Wall clock time and date at job start Tue Mar 9 2021 12:57:37 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50695 * 1 3 3 C 1.35445 * 125.56928 * 2 1 4 4 C 1.50697 * 126.06882 * 359.97438 * 3 2 1 5 5 O 1.42905 * 109.47199 * 128.16037 * 4 3 2 6 6 Si 1.86294 * 109.47520 * 248.16509 * 4 3 2 7 7 H 1.48506 * 109.46930 * 294.39306 * 6 4 3 8 8 H 1.48501 * 109.47079 * 54.39156 * 6 4 3 9 9 H 1.48503 * 109.47418 * 174.39196 * 6 4 3 10 10 C 1.39842 * 107.86822 * 179.73542 * 3 2 1 11 11 C 1.50698 * 126.45871 * 180.24543 * 10 3 2 12 12 C 1.37877 * 107.08122 * 0.25943 * 10 3 2 13 13 C 1.46677 * 126.22970 * 179.97438 * 12 10 3 14 14 O 1.21701 * 119.99473 * 254.04215 * 13 12 10 15 15 N 1.34772 * 120.00285 * 74.04265 * 13 12 10 16 16 C 1.46339 * 120.53415 * 5.02744 * 15 13 12 17 17 C 1.52509 * 111.69003 * 109.10803 * 16 15 13 18 18 C 1.53648 * 110.12143 * 71.27040 * 17 16 15 19 19 Si 1.87464 * 107.32132 * 299.66063 * 18 17 16 20 20 C 1.86304 * 110.01036 * 165.98522 * 19 18 17 21 21 C 1.86300 * 110.01378 * 287.41551 * 19 18 17 22 22 C 1.47792 * 120.53416 * 184.75519 * 15 13 12 23 23 N 1.35540 * 125.56026 * 180.18584 * 2 1 3 24 24 H 1.09004 * 109.47107 * 94.73423 * 1 2 3 25 25 H 1.08991 * 109.47651 * 214.74314 * 1 2 3 26 26 H 1.09004 * 109.46718 * 334.74320 * 1 2 3 27 27 H 1.09008 * 109.46980 * 8.16716 * 4 3 2 28 28 H 0.96701 * 113.99821 * 60.00672 * 5 4 3 29 29 H 1.08994 * 109.47511 * 95.54795 * 11 10 3 30 30 H 1.09005 * 109.46839 * 215.54502 * 11 10 3 31 31 H 1.08999 * 109.47102 * 335.54211 * 11 10 3 32 32 H 1.08994 * 109.03807 * 229.68004 * 16 15 13 33 33 H 1.09004 * 109.03463 * 348.54408 * 16 15 13 34 34 H 1.09000 * 109.36122 * 191.47150 * 17 16 15 35 35 H 1.08997 * 109.36499 * 311.07113 * 17 16 15 36 36 H 1.09002 * 109.88368 * 59.11452 * 18 17 16 37 37 H 1.08997 * 109.88391 * 180.13051 * 18 17 16 38 38 H 1.08994 * 109.47461 * 59.99842 * 20 19 18 39 39 H 1.09006 * 109.46938 * 180.02562 * 20 19 18 40 40 H 1.09002 * 109.46842 * 299.99425 * 20 19 18 41 41 H 1.08992 * 109.47326 * 60.00515 * 21 19 18 42 42 H 1.08998 * 109.46765 * 180.02562 * 21 19 18 43 43 H 1.09000 * 109.46793 * 299.99955 * 21 19 18 44 44 H 1.09003 * 110.07910 * 353.93192 * 22 15 13 45 45 H 1.09005 * 110.08091 * 115.53453 * 22 15 13 46 46 H 0.96999 * 125.67701 * 0.02562 * 23 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2948 1.1017 0.0000 4 6 1.8201 2.5320 -0.0005 5 8 2.4597 3.2466 1.0589 6 14 2.2450 3.3268 -1.6309 7 1 3.7210 3.4161 -1.7683 8 1 1.6934 2.5074 -2.7398 9 1 1.6595 4.6905 -1.6845 10 6 3.6270 0.6765 0.0061 11 6 4.8486 1.5589 0.0136 12 6 3.6121 -0.7021 0.0038 13 6 4.7858 -1.5818 0.0079 14 8 5.1037 -2.1769 -1.0050 15 7 5.5123 -1.7310 1.1332 16 6 