Wall clock time and date at job start Tue Mar 9 2021 13:13:40 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 Si 1.86296 * 1 3 3 C 1.86296 * 110.07806 * 2 1 4 4 C 1.87465 * 110.01257 * 238.60628 * 2 1 3 5 5 C 1.53645 * 107.32221 * 194.01836 * 4 2 1 6 6 C 1.52022 * 110.16715 * 60.24116 * 5 4 2 7 7 N 1.46341 * 111.96808 * 288.87420 * 6 5 4 8 8 C 1.34777 * 120.52903 * 250.93470 * 7 6 5 9 9 O 1.21597 * 120.00100 * 184.92114 * 8 7 6 10 10 C 1.47581 * 120.00247 * 4.92761 * 8 7 6 11 11 C 1.36497 * 120.00780 * 75.16786 * 10 8 7 12 12 N 1.35951 * 120.50408 * 180.28087 * 11 10 8 13 13 C 1.36999 * 132.41259 * 179.73606 * 12 11 10 14 14 C 1.50701 * 126.43076 * 359.96086 * 13 12 11 15 15 O 1.42894 * 109.47188 * 29.99909 * 14 13 12 16 16 Si 1.86296 * 109.46827 * 149.99958 * 14 13 12 17 17 H 1.48500 * 109.47367 * 59.99928 * 16 14 13 18 18 H 1.48503 * 109.47212 * 179.97438 * 16 14 13 19 19 H 1.48498 * 109.47268 * 299.99864 * 16 14 13 20 20 C 1.35010 * 107.13713 * 179.97438 * 13 12 11 21 21 N 1.33585 * 108.65858 * 0.02562 * 20 13 12 22 22 C 1.32417 * 109.21971 * 359.97438 * 21 20 13 23 23 C 1.41253 * 132.11064 * 180.02562 * 22 21 20 24 24 Br 1.89095 * 120.25743 * 359.95454 * 23 22 21 25 25 C 1.35700 * 119.48777 * 179.97438 * 23 22 21 26 26 C 1.47786 * 118.93687 * 70.66715 * 7 6 5 27 27 H 1.08997 * 109.47096 * 298.60283 * 1 2 3 28 28 H 1.09006 * 109.46770 * 58.60053 * 1 2 3 29 29 H 1.08997 * 109.47445 * 178.59864 * 1 2 3 30 30 H 1.09003 * 109.47352 * 181.39066 * 3 2 1 31 31 H 1.08997 * 109.47267 * 301.39707 * 3 2 1 32 32 H 1.09007 * 109.46629 * 61.39641 * 3 2 1 33 33 H 1.08996 * 109.88693 * 313.46895 * 4 2 1 34 34 H 1.08994 * 109.88734 * 74.48923 * 4 2 1 35 35 H 1.09005 * 109.36461 * 180.53918 * 5 4 2 36 36 H 1.08998 * 109.36468 * 300.13992 * 5 4 2 37 37 H 1.08993 * 108.87358 * 168.23494 * 6 5 4 38 38 H 1.08999 * 108.91264 * 49.53697 * 6 5 4 39 39 H 1.08001 * 119.74906 * 359.97438 * 11 10 8 40 40 H 1.08998 * 109.47079 * 269.99698 * 14 13 12 41 41 H 0.96699 * 113.99997 * 59.99823 * 15 14 13 42 42 H 1.08006 * 125.66673 * 179.97438 * 20 13 12 43 43 H 1.08001 * 120.23639 * 180.02562 * 25 23 22 44 44 H 1.08999 * 110.08293 * 64.71037 * 26 7 6 45 45 H 1.08997 * 110.08275 * 186.31111 * 26 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 14 1.8630 0.0000 0.0000 3 6 2.5025 1.7497 0.0000 4 6 2.5045 -0.9176 -1.5036 5 6 3.9982 -1.1911 -1.2697 6 6 4.1866 -2.0400 -0.0228 7 7 3.9032 -1.2874 1.1999 8 6 4.9021 -0.9319 2.0320 9 8 4.6481 -0.3858 3.0883 10 6 6.3041 -1.2052 1.6611 