Wall clock time and date at job start Tue Mar 9 2021 12:59:53 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 Si 1.86296 * 1 3 3 C 1.86305 * 110.07483 * 2 1 4 4 C 1.87458 * 110.01503 * 238.60722 * 2 1 3 5 5 C 1.53652 * 107.32337 * 194.01864 * 4 2 1 6 6 C 1.52010 * 110.16759 * 60.23545 * 5 4 2 7 7 N 1.46335 * 111.97249 * 288.87447 * 6 5 4 8 8 C 1.34771 * 120.53414 * 250.93741 * 7 6 5 9 9 O 1.21572 * 120.00647 * 185.39095 * 8 7 6 10 10 C 1.47699 * 119.99774 * 5.40018 * 8 7 6 11 11 C 1.39616 * 120.16498 * 53.91136 * 10 8 7 12 12 C 1.37905 * 119.87817 * 179.97438 * 11 10 8 13 13 C 1.50691 * 119.89158 * 179.97438 * 12 11 10 14 14 O 1.42903 * 109.47541 * 65.02141 * 13 12 11 15 15 Si 1.86301 * 109.47171 * 185.01879 * 13 12 11 16 16 H 1.48512 * 109.46874 * 60.00242 * 15 13 12 17 17 H 1.48502 * 109.47498 * 179.97438 * 15 13 12 18 18 H 1.48497 * 109.47299 * 300.00174 * 15 13 12 19 19 C 1.38415 * 120.21396 * 359.97438 * 12 11 10 20 20 C 1.38248 * 120.34146 * 359.97438 * 19 12 11 21 21 C 1.38269 * 120.11753 * 0.27818 * 20 19 12 22 22 F 1.35100 * 120.11214 * 179.70019 * 21 20 19 23 23 C 1.47798 * 118.93556 * 70.67163 * 7 6 5 24 24 H 1.09002 * 109.46802 * 298.60342 * 1 2 3 25 25 H 1.08998 * 109.47591 * 58.60224 * 1 2 3 26 26 H 1.08998 * 109.47386 * 178.60658 * 1 2 3 27 27 H 1.09006 * 109.47199 * 181.39696 * 3 2 1 28 28 H 1.08999 * 109.47147 * 301.39788 * 3 2 1 29 29 H 1.08999 * 109.47231 * 61.39960 * 3 2 1 30 30 H 1.09005 * 109.88344 * 313.46867 * 4 2 1 31 31 H 1.08995 * 109.88883 * 74.55740 * 4 2 1 32 32 H 1.09002 * 109.35698 * 180.53582 * 5 4 2 33 33 H 1.09001 * 109.35613 * 300.13297 * 5 4 2 34 34 H 1.08994 * 108.87367 * 168.23201 * 6 5 4 35 35 H 1.09000 * 108.91121 * 49.53892 * 6 5 4 36 36 H 1.07999 * 120.06656 * 359.95420 * 11 10 8 37 37 H 1.08998 * 109.47430 * 305.01623 * 13 12 11 38 38 H 0.96706 * 113.99743 * 59.99491 * 14 13 12 39 39 H 1.08001 * 119.82715 * 179.97438 * 19 12 11 40 40 H 1.08004 * 119.93827 * 179.97438 * 20 19 12 41 41 H 1.08990 * 110.08482 * 64.70733 * 23 7 6 42 42 H 1.09005 * 110.07846 * 186.31499 * 23 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 14 1.8630 0.0000 0.0000 3 6 2.5024 1.7499 0.0000 4 6 2.5046 -0.9175 -1.5035 5 6 3.9983 -1.1910 -1.2696 6 6 4.1867 -2.0398 -0.0227 7 7 3.9034 -1.2872 1.1999 8 6 4.9021 -0.9316 2.0320 9 8 4.6477 -0.3933 3.0920 10 6 6.3058 -1.1956 1.6561 11 6 6.8030 -0.7377 0.4344 12 6 8.1147 -0.9871 0.0896 13 6 8.6515 -0.4935 -1.2291 14 8 8.6518 0.9355 -1.2385 15 14 10.3915 -1.1163 -1.4636 16 1 10.3913 -2.6014 -1.4540 17 1 10.9203 -0.6304 -2.7635 18 1 11.2499 -0.6143 -0.3607 19 6 8.9399 -1.6894 0.9509 20 6 8.4572 -2.1461 2.1633 21 6 7.1429 -1.9083 2.5207 22 9 6.6697 -2.3599 3.7028 23 6 2.5050 -0.9182 1.5046 24 1 -0.3633 0.4920 0.9023 25 1 -0.3634 0.5354 -0.8771 26 1 -0.3634 -1.0273 -0.0250 27 1 3.5922 1.7385 -0.0251 28 1 2.1243 2.2749 -0.8772 29 1 2.1651 2.2600 0.9023 30 1 1.9688 -1.8597 -1.6194 31 1 2.3750 -0.3043 -2.3953 32 1 4.4086 -1.7171 -2.1316 33 1 4.5235 -0.2443 -1.1429 34 1 5.2165 -2.3955 0.0094 35 1 3.5170 -2.8981 -0.0751 36 1 6.1614 -0.1894 -0.2395 37 1 8.0215 -0.8620 -2.0387 38 1 9.1934 1.3333 -0.5430 39 1 9.9660 -1.8816 0.6744 40 1 9.1067 -2.6937 2.8302 41 1 1.9104 -1.8151 1.6775 42 1 2.4713 -0.2707 2.3808 RHF calculation, no. of doubly occupied orbitals= 55 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_22_15766672_12335834.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:59:53 Heat of formation + Delta-G solvation = -120.559247 kcal Electronic energy + Delta-G solvation = -24798.388966 eV Core-core repulsion = 21202.383234 eV Total energy + Delta-G solvation = -3596.005731 eV No. of doubly occupied orbitals = 55 Molecular weight (most abundant/longest-lived isotopes) = 311.127 amu Computer time = 0.51 seconds Orbital eigenvalues (eV) -49.95035 -41.47650 -39.93956 -37.60425 -37.48163 -33.48466 -32.90619 -32.37908 -29.52421 -28.53251 -28.07082 -26.96090 -26.73118 -24.70040 -23.34814 -22.50655 -20.35903 -19.06154 -18.40785 -18.33626 -17.56497 -17.28234 -16.58665 -16.36358 -16.22706 -16.04579 -15.77425 -15.36895 -15.01276 -14.87826 -14.45227 -14.41147 -14.18459 -14.16656 -13.97369 -13.77079 -13.58595 -13.37080 -13.29710 -13.24800 -13.07688 -12.78929 -12.41266 -12.32636 -12.24938 -12.18909 -11.76782 -11.58157 -11.03185 -10.92210 -10.58231 -10.55598 -10.26153 -9.86807 -9.33461 -0.38187 -0.09359 0.98423 1.29797 1.36641 1.39742 1.60733 1.65248 1.73747 1.78733 2.00815 2.30983 2.43207 3.00098 3.21546 3.30124 3.42460 3.56395 3.74598 3.79050 3.92737 4.04575 4.26546 4.31265 4.42395 4.46771 4.52978 4.63337 4.64354 4.65552 4.69279 4.70496 4.71181 4.76899 4.81366 4.88055 4.97340 5.01825 5.10224 5.22536 5.36743 5.44791 5.50168 5.54655 6.27269 6.39045 7.11644 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.445 4.445 2 Si 0.996 3.004 3 C -0.445 4.445 4 C -0.403 4.403 5 C -0.130 4.130 6 C 0.092 3.908 7 N -0.589 5.589 8 C 0.558 3.442 9 O -0.520 6.520 10 C -0.161 4.161 11 C -0.035 4.035 12 C -0.136 4.136 13 C -0.079 4.079 14 O -0.536 6.536 15 Si 0.945 3.055 16 H -0.247 1.247 17 H -0.250 1.250 18 H -0.249 1.249 19 C -0.077 4.077 20 C -0.149 4.149 21 