Wall clock time and date at job start Tue Mar 9 2021 12:59:42 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42903 * 1 3 3 C 1.35714 * 117.00392 * 2 1 4 4 C 1.38686 * 119.86038 * 359.97438 * 3 2 1 5 5 C 1.38445 * 120.03130 * 179.97438 * 4 3 2 6 6 O 1.35653 * 120.11880 * 180.02562 * 5 4 3 7 7 C 1.42896 * 117.00264 * 0.02562 * 6 5 4 8 8 C 1.40300 * 119.75712 * 359.79238 * 5 4 3 9 9 C 1.47303 * 120.13323 * 180.23237 * 8 5 4 10 10 O 1.21610 * 119.99981 * 54.56790 * 9 8 5 11 11 N 1.34776 * 119.99578 * 234.57023 * 9 8 5 12 12 C 1.46344 * 120.53170 * 5.23692 * 11 9 8 13 13 C 1.52013 * 111.97235 * 250.93941 * 12 11 9 14 14 C 1.53645 * 110.16665 * 288.87586 * 13 12 11 15 15 Si 1.87462 * 107.32558 * 60.23915 * 14 13 12 16 16 C 1.86299 * 110.01785 * 194.02016 * 15 14 13 17 17 C 1.86298 * 110.01462 * 72.58386 * 15 14 13 18 18 C 1.47788 * 120.53177 * 185.51467 * 11 9 8 19 19 C 1.39857 * 119.73071 * 0.48242 * 8 5 4 20 20 C 1.37548 * 119.96220 * 359.46809 * 19 8 5 21 21 C 1.50697 * 119.87828 * 180.27781 * 20 19 8 22 22 O 1.42900 * 109.47046 * 255.00211 * 21 20 19 23 23 Si 1.86301 * 109.47080 * 15.00478 * 21 20 19 24 24 H 1.48496 * 109.47456 * 59.99758 * 23 21 20 25 25 H 1.48507 * 109.46814 * 180.02562 * 23 21 20 26 26 H 1.48498 * 109.46983 * 299.99428 * 23 21 20 27 27 H 1.08998 * 109.47060 * 179.97438 * 1 2 3 28 28 H 1.09004 * 109.46444 * 299.99963 * 1 2 3 29 29 H 1.08996 * 109.47085 * 59.99785 * 1 2 3 30 30 H 1.08001 * 119.98216 * 0.02562 * 4 3 2 31 31 H 1.08995 * 109.47144 * 179.97438 * 7 6 5 32 32 H 1.09001 * 109.46997 * 300.00126 * 7 6 5 33 33 H 1.09003 * 109.47243 * 59.99963 * 7 6 5 34 34 H 1.09000 * 109.03810 * 11.48436 * 12 11 9 35 35 H 1.09007 * 109.03547 * 130.35000 * 12 11 9 36 36 H 1.08998 * 109.42151 * 168.61370 * 13 12 11 37 37 H 1.09004 * 109.25901 * 49.03827 * 13 12 11 38 38 H 1.09006 * 109.88702 * 300.78673 * 14 13 12 39 39 H 1.09001 * 109.88725 * 179.69351 * 14 13 12 40 40 H 1.08997 * 109.46984 * 177.20877 * 16 15 14 41 41 H 1.09007 * 109.46508 * 297.20613 * 16 15 14 42 42 H 1.08999 * 109.47203 * 57.20515 * 16 15 14 43 43 H 1.08997 * 109.47251 * 302.79343 * 17 15 14 44 44 H 1.08997 * 109.47414 * 62.79144 * 17 15 14 45 45 H 1.09000 * 109.47508 * 182.79444 * 17 15 14 46 46 H 1.09001 * 110.07836 * 244.43860 * 18 11 9 47 47 H 1.08997 * 110.08155 * 6.03771 * 18 11 9 48 48 H 1.08003 * 120.01709 * 179.74835 * 19 8 5 49 49 H 1.08995 * 109.46849 * 135.00370 * 21 20 19 50 50 H 0.96698 * 114.00309 * 299.99700 * 22 21 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0452 1.2092 0.0000 4 6 1.2872 2.3705 -0.0005 5 6 1.9121 3.6059 0.0000 6 8 1.1723 4.7430 0.0000 7 6 -0.2487 4.5925 0.0000 8 6 3.3132 3.6775 0.0055 9 6 3.9868 4.9875 0.0113 10 8 3.7185 5.8053 0.8704 11 7 4.9002 5.2797 -0.9357 12 6 5.1494 4.3520 -2.0397 13 6 6.5042 3.6735 -1.9177 14 6 7.6288 4.6816 -2.2001 15 14 7.4814 6.0526 -0.9302 16 6 8.5179 7.5126 -1.4448 