5.0798 -1.1091 2.3853 17 6 4.5855 -2.1461 3.3884 18 6 5.7682 -2.9646 3.9287 19 14 6.5690 -3.8208 2.4658 20 6 8.2406 -4.4843 2.9523 21 6 5.4805 -5.2080 1.8647 22 6 6.7554 -2.5303 1.1240 23 7 2.2952 -1.1026 -0.0036 24 1 -0.3633 -0.0848 -1.0242 25 1 -0.3634 -0.8443 0.5856 26 1 -0.3633 0.9295 0.4385 27 1 0.7401 2.5564 0.1451 28 1 3.4243 3.2662 0.9938 29 1 5.1962 1.6897 1.0383 30 1 5.6358 1.0946 -0.5806 31 1 4.5976 2.5306 -0.4118 32 1 5.9182 -0.5651 2.8203 33 1 4.2735 -0.4068 2.1735 34 1 4.0881 -1.6401 4.2158 35 1 3.8775 -2.8144 2.8982 36 1 6.4878 -2.3026 4.4104 37 1 5.4104 -3.7058 4.6432 38 1 8.1247 -5.1994 3.7667 39 1 8.6982 -4.9796 2.0958 40 1 8.8770 -3.6618 3.2787 41 1 4.5145 -4.8058 1.5597 42 1 5.9544 -5.6996 1.0151 43 1 5.3360 -5.9306 2.6679 44 1 6.8813 -3.0152 0.1560 45 1 7.6125 -1.8918 1.3383 46 1 1.9832 -2.0211 -0.0069 RHF calculation, no. of doubly occupied orbitals= 56 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_15766672_12297754.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:57:37 Heat of formation + Delta-G solvation = -68.064492 kcal Electronic energy + Delta-G solvation = -25232.328629 eV Core-core repulsion = 21859.778208 eV Total energy + Delta-G solvation = -3372.550421 eV No. of doubly occupied orbitals = 56 Molecular weight (most abundant/longest-lived isotopes) = 310.163 amu Computer time = 0.62 seconds Orbital eigenvalues (eV) -42.70740 -40.49410 -37.77680 -37.49405 -33.95152 -33.35688 -32.91029 -29.57958 -29.31511 -28.69665 -28.42647 -27.23488 -26.54839 -25.43525 -22.81721 -21.58929 -20.65792 -19.98523 -18.58469 -17.86466 -17.71420 -17.08443 -16.31517 -15.94393 -15.66406 -15.50543 -15.07527 -14.91447 -14.56384 -14.36714 -14.21255 -14.11827 -14.06042 -13.95381 -13.87668 -13.55035 -13.51042 -13.43968 -13.24367 -13.20152 -13.13968 -13.00659 -12.60040 -12.52831 -12.13883 -12.10426 -12.06921 -11.67810 -11.48612 -11.13565 -10.84574 -10.60596 -10.37993 -9.49683 -9.40006 -8.89779 0.75136 1.11705 1.17491 1.42470 1.49418 1.66057 1.71919 1.78681 1.86754 2.04552 2.04745 2.45372 2.54318 3.49624 3.66640 3.84859 3.96151 3.98040 4.09565 4.17574 4.32858 4.47148 4.47646 4.49181 4.55665 4.63655 4.66726 4.69707 4.73404 4.77649 4.81801 4.83864 4.86928 4.94659 4.97059 5.03001 5.09204 5.16138 5.19248 5.24318 5.35872 5.44500 5.55698 5.61939 5.79253 5.92649 6.18658 6.44880 6.71165 6.94921 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.096 4.096 2 C 0.066 3.934 3 C -0.214 4.214 4 C -0.030 4.030 5 O -0.550 6.550 6 Si 0.957 3.043 7 H -0.252 1.252 8 H -0.273 1.273 9 H -0.263 1.263 10 C -0.112 4.112 11 C -0.105 4.105 12 C -0.054 4.054 13 C 0.582 3.418 14 O -0.582 6.582 15 N -0.573 5.573 16 C 0.090 3.910 17 C -0.123 4.123 18 C -0.404 4.404 19 Si 1.069 2.931 20 C -0.453 4.453 21 C -0.465 4.465 22 C -0.209 4.209 23 N -0.522 5.522 24 H 0.085 0.915 25 H 0.083 0.917 26 H 0.099 0.901 27 H 0.129 0.871 28 H 0.380 0.620 29 H 0.094 0.906 30 H 0.052 0.948 31 H 0.077 0.923 32 H 0.097 0.903 33 H 0.091 0.909 34 H 0.088 0.912 35 H 0.056 0.944 36 H 0.093 0.907 37 H 0.086 0.914 38 H 0.077 0.923 39 H 0.067 0.933 40 H 0.080 0.920 41 H 0.053 0.947 42 H 0.060 0.940 43 H 0.077 0.923 44 H 0.078 0.922 45 H 0.092 0.908 46 H 0.426 0.574 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.983 0.007 6.060 6.139 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.153 4.153 2 C -0.052 4.052 3 C -0.221 4.221 4 C -0.142 4.142 5 O -0.357 6.357 6 Si 0.783 3.217 7 H -0.176 1.176 8 H -0.198 1.198 9 H -0.188 1.188 10 C -0.120 4.120 11 C -0.162 4.162 12 C -0.168 4.168 13 C 0.369 3.631 14 O -0.462 6.462 15 N -0.303 5.303 16 C -0.032 4.032 17 C -0.161 4.161 18 C -0.491 4.491 19 Si 1.259 2.741 20 C -0.562 4.562 21 C -0.571 4.571 22 C -0.374 4.374 23 N -0.119 5.119 24 H 0.103 0.897 25 H 0.102 0.898 26 H 0.118 0.882 27 H 0.147 0.853 28 H 0.229 0.771 29 H 0.113 0.887 30 H 0.071 0.929 31 H 0.096 0.904 32 H 0.115 0.885 33 H 0.109 0.891 34 H 0.106 0.894 35 H 0.075 0.925 36 H 0.112 0.888 37 H 0.105 0.895 38 H 0.096 0.904 39 H 0.086 0.914 40 H 0.099 0.901 41 H 0.072 0.928 42 H 0.079 0.921 43 H 0.096 0.904 44 H 0.097 0.903 45 H 0.111 0.889 46 H 0.265 0.735 Dipole moment (debyes) X Y Z Total from point charges -1.232 0.017 4.892 5.044 hybrid contribution 0.397 -0.982 -0.507 1.174 sum -0.835 -0.964 4.384 4.566 Atomic orbital electron populations 1.20616 0.85339 1.05347 1.04040 1.20630 0.94753 0.84859 1.04918 1.19534 0.92320 0.95618 1.14588 1.24162 1.01387 0.88635 0.99996 1.86477 1.25051 1.75236 1.48937 0.85692 0.80947 0.78915 0.76169 1.17568 1.19813 1.18756 1.19730 0.95417 0.90766 1.06121 1.20574 0.93648 0.98391 1.03596 1.19686 0.84270 0.93703 1.19164 1.17472 0.82697 0.79865 0.83048 1.90813 1.72057 1.48967 1.34385 1.47874 1.23677 1.50323 1.08467 1.21820 1.02290 0.96160 0.82933 1.21506 0.98273 0.97845 0.98504 1.26239 1.03837 1.06602 1.12460 0.78711 0.66706 0.64012 0.64651 1.26114 1.16996 1.07165 1.05876 1.26350 1.09891 1.14660 1.06166 1.27306 0.87413 1.07067 1.15602 1.41721 1.04167 1.09277 1.56686 0.89683 0.89846 0.88217 0.85315 0.77117 0.88742 0.92905 0.90413 0.88526 0.89100 0.89370 0.92544 0.88793 0.89545 0.90351 0.91388 0.90115 0.92816 0.92073 0.90380 0.90281 0.88926 0.73533 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 0.56 10.19 71.23 0.73 1.29 16 2 C 0.07 0.03 7.13 41.34 0.29 0.33 16 3 C -0.21 -0.50 4.44 -20.12 -0.09 -0.59 16 4 C -0.03 0.00 2.84 71.23 0.20 0.20 