11 6 6.9231 -0.4365 0.7181 12 7 8.2125 -0.6830 0.3647 13 6 9.0546 -0.0843 -0.5349 14 6 8.7277 1.0881 -1.4236 15 8 7.7581 1.9176 -0.7803 16 14 10.2749 2.0751 -1.7437 17 1 11.2826 1.2131 -2.4121 18 1 9.9530 3.2300 -2.6199 19 1 10.8228 2.5686 -0.4547 20 6 10.2322 -0.7419 -0.4761 21 7 10.1312 -1.7194 0.4288 22 6 8.9153 -1.7040 0.9531 23 6 8.2972 -2.5090 1.9355 24 35 9.2554 -3.9196 2.7525 25 6 7.0102 -2.2625 2.2882 26 6 2.5050 -0.9183 1.5044 27 1 -0.3633 0.4920 0.9022 28 1 -0.3633 0.5355 -0.8772 29 1 -0.3634 -1.0273 -0.0251 30 1 3.5922 1.7383 -0.0249 31 1 2.1244 2.2748 -0.8772 32 1 2.1651 2.2598 0.9023 33 1 1.9688 -1.8597 -1.6195 34 1 2.3739 -0.3049 -2.3955 35 1 4.4086 -1.7171 -2.1317 36 1 4.5235 -0.2444 -1.1429 37 1 5.2164 -2.3957 0.0093 38 1 3.5169 -2.8983 -0.0752 39 1 6.3829 0.3705 0.2457 40 1 8.3256 0.7258 -2.3697 41 1 8.0488 2.2760 0.0694 42 1 11.1098 -0.5158 -1.0637 43 1 6.5259 -2.8701 3.0382 44 1 1.9103 -1.8153 1.6774 45 1 2.4712 -0.2709 2.3806 RHF calculation, no. of doubly occupied orbitals= 62 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_22_15766672_12335884.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:13:40 Heat of formation + Delta-G solvation = -4.076384 kcal Electronic energy + Delta-G solvation = -29759.011919 eV Core-core repulsion = 25754.851514 eV Total energy + Delta-G solvation = -4004.160405 eV No. of doubly occupied orbitals = 62 Molecular weight (most abundant/longest-lived isotopes) = 411.053 amu Computer time = 0.70 seconds Orbital eigenvalues (eV) -44.21163 -41.26854 -38.56667 -38.09802 -37.60194 -35.25212 -33.59042 -32.64321 -31.80935 -30.39545 -29.57112 -28.59707 -28.11644 -26.98201 -26.93852 -24.92027 -23.95159 -23.00041 -22.38702 -20.66526 -19.43602 -18.71849 -18.15983 -17.71577 -17.62850 -17.27075 -16.58310 -16.29825 -16.03221 -15.90823 -15.80144 -15.24947 -15.12883 -14.88832 -14.60684 -14.33899 -14.22349 -14.15992 -14.03462 -13.69667 -13.46302 -13.42171 -13.33803 -13.30058 -13.17322 -12.97673 -12.82276 -12.40331 -12.30696 -12.28973 -12.18097 -11.70786 -11.41543 -11.30095 -11.23463 -11.10147 -11.00737 -10.96240 -10.62647 -9.97712 -9.48616 -9.03887 -0.79897 -0.24037 0.25587 0.79679 1.03231 1.29975 1.34776 1.43151 1.47780 1.53152 1.61786 1.65490 1.79785 1.94345 2.12885 2.34937 2.84540 2.90554 2.97877 3.30581 3.42868 3.47703 3.65081 3.82067 3.85977 4.11363 4.17401 4.20558 4.31908 4.37005 4.38629 4.43202 4.53094 4.56173 4.58788 4.59979 4.62568 4.64059 4.73450 4.86553 4.97249 4.98674 5.14865 5.25914 5.29629 