17 6 8.0296 5.4362 0.7402 18 6 5.6707 6.5393 -0.8724 19 6 4.0679 2.5000 0.0002 20 6 3.4353 1.2786 0.0006 21 6 4.2504 0.0111 0.0012 22 8 4.2148 -0.5787 -1.2999 23 14 6.0132 0.4065 0.4559 24 1 6.0502 1.0194 1.8080 25 1 6.8165 -0.8426 0.4559 26 1 6.5783 1.3578 -0.5344 27 1 -0.3633 -1.0276 -0.0005 28 1 -0.3632 0.5139 0.8901 29 1 -0.3633 0.5138 -0.8899 30 1 0.2088 2.3111 -0.0005 31 1 -0.7182 5.5761 0.0005 32 1 -0.5559 4.0432 -0.8900 33 1 -0.5559 4.0432 0.8900 34 1 4.3718 3.5882 -2.0447 35 1 5.1127 4.9011 -2.9806 36 1 6.5651 2.8542 -2.6340 37 1 6.6186 3.2778 -0.9085 38 1 7.5155 5.0920 -3.2036 39 1 8.5981 4.1918 -2.1061 40 1 8.3871 8.3222 -0.7268 41 1 9.5676 7.2202 -1.4755 42 1 8.2056 7.8496 -2.4333 43 1 7.4338 4.5676 1.0204 44 1 9.0821 5.1560 0.6967 45 1 7.8937 6.2242 1.4809 46 1 5.4255 7.1712 -1.7260 47 1 5.4537 7.0643 0.0578 48 1 5.1468 2.5497 0.0003 49 1 3.8355 -0.6872 0.7281 50 1 3.3262 -0.8111 -1.6023 RHF calculation, no. of doubly occupied orbitals= 64 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_15766672_12297780.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:59:42 Heat of formation + Delta-G solvation = -142.493196 kcal Electronic energy + Delta-G solvation = -31680.525662 eV Core-core repulsion = 27604.583157 eV Total energy + Delta-G solvation = -4075.942505 eV No. of doubly occupied orbitals = 64 Molecular weight (most abundant/longest-lived isotopes) = 353.166 amu Computer time = 0.83 seconds Orbital eigenvalues (eV) -42.23014 -40.74830 -40.01863 -38.39688 -37.48337 -36.96724 -33.38807 -32.30362 -32.02038 -29.41183 -29.03457 -28.49626 -28.39895 -27.63442 -26.70909 -26.02159 -24.00718 -23.22231 -22.39969 -20.42696 -19.93182 -18.62189 -18.51446 -17.84013 -17.52190 -17.28296 -16.92022 -16.60391 -16.52980 -16.24457 -15.86605 -15.64343 -15.51974 -15.02192 -14.72090 -14.51839 -14.32723 -14.13947 -14.04314 -13.94145 -13.89305 -13.70332 -13.49013 -13.34921 -13.21912 -13.10936 -12.97576 -12.65723 -12.58432 -12.56297 -12.36542 -12.20605 -12.10827 -11.76347 -11.59779 -11.50321 -11.30938 -11.13666 -10.90765 -10.77036 -10.36334 -9.94641 -9.39807 -9.15359 -0.19391 0.02320 1.16297 1.43958 1.46296 1.49157 1.66338 1.77867 1.87414 1.90815 2.04733 2.09035 2.15360 2.38876 2.55626 3.33306 3.49698 3.56120 3.74495 3.93426 3.95649 4.05866 4.08551 4.12944 4.20004 4.24105 4.29149 4.33481 4.37792 4.47667 4.51367 4.59614 4.63940 4.70123 4.70579 4.73826 4.76658 4.82903 4.84600 4.85642 4.88411 4.97346 5.00063 5.05457 5.22109 5.27722 5.41915 5.48086 5.57485 5.63208 5.96169 6.20098 6.30653 6.69949 7.08199 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.012 3.988 2 O -0.312 6.312 3 C 0.205 3.795 4 C -0.296 4.296 5 C 0.204 3.796 6 O -0.325 6.325 7 C 0.014 3.986 8 C -0.216 4.216 9 C 0.561 3.439 10 O -0.576 6.576 11 N -0.589 5.589 12 C 0.088 3.912 13 C -0.138 4.138 14 C -0.400 4.400 15 Si 1.049 2.951 16 C -0.447 4.447 17 C -0.465 4.465 18 C -0.204 4.204 19 C -0.020 4.020 20 C -0.190 4.190 21 C -0.070 4.070 22 O -0.545 6.545 23 Si 0.991 3.009 24 H -0.255 1.255 25 H -0.263 1.263 26 H -0.226 1.226 27 H 0.125 0.875 28 H 0.065 0.935 29 H 0.072 0.928 30 H 0.169 0.831 31 H 0.114 0.886 32 H 0.077 0.923 33 H 0.071 0.929 34 H 0.086 0.914 35 H 0.095 0.905 36 H 0.095 0.905 37 H 0.060 0.940 38 H 0.095 0.905 39 H 0.091 0.909 40 H 0.067 0.933 41 H 0.079 0.921 42 H 0.079 0.921 43 H 0.054 0.946 44 H 0.082 0.918 45 H 0.062 0.938 46 H 0.085 0.915 47 H 0.076 0.924 48 H 0.146 0.854 49 H 0.086 0.914 50 H 0.378 0.622 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.144 -3.775 -4.270 6.089 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.082 4.082 2 O -0.224 6.224 3 C 0.158 3.842 4 C -0.315 4.315 5 C 0.156 3.844 6 O -0.238 6.238 7 C -0.080 4.080 8 C -0.220 4.220 9 C 0.350 3.650 10 O -0.457 6.457 11 N -0.321 5.321 12 C -0.034 4.034 13 C -0.176 4.176 14 C -0.488 4.488 15 Si 1.241 2.759 16 C -0.556 4.556 17 C -0.571 4.571 18 C -0.368 4.368 19 C -0.038 4.038 20 C -0.191 4.191 21 C -0.179 4.179 22 O -0.352 6.352 23 Si 0.811 3.189 24 H -0.178 1.178 25 H -0.187 1.187 26 H -0.149 1.149 27 H 0.143 0.857 28 H 0.084 0.916 29 H 0.090 0.910 30 H 0.186 0.814 31 H 0.132 0.868 32 H 0.096 0.904 33 H 0.089 0.911 34 H 0.104 0.896 35 H 0.114 0.886 36 H 0.113 0.887 37 H 0.078 0.922 38 H 0.114 0.886 39 H 0.110 0.890 40 H 0.087 0.913 41 H 0.099 0.901 42 H 0.098 0.902 43 H 0.074 0.926 44 H 0.101 0.899 45 H 0.082 0.918 46 H 0.103 0.897 47 H 0.095 0.905 48 H 0.163 0.837 49 H 0.104 0.896 50 H 0.227 0.773 Dipole moment (debyes) X Y Z Total from point charges -0.749 -3.041 -3.562 4.743 hybrid contribution -2.102 0.070 0.304 2.125 sum -2.851 -2.971 -3.258 5.251 Atomic orbital electron populations 1.23500 0.75700 1.06309 1.02661 1.86042 1.23922 1.25483 1.86944 1.18712 0.91009 0.84487 0.90018 1.21410 1.02190 0.90368 1.17547 1.18793 0.89551 0.85798 0.90283 1.86167 1.21551 1.29119 1.86914 1.23475 0.75818 1.05773 1.02934 1.18998 0.91349 0.93791 1.17834 1.18277 0.78811 0.86405 0.81458 1.90741 1.64590 1.50791 1.39557 1.47924 1.37964 1.20633 1.25549 1.21709 0.98847 0.93314 0.89490 1.21739 0.93568 0.99410 1.02862 1.26194 1.00968 1.09839 1.11760 0.79056 0.62274 0.67815 0.66766 1.26036 1.09690 1.13645 1.06188 1.26320 1.06368 1.05798 1.18639 1.27330 1.15781 0.88463 1.05250 1.20958 0.99978 0.89537 0.93313 1.19505 0.91528 0.96080 1.11985 1.25001 1.11589 0.92217 0.89058 1.86653 1.34611 1.82032 1.31867 0.84864 0.72985 0.80783 0.80259 1.17845 1.18714 1.14885 0.85721 0.91590 0.90988 0.81356 0.86809 0.90410 0.91077 0.89597 0.88631 0.88676 0.92176 0.88600 0.89043 0.91336 0.90150 0.90192 0.92629 0.89891 0.91848 0.89683 0.90522 0.83650 0.89649 0.77264 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.10 9.80 113.37 1.11 1.01 16 2 O -0.31 0.60 9.36 -90.36 -0.85 -0.25 16 3 C 0.21 0.33 6.62 22.60 