Wall clock time and date at job start Tue Mar 9 2021 13:00:01 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 Si 1.86301 * 1 3 3 C 1.86300 * 110.07487 * 2 1 4 4 C 1.87457 * 110.01522 * 238.60009 * 2 1 3 5 5 C 1.53648 * 107.32104 * 194.01860 * 4 2 1 6 6 C 1.52015 * 110.16714 * 60.24108 * 5 4 2 7 7 N 1.46341 * 111.96995 * 288.87404 * 6 5 4 8 8 C 1.34774 * 120.52574 * 250.94042 * 7 6 5 9 9 O 1.21289 * 119.99362 * 179.72852 * 8 7 6 10 10 C 1.50697 * 120.00735 * 359.71966 * 8 7 6 11 11 C 1.50698 * 109.47556 * 179.97438 * 10 8 7 12 12 C 1.38228 * 120.00200 * 270.28677 * 11 10 8 13 13 C 1.38238 * 120.00120 * 180.23540 * 12 11 10 14 14 C 1.38234 * 119.99675 * 359.47825 * 13 12 11 15 15 C 1.50703 * 120.00257 * 180.27927 * 14 13 12 16 16 O 1.42908 * 109.46633 * 65.00233 * 15 14 13 17 17 Si 1.86297 * 109.47442 * 185.00250 * 15 14 13 18 18 H 1.48499 * 109.47302 * 300.00318 * 17 15 14 19 19 H 1.48503 * 109.47012 * 60.00177 * 17 15 14 20 20 H 1.48496 * 109.47110 * 180.02562 * 17 15 14 21 21 C 1.38234 * 120.00240 * 0.26327 * 14 13 12 22 22 C 1.38234 * 119.99739 * 90.00042 * 11 10 8 23 23 C 1.47785 * 118.93642 * 70.67002 * 7 6 5 24 24 H 1.08997 * 109.47508 * 298.60783 * 1 2 3 25 25 H 1.09004 * 109.46771 * 58.60979 * 1 2 3 26 26 H 1.09005 * 109.47547 * 178.60347 * 1 2 3 27 27 H 1.08995 * 109.46978 * 181.39431 * 3 2 1 28 28 H 1.09000 * 109.46729 * 301.39224 * 3 2 1 29 29 H 1.08994 * 109.47062 * 61.38923 * 3 2 1 30 30 H 1.08998 * 109.88995 * 313.47104 * 4 2 1 31 31 H 1.08995 * 109.88705 * 74.48902 * 4 2 1 32 32 H 1.08999 * 109.36237 * 180.53926 * 5 4 2 33 33 H 1.08997 * 109.36465 * 300.27119 * 5 4 2 34 34 H 1.09002 * 108.87060 * 168.23132 * 6 5 4 35 35 H 1.09004 * 108.91143 * 49.54034 * 6 5 4 36 36 H 1.09007 * 109.46721 * 60.00010 * 10 8 7 37 37 H 1.08993 * 109.47200 * 300.00335 * 10 8 7 38 38 H 1.08004 * 120.00256 * 359.97438 * 12 11 10 39 39 H 1.08002 * 120.00519 * 179.76445 * 13 12 11 40 40 H 1.09000 * 109.46946 * 305.01070 * 15 14 13 41 41 H 0.96707 * 113.99859 * 180.02562 * 16 15 14 42 42 H 1.07997 * 120.00460 * 180.02562 * 21 14 13 43 43 H 1.08001 * 120.00310 * 0.02562 * 22 11 10 44 44 H 1.09003 * 110.08466 * 64.70662 * 23 7 6 45 45 H 1.09000 * 110.08258 * 186.20372 * 23 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 14 1.8630 0.0000 0.0000 3 6 2.5025 1.7498 0.0000 4 6 2.5046 -0.9177 -1.5034 5 6 3.9984 -1.1911 -1.2694 6 6 4.1867 -2.0399 -0.0224 7 7 3.9032 -1.2872 1.2002 8 6 4.9021 -0.9315 2.0322 9 8 4.6567 -0.3034 3.0404 10 6 6.3236 -1.3142 1.7101 11 6 7.2395 -0.7999 2.7906 12 6 7.7935 0.4621 2.6843 13 6 8.6375 0.9320 3.6731 14 6 8.9190 0.1440 4.7735 15 6 9.8342 0.6586 5.8546 16 8 9.2292 1.7839 6.4949 17 14 