16 5 O -0.55 -0.62 12.87 -148.98 -1.92 -2.54 16 6 Si 0.96 1.94 26.82 68.60 1.84 3.78 16 7 H -0.25 -0.65 5.78 99.48 0.57 -0.08 16 8 H -0.27 -1.47 7.11 99.48 0.71 -0.76 16 9 H -0.26 -0.94 7.11 99.48 0.71 -0.23 16 10 C -0.11 -0.45 5.06 -19.56 -0.10 -0.55 16 11 C -0.11 -0.08 8.63 71.24 0.61 0.53 16 12 C -0.05 -0.32 5.24 40.35 0.21 -0.11 16 13 C 0.58 5.19 7.29 86.45 0.63 5.82 16 14 O -0.58 -10.33 16.54 -4.35 -0.07 -10.40 16 15 N -0.57 -1.25 2.64 -630.21 -1.66 -2.91 16 16 C 0.09 -0.29 5.71 86.25 0.49 0.21 16 17 C -0.12 0.62 5.68 30.65 0.17 0.80 16 18 C -0.40 2.84 5.02 72.20 0.36 3.21 16 19 Si 1.07 -5.95 11.97 68.60 0.82 -5.13 16 20 C -0.45 2.45 8.65 113.37 0.98 3.43 16 21 C -0.47 0.29 8.65 113.37 0.98 1.27 16 22 C -0.21 -0.04 5.42 127.52 0.69 0.65 16 23 N -0.52 -0.99 6.10 -171.94 -1.05 -2.04 16 24 H 0.08 -0.57 8.14 -2.38 -0.02 -0.59 16 25 H 0.08 -0.68 8.14 -2.39 -0.02 -0.70 16 26 H 0.10 -0.77 6.80 -2.38 -0.02 -0.79 16 27 H 0.13 -0.45 6.43 -2.38 -0.02 -0.46 16 28 H 0.38 -1.30 6.21 -74.06 -0.46 -1.76 16 29 H 0.09 -0.36 8.14 -2.39 -0.02 -0.38 16 30 H 0.05 0.21 8.09 -2.38 -0.02 0.19 16 31 H 0.08 -0.07 4.11 -2.39 -0.01 -0.08 16 32 H 0.10 -0.64 8.11 -2.39 -0.02 -0.66 16 33 H 0.09 -0.17 5.69 -2.38 -0.01 -0.19 16 34 H 0.09 -0.57 8.14 -2.39 -0.02 -0.59 16 35 H 0.06 -0.19 7.90 -2.39 -0.02 -0.21 16 36 H 0.09 -0.84 7.99 -2.39 -0.02 -0.86 16 37 H 0.09 -0.65 7.99 -2.39 -0.02 -0.67 16 38 H 0.08 -0.45 7.96 -2.39 -0.02 -0.47 16 39 H 0.07 -0.28 7.96 -2.38 -0.02 -0.30 16 40 H 0.08 -0.53 7.96 -2.39 -0.02 -0.55 16 41 H 0.05 0.10 7.96 -2.39 -0.02 0.08 16 42 H 0.06 0.08 7.96 -2.39 -0.02 0.06 16 43 H 0.08 -0.18 7.96 -2.39 -0.02 -0.20 16 44 H 0.08 0.42 6.89 -2.39 -0.02 0.41 16 45 H 0.09 -0.28 7.99 -2.38 -0.02 -0.30 16 46 H 0.43 -0.75 8.96 -92.71 -0.83 -1.58 16 Total: 0.00 -18.90 360.39 4.45 -14.44 By element: Atomic # 1 Polarization: -11.99 SS G_CDS: 0.32 Total: -11.67 kcal Atomic # 6 Polarization: 10.31 SS G_CDS: 6.17 Total: 16.48 kcal Atomic # 7 Polarization: -2.24 SS G_CDS: -2.71 Total: -4.95 kcal Atomic # 8 Polarization: -10.96 SS G_CDS: -1.99 Total: -12.95 kcal Atomic # 14 Polarization: -4.01 SS G_CDS: 2.66 Total: -1.35 kcal Total: -18.90 4.45 -14.44 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_15766672_12297754.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -53.620 kcal (2) G-P(sol) polarization free energy of solvation -18.898 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -72.518 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 4.453 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -14.445 kcal (6) G-S(sol) free energy of system = (1) + (5) -68.064 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.62 seconds