C 0.150 3.850 22 F -0.122 7.122 23 C -0.182 4.182 24 H 0.072 0.928 25 H 0.073 0.927 26 H 0.071 0.929 27 H 0.068 0.932 28 H 0.071 0.929 29 H 0.071 0.929 30 H 0.080 0.920 31 H 0.081 0.919 32 H 0.081 0.919 33 H 0.069 0.931 34 H 0.087 0.913 35 H 0.080 0.920 36 H 0.146 0.854 37 H 0.122 0.878 38 H 0.379 0.621 39 H 0.135 0.865 40 H 0.148 0.852 41 H 0.077 0.923 42 H 0.102 0.898 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.983 -1.785 -5.380 5.753 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.554 4.554 2 Si 1.191 2.809 3 C -0.553 4.553 4 C -0.489 4.489 5 C -0.168 4.168 6 C -0.031 4.031 7 N -0.321 5.321 8 C 0.346 3.654 9 O -0.396 6.396 10 C -0.165 4.165 11 C -0.053 4.053 12 C -0.137 4.137 13 C -0.190 4.190 14 O -0.341 6.341 15 Si 0.767 3.233 16 H -0.171 1.171 17 H -0.174 1.174 18 H -0.173 1.173 19 C -0.095 4.095 20 C -0.168 4.168 21 C 0.130 3.870 22 F -0.100 7.100 23 C -0.349 4.349 24 H 0.091 0.909 25 H 0.092 0.908 26 H 0.090 0.910 27 H 0.087 0.913 28 H 0.091 0.909 29 H 0.090 0.910 30 H 0.099 0.901 31 H 0.099 0.901 32 H 0.100 0.900 33 H 0.087 0.913 34 H 0.105 0.895 35 H 0.098 0.902 36 H 0.163 0.837 37 H 0.140 0.860 38 H 0.226 0.774 39 H 0.153 0.847 40 H 0.166 0.834 41 H 0.095 0.905 42 H 0.120 0.880 Dipole moment (debyes) X Y Z Total from point charges 1.274 -1.934 -5.350 5.830 hybrid contribution -0.134 -0.016 0.886 0.896 sum 1.140 -1.949 -4.465 5.003 Atomic orbital electron populations 1.26033 1.19725 1.04776 1.04861 0.79828 0.67183 0.67621 0.66259 1.26058 1.06383 1.18150 1.04676 1.26204 1.00027 1.08455 1.14259 1.21548 0.97054 1.00746 0.97427 1.21551 1.03145 0.94762 0.83607 1.47749 1.06410 1.55686 1.22304 1.18095 0.84425 0.79192 0.83730 1.90831 1.83881 1.42453 1.22471 1.20011 0.95079 1.04750 0.96680 1.21142 0.95114 0.95655 0.93404 1.20318 0.94421 1.01005 0.97936 1.24981 1.12212 0.85501 0.96256 1.86539 1.73688 1.16695 1.57198 0.85736 0.75088 0.80734 0.81719 1.17072 1.17358 1.17296 1.21104 0.99724 0.95714 0.92919 1.21092 0.93815 1.03344 0.98511 1.17673 0.92114 0.95576 0.81640 1.91588 1.88645 1.86325 1.43458 1.26915 0.84424 1.07583 1.16021 0.90916 0.90802 0.90957 0.91315 0.90943 0.91012 0.90150 0.90055 0.90016 0.91266 0.89486 0.90157 0.83657 0.85992 0.77393 0.84704 0.83417 0.90454 0.87975 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.45 0.95 8.65 101.05 0.87 1.83 16 2 Si 1.00 -2.62 11.99 -169.99 -2.04 -4.66 16 3 C -0.44 0.37 8.65 101.05 0.87 1.25 16 4 C -0.40 1.24 5.03 37.50 0.19 1.43 16 5 C -0.13 0.38 5.33 -26.90 -0.14 0.23 16 6 C 0.09 -0.16 5.00 -4.63 -0.02 -0.18 16 7 N -0.59 -0.62 2.63 -113.12 -0.30 -0.92 16 8 C 0.56 2.28 6.89 -12.40 -0.09 2.20 16 9 O -0.52 -4.25 16.32 5.30 0.09 -4.16 16 10 C -0.16 -0.34 4.55 -104.91 -0.48 -0.82 16 11 C -0.03 0.01 7.49 -39.19 -0.29 -0.28 16 12 C -0.14 0.20 5.35 -104.68 -0.56 -0.35 16 13 C -0.08 0.21 2.80 36.00 0.10 0.31 16 14 O -0.54 0.81 12.83 -35.23 -0.45 0.36 16 15 Si 0.95 -2.39 25.13 -169.99 -4.27 -6.66 16 16 H -0.25 0.53 7.11 56.52 0.40 0.93 16 17 H -0.25 0.19 7.11 56.52 0.40 0.60 16 18 H -0.25 0.57 7.04 56.52 0.40 0.97 16 19 C -0.08 0.12 8.66 -39.51 -0.34 -0.22 16 20 C -0.15 0.04 10.01 -39.57 -0.40 -0.36 16 21 C 0.15 0.37 7.27 -38.96 -0.28 0.08 16 22 F -0.12 -0.59 16.66 2.25 0.04 -0.55 16 23 C -0.18 -0.02 5.43 60.56 0.33 0.31 16 24 H 0.07 -0.13 7.96 -51.93 -0.41 -0.54 16 25 H 0.07 -0.16 7.96 -51.93 -0.41 -0.57 16 26 H 0.07 -0.17 7.96 -51.93 -0.41 -0.58 16 27 H 0.07 0.00 7.96 -51.93 -0.41 -0.42 16 28 H 0.07 -0.10 7.96 -51.93 -0.41 -0.51 16 29 H 0.07 -0.01 7.96 -51.93 -0.41 -0.43 16 30 H 0.08 -0.28 7.99 -51.93 -0.41 -0.69 16 31 H 0.08 -0.26 7.99 -51.93 -0.41 -0.67 16 32 H 0.08 -0.32 8.14 -51.93 -0.42 -0.74 16 33 H 0.07 -0.19 6.18 -51.93 -0.32 -0.51 16 34 H 0.09 -0.18 5.55 -51.93 -0.29 -0.47 16 35 H 0.08 -0.21 8.10 -51.93 -0.42 -0.63 16 36 H 0.15 -0.22 5.74 -52.49 -0.30 -0.52 16 37 H 0.12 -0.48 7.96 -51.93 -0.41 -0.89 16 38 H 0.38 -1.64 8.70 45.56 0.40 -1.25 16 39 H 0.14 -0.44 4.84 -52.49 -0.25 -0.70 16 40 H 0.15 -0.32 8.06 -52.48 -0.42 -0.74 16 41 H 0.08 -0.07 8.00 -51.93 -0.42 -0.48 16 42 H 0.10 0.20 6.94 -51.93 -0.36 -0.16 16 LS Contribution 339.88 15.07 5.12 5.12 Total: 0.00 -7.70 339.88 -7.39 -15.08 By element: Atomic # 1 Polarization: -3.68 SS G_CDS: -5.33 Total: -9.02 kcal Atomic # 6 Polarization: 5.65 SS G_CDS: -0.24 Total: 5.41 kcal Atomic # 7 Polarization: -0.62 SS G_CDS: -0.30 Total: -0.92 kcal Atomic # 8 Polarization: -3.44 SS G_CDS: -0.37 Total: -3.80 kcal Atomic # 9 Polarization: -0.59 SS G_CDS: 0.04 Total: -0.55 kcal Atomic # 14 Polarization: -5.01 SS G_CDS: -6.31 Total: -11.32 kcal Total LS contribution 5.12 Total: 5.12 kcal Total: -7.70 -7.39 -15.08 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_15766672_12335834.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -105.477 kcal (2) G-P(sol) polarization free energy of solvation -7.697 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -113.174 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.385 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.082 kcal (6) G-S(sol) free energy of system = (1) + (5) -120.559 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.51 seconds