10.1296 -0.6856 7.1101 18 1 8.8348 -1.0950 7.7110 19 1 10.7582 -1.8550 6.4447 20 1 11.0309 -0.1783 8.1757 21 6 8.3608 -1.1159 4.8824 22 6 7.5210 -1.5878 3.8909 23 6 2.5050 -0.9182 1.5047 24 1 -0.3634 0.4920 0.9022 25 1 -0.3633 0.5353 -0.8773 26 1 -0.3634 -1.0274 -0.0250 27 1 3.5921 1.7384 -0.0250 28 1 2.1244 2.2747 -0.8773 29 1 2.1650 2.2599 0.9021 30 1 1.9690 -1.8599 -1.6193 31 1 2.3740 -0.3051 -2.3954 32 1 4.4088 -1.7172 -2.1313 33 1 4.5232 -0.2446 -1.1403 34 1 5.2166 -2.3956 0.0097 35 1 3.5170 -2.8983 -0.0748 36 1 6.6096 -0.8771 0.7533 37 1 6.4033 -2.3996 1.6519 38 1 7.5702 1.0794 1.8267 39 1 9.0734 1.9165 3.5883 40 1 10.7845 0.9592 5.4135 41 1 9.7641 2.1680 7.2031 42 1 8.5804 -1.7314 5.7422 43 1 7.0848 -2.5722 3.9761 44 1 1.9103 -1.8152 1.6776 45 1 2.4709 -0.2722 2.3820 RHF calculation, no. of doubly occupied orbitals= 55 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_22_15766672_12335836.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:00:01 Heat of formation + Delta-G solvation = -83.453867 kcal Electronic energy + Delta-G solvation = -23344.666583 eV Core-core repulsion = 20064.186218 eV Total energy + Delta-G solvation = -3280.480365 eV No. of doubly occupied orbitals = 55 Molecular weight (most abundant/longest-lived isotopes) = 307.152 amu Computer time = 0.52 seconds Orbital eigenvalues (eV) -41.16143 -40.04780 -37.67356 -37.28526 -34.09420 -33.40159 -31.83206 -30.33609 -29.39066 -28.51165 -27.76948 -26.61416 -25.03197 -23.72367 -22.80881 -21.74827 -19.91819 -18.43071 -18.10399 -17.63864 -16.96476 -16.80985 -16.41677 -16.02999 -15.46231 -15.28765 -14.96764 -14.78260 -14.43758 -14.29259 -14.24117 -14.18608 -14.06197 -13.94865 -13.57585 -13.36308 -13.29546 -13.23359 -13.11018 -13.00315 -12.82883 -12.32297 -12.22089 -12.11387 -12.08071 -11.73750 -11.60179 -11.48074 -10.95939 -10.68310 -10.52227 -10.28112 -9.72950 -9.47652 -9.24542 0.35955 0.59494 1.19462 1.45877 1.47567 1.54289 1.68664 1.72877 1.85419 1.95419 2.13733 2.46357 2.81295 3.49520 3.68114 3.70406 3.81748 3.89251 3.95815 4.00456 4.12488 4.25515 4.30692 4.41043 4.48230 4.50888 4.55783 4.58871 4.64986 4.65999 4.67383 4.71388 4.73246 4.80417 4.82761 5.01439 5.06350 5.11115 5.18993 5.24673 5.40198 5.48669 5.51989 5.53240 5.67562 5.70307 6.11475 6.43040 6.64342 7.31635 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.446 4.446 2 Si 0.997 3.003 3 C -0.444 4.444 4 C -0.404 4.404 5 C -0.128 4.128 6 C 0.096 3.904 7 N -0.600 5.600 8 C 0.511 3.489 9 O -0.526 6.526 10 C -0.103 4.103 11 C -0.064 4.064 12 C -0.103 4.103 13 C -0.087 4.087 14 C -0.075 4.075 15 C -0.081 4.081 16 O -0.543 6.543 17 Si 0.946 3.054 18 H -0.248 1.248 19 H -0.250 1.250 