0.15 0.48 16 4 C -0.30 -0.46 8.01 22.43 0.18 -0.29 16 5 C 0.20 1.58 6.68 22.82 0.15 1.73 16 6 O -0.33 -2.95 9.70 -86.88 -0.84 -3.80 16 7 C 0.01 -0.02 9.81 113.37 1.11 1.09 16 8 C -0.22 -2.07 4.55 -20.00 -0.09 -2.16 16 9 C 0.56 7.58 6.80 86.63 0.59 8.17 16 10 O -0.58 -12.63 16.23 -1.26 -0.02 -12.65 16 11 N -0.59 -3.93 2.64 -630.45 -1.66 -5.59 16 12 C 0.09 0.05 5.00 86.08 0.43 0.48 16 13 C -0.14 0.26 5.08 30.49 0.15 0.42 16 14 C -0.40 1.91 5.03 72.20 0.36 2.27 16 15 Si 1.05 -3.17 11.99 68.60 0.82 -2.35 16 16 C -0.45 1.70 8.65 113.37 0.98 2.68 16 17 C -0.47 -0.53 8.65 113.37 0.98 0.45 16 18 C -0.20 -0.80 5.43 127.52 0.69 -0.11 16 19 C -0.02 -0.11 6.46 22.50 0.15 0.04 16 20 C -0.19 -0.62 5.27 -19.80 -0.10 -0.72 16 21 C -0.07 -0.10 2.32 71.23 0.17 0.07 16 22 O -0.54 -0.75 12.65 -148.98 -1.89 -2.64 16 23 Si 0.99 1.88 25.74 68.60 1.77 3.64 16 24 H -0.25 -0.80 7.11 99.48 0.71 -0.09 16 25 H -0.26 -0.99 7.11 99.48 0.71 -0.29 16 26 H -0.23 0.04 5.06 99.48 0.50 0.55 16 27 H 0.12 -1.47 8.14 -2.39 -0.02 -1.49 16 28 H 0.07 -0.61 7.65 -2.39 -0.02 -0.63 16 29 H 0.07 -0.75 7.65 -2.39 -0.02 -0.77 16 30 H 0.17 -0.76 4.50 -2.91 -0.01 -0.77 16 31 H 0.11 -0.41 8.14 -2.39 -0.02 -0.43 16 32 H 0.08 -0.46 7.66 -2.39 -0.02 -0.48 16 33 H 0.07 -0.30 7.66 -2.39 -0.02 -0.32 16 34 H 0.09 0.11 5.56 -2.39 -0.01 0.09 16 35 H 0.10 -0.27 8.10 -2.38 -0.02 -0.29 16 36 H 0.09 -0.37 8.14 -2.39 -0.02 -0.39 16 37 H 0.06 -0.03 4.83 -2.39 -0.01 -0.04 16 38 H 0.10 -0.68 7.99 -2.38 -0.02 -0.70 16 39 H 0.09 -0.56 7.99 -2.39 -0.02 -0.58 16 40 H 0.07 -0.18 7.96 -2.39 -0.02 -0.20 16 41 H 0.08 -0.37 7.96 -2.38 -0.02 -0.39 16 42 H 0.08 -0.39 7.96 -2.39 -0.02 -0.41 16 43 H 0.05 0.19 7.96 -2.39 -0.02 0.17 16 44 H 0.08 -0.11 7.96 -2.39 -0.02 -0.13 16 45 H 0.06 0.18 7.96 -2.39 -0.02 0.16 16 46 H 0.08 0.10 8.00 -2.39 -0.02 0.08 16 47 H 0.08 0.68 6.94 -2.39 -0.02 0.67 16 48 H 0.15 0.51 2.75 -2.91 -0.01 0.50 16 49 H 0.09 -0.03 7.82 -2.39 -0.02 -0.05 16 50 H 0.38 -1.24 8.58 -74.06 -0.64 -1.87 16 Total: 0.00 -21.34 387.60 5.22 -16.12 By element: Atomic # 1 Polarization: -8.97 SS G_CDS: 0.88 Total: -8.10 kcal Atomic # 6 Polarization: 8.60 SS G_CDS: 7.01 Total: 15.61 kcal Atomic # 7 Polarization: -3.93 SS G_CDS: -1.66 Total: -5.59 kcal Atomic # 8 Polarization: -15.75 SS G_CDS: -3.59 Total: -19.34 kcal Atomic # 14 Polarization: -1.30 SS G_CDS: 2.59 Total: 1.29 kcal Total: -21.34 5.22 -16.12 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_15766672_12297780.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -126.376 kcal (2) G-P(sol) polarization free energy of solvation -21.340 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -147.717 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 5.224 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.117 kcal (6) G-S(sol) free energy of system = (1) + (5) -142.493 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.83 seconds