1.25 16 27 H 0.39 -2.21 8.70 -74.06 -0.64 -2.85 16 28 H 0.09 0.65 7.96 -2.39 -0.02 0.64 16 29 H -0.29 -1.56 7.11 99.48 0.71 -0.85 16 30 H -0.30 -1.89 7.11 99.48 0.71 -1.18 16 31 H 0.21 -2.14 6.35 -2.91 -0.02 -2.16 16 32 H 0.15 -2.31 8.14 -2.39 -0.02 -2.33 16 33 H 0.17 -3.39 8.12 -2.39 -0.02 -3.41 16 34 H 0.42 -8.13 8.70 -92.71 -0.81 -8.94 16 35 H 0.09 -0.71 8.14 -2.38 -0.02 -0.73 16 36 H 0.10 -0.42 7.13 -2.39 -0.02 -0.44 16 37 H 0.10 -0.83 7.88 -2.39 -0.02 -0.85 16 38 H 0.11 -1.56 8.14 -2.39 -0.02 -1.58 16 39 H 0.14 -0.20 8.06 -2.91 -0.02 -0.23 16 40 H 0.15 -0.11 8.06 -2.91 -0.02 -0.13 16 41 H 0.13 0.39 8.06 -2.91 -0.02 0.37 16 42 H 0.11 1.08 8.06 -2.91 -0.02 1.05 16 Total: 0.00 -32.22 370.39 2.63 -29.60 By element: Atomic # 1 Polarization: -25.91 SS G_CDS: -0.32 Total: -26.23 kcal Atomic # 6 Polarization: -6.23 SS G_CDS: 4.04 Total: -2.19 kcal Atomic # 7 Polarization: 8.03 SS G_CDS: -3.49 Total: 4.54 kcal Atomic # 8 Polarization: -6.94 SS G_CDS: -1.97 Total: -8.91 kcal Atomic # 9 Polarization: -0.33 SS G_CDS: 2.26 Total: 1.93 kcal Atomic # 14 Polarization: -0.84 SS G_CDS: 2.11 Total: 1.27 kcal Total: -32.22 2.63 -29.60 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_15744634_9818708.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -90.361 kcal (2) G-P(sol) polarization free energy of solvation -32.224 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -122.585 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.627 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -29.597 kcal (6) G-S(sol) free energy of system = (1) + (5) -119.958 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.82 seconds