20 H -0.258 1.258 21 C -0.121 4.121 22 C -0.099 4.099 23 C -0.181 4.181 24 H 0.071 0.929 25 H 0.072 0.928 26 H 0.071 0.929 27 H 0.067 0.933 28 H 0.070 0.930 29 H 0.070 0.930 30 H 0.078 0.922 31 H 0.078 0.922 32 H 0.078 0.922 33 H 0.067 0.933 34 H 0.086 0.914 35 H 0.077 0.923 36 H 0.104 0.896 37 H 0.104 0.896 38 H 0.122 0.878 39 H 0.126 0.874 40 H 0.075 0.925 41 H 0.379 0.621 42 H 0.120 0.880 43 H 0.123 0.877 44 H 0.073 0.927 45 H 0.100 0.900 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.092 -2.160 -4.526 5.132 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.555 4.555 2 Si 1.192 2.808 3 C -0.552 4.552 4 C -0.490 4.490 5 C -0.166 4.166 6 C -0.027 4.027 7 N -0.334 5.334 8 C 0.299 3.701 9 O -0.401 6.401 10 C -0.143 4.143 11 C -0.064 4.064 12 C -0.122 4.122 13 C -0.105 4.105 14 C -0.075 4.075 15 C -0.192 4.192 16 O -0.349 6.349 17 Si 0.769 3.231 18 H -0.171 1.171 19 H -0.173 1.173 20 H -0.182 1.182 21 C -0.139 4.139 22 C -0.117 4.117 23 C -0.349 4.349 24 H 0.090 0.910 25 H 0.091 0.909 26 H 0.090 0.910 27 H 0.086 0.914 28 H 0.089 0.911 29 H 0.089 0.911 30 H 0.097 0.903 31 H 0.097 0.903 32 H 0.097 0.903 33 H 0.086 0.914 34 H 0.104 0.896 35 H 0.095 0.905 36 H 0.122 0.878 37 H 0.122 0.878 38 H 0.140 0.860 39 H 0.144 0.856 40 H 0.093 0.907 41 H 0.226 0.774 42 H 0.137 0.863 43 H 0.141 0.859 44 H 0.091 0.909 45 H 0.119 0.881 Dipole moment (debyes) X Y Z Total from point charges 0.642 -2.629 -3.770 4.641 hybrid contribution 0.315 0.367 0.034 0.485 sum 0.957 -2.262 -3.736 4.471 Atomic orbital electron populations 1.26052 1.19954 1.04695 1.04784 0.79799 0.66976 0.67611 0.66450 1.26050 1.06331 1.18262 1.04533 1.26206 1.00214 1.08371 1.14228 1.21470 0.96880 1.00846 0.97441 1.21464 1.02768 0.94660 0.83834 1.47879 1.06533 1.56577 1.22460 1.20587 0.86769 0.79656 0.83102 1.90744 1.84053 1.39311 1.26028 1.20738 0.91163 1.03184 0.99183 1.19282 0.96965 0.94765 0.95387 1.20987 0.96999 0.94880 0.99287 1.20923 0.97482 0.99178 0.92950 1.19229 0.98811 0.94331 0.95172 1.24738 0.97403 0.97300 0.99745 1.86542 1.48121 1.46563 1.53677 0.85752 0.80847 0.78102 0.78386 1.17144 1.17337 1.18206 1.20915 0.98076 0.95815 0.99063 1.20850 0.97643 0.99905 0.93306 1.26791 0.85129 1.07320 1.15691 0.90962 0.90901 0.91017 0.91370 0.91129 0.91067 0.90285 0.90271 0.90315 0.91391 0.89551 0.90515 0.87778 0.87814 0.85956 0.85608 0.90677 0.77389 0.86283 0.85873 0.90882 0.88123 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.45 0.82 8.65 101.05 0.87 1.70 16 2 Si 1.00 -2.43 11.99 -169.99 -2.04 -4.47 16 3 C -0.44 0.22 8.65 101.05 0.87 1.10 16 4 C -0.40 1.16 5.03 37.49 0.19 1.35 16 5 C -0.13 0.39 5.67 -26.90 -0.15 0.23 16 6 C 0.10 -0.26 5.65 -4.63 -0.03 -0.29 16 7 N -0.60 -0.12 2.63 -112.02 -0.30 -0.41 16 8 C 0.51 1.33 7.69 -10.99 -0.08 1.25 16 9 O -0.53 -3.77 15.47 5.55 0.09 -3.68 16 10 C -0.10 0.02 4.18 -29.04 -0.12 -0.10 16 11 C -0.06 -0.15 4.37 -104.63 -0.46 -0.61 16 12 C -0.10 -0.26 9.70 -39.58 -0.38 -0.65 16 13 C -0.09 -0.26 9.69 -39.58 -0.38 -0.64 16 14 C -0.08 -0.24 5.38 -104.62 -0.56 -0.80 16 15 C -0.08 -0.09 2.79 36.01 0.10 0.01 16 16 O -0.54 -0.98 12.81 -35.23 -0.45 -1.44 16 17 Si 0.95 0.56 25.14 -169.99 -4.27 -3.71 16 18 H -0.25 -0.57 7.04 56.52 0.40 -0.17 16 19 H -0.25 -0.22 7.11 56.52 0.40 0.18 16 20 H -0.26 -0.12 7.11 56.52 0.40 0.28 16 21 C -0.12 -0.38 8.67 -39.58 -0.34 -0.72 16 22 C -0.10 -0.27 9.70 -39.58 -0.38 -0.65 16 23 C -0.18 0.00 5.44 60.55 0.33 0.33 16 24 H 0.07 -0.10 7.96 -51.93 -0.41 -0.52 16 25 H 0.07 -0.14 7.96 -51.93 -0.41 -0.55 16 26 H 0.07 -0.15 7.96 -51.93 -0.41 -0.56 16 27 H 0.07 0.02 7.96 -51.93 -0.41 -0.40 16 28 H 0.07 -0.07 7.96 -51.93 -0.41 -0.48 16 29 H 0.07 0.02 7.96 -51.93 -0.41 -0.39 16 30 H 0.08 -0.25 7.99 -51.93 -0.41 -0.67 16 31 H 0.08 -0.22 7.99 -51.93 -0.41 -0.64 16 32 H 0.08 -0.30 8.14 -51.93 -0.42 -0.72 16 33 H 0.07 -0.18 7.89 -51.93 -0.41 -0.59 16 34 H 0.09 -0.37 5.93 -51.93 -0.31 -0.67 16 35 H 0.08 -0.26 8.10 -51.93 -0.42 -0.68 16 36 H 0.10 -0.26 7.95 -51.93 -0.41 -0.67 16 37 H 0.10 -0.25 7.55 -51.93 -0.39 -0.64 16 38 H 0.12 0.09 8.06 -52.48 -0.42 -0.33 16 39 H 0.13 0.21 8.06 -52.49 -0.42 -0.21 16 40 H 0.08 -0.07 7.96 -51.93 -0.41 -0.49 16 41 H 0.38 -1.09 8.74 45.56 0.40 -0.69 16 42 H 0.12 0.21 4.87 -52.49 -0.26 -0.04 16 43 H 0.12 0.10 8.06 -52.49 -0.42 -0.32 16 44 H 0.07 -0.06 8.00 -51.93 -0.42 -0.48 16 45 H 0.10 0.22 6.91 -51.93 -0.36 -0.14 16 LS Contribution 360.53 15.07 5.43 5.43 Total: 0.00 -8.51 360.53 -8.86 -17.37 By element: Atomic # 1 Polarization: -3.82 SS G_CDS: -6.79 Total: -10.61 kcal Atomic # 6 Polarization: 2.04 SS G_CDS: -0.53 Total: 1.51 kcal Atomic # 7 Polarization: -0.12 SS G_CDS: -0.30 Total: -0.41 kcal Atomic # 8 Polarization: -4.75 SS G_CDS: -0.37 Total: -5.12 kcal Atomic # 14 Polarization: -1.87 SS G_CDS: -6.31 Total: -8.18 kcal Total LS contribution 5.43 Total: 5.43 kcal Total: -8.51 -8.86 -17.37 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_15766672_12335836.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -66.079 kcal (2) G-P(sol) polarization free energy of solvation -8.513 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -74.592 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.862 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.374 kcal (6) G-S(sol) free energy of system = (1) + (5) -83.454 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.52 seconds