5.37320 5.43392 5.62196 6.08884 6.09866 6.56260 6.91056 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.446 4.446 2 Si 0.997 3.003 3 C -0.444 4.444 4 C -0.404 4.404 5 C -0.127 4.127 6 C 0.095 3.905 7 N -0.585 5.585 8 C 0.570 3.430 9 O -0.515 6.515 10 C -0.147 4.147 11 C 0.122 3.878 12 N -0.347 5.347 13 C -0.091 4.091 14 C -0.048 4.048 15 O -0.543 6.543 16 Si 0.969 3.031 17 H -0.242 1.242 18 H -0.244 1.244 19 H -0.247 1.247 20 C 0.043 3.957 21 N -0.463 5.463 22 C 0.243 3.757 23 C -0.059 4.059 24 Br 0.009 6.991 25 C -0.032 4.032 26 C -0.182 4.182 27 H 0.072 0.928 28 H 0.073 0.927 29 H 0.072 0.928 30 H 0.068 0.932 31 H 0.072 0.928 32 H 0.071 0.929 33 H 0.080 0.920 34 H 0.081 0.919 35 H 0.079 0.921 36 H 0.067 0.933 37 H 0.082 0.918 38 H 0.083 0.917 39 H 0.184 0.816 40 H 0.127 0.873 41 H 0.380 0.620 42 H 0.190 0.810 43 H 0.158 0.842 44 H 0.080 0.920 45 H 0.104 0.896 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.290 1.089 -4.971 6.059 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.555 4.555 2 Si 1.192 2.808 3 C -0.553 4.553 4 C -0.490 4.490 5 C -0.166 4.166 6 C -0.028 4.028 7 N -0.318 5.318 8 C 0.355 3.645 9 O -0.391 6.391 10 C -0.155 4.155 11 C -0.003 4.003 12 N -0.020 5.020 13 C -0.203 4.203 14 C -0.158 4.158 15 O -0.348 6.348 16 Si 0.787 3.213 17 H -0.165 1.165 18 H -0.167 1.167 19 H -0.170 1.170 20 C -0.108 4.108 21 N -0.181 5.181 22 C -0.002 4.002 23 C -0.142 4.142 24 Br 0.095 6.905 25 C -0.059 4.059 26 C -0.350 4.350 27 H 0.091 0.909 28 H 0.092 0.908 29 H 0.091 0.909 30 H 0.087 0.913 31 H 0.091 0.909 32 H 0.090 0.910 33 H 0.099 0.901 34 H 0.099 0.901 35 H 0.097 0.903 36 H 0.086 0.914 37 H 0.100 0.900 38 H 0.102 0.898 39 H 0.201 0.799 40 H 0.145 0.855 41 H 0.228 0.772 42 H 0.207 0.793 43 H 0.176 0.824 44 H 0.098 0.902 45 H 0.122 0.878 Dipole moment (debyes) X Y Z Total from point charges -1.989 0.665 -4.608 5.063 hybrid contribution -0.878 0.489 0.191 1.023 sum -2.867 1.154 -4.417 5.391 Atomic orbital electron populations 1.26038 1.19681 1.04832 1.04914 0.79812 0.67253 0.67587 0.66107 1.26056 1.06335 1.18116 1.04748 1.26224 0.99912 1.08521 1.14387 1.21469 0.97100 1.00674 0.97311 1.21505 1.02894 0.94834 0.83569 1.47827 1.06507 1.55362 1.22115 1.17716 0.83658 0.79246 0.83845 1.90866 1.83555 1.42005 1.22632 1.19307 0.96267 0.99676 1.00247 1.21937 0.83104 0.99841 0.95459 1.42518 1.09475 1.22862 1.27137 1.22001 0.91940 1.04417 1.01908 1.24807 1.04933 0.89753 0.96347 1.86467 1.42385 1.66563 1.39384 0.85443 0.74070 0.79541 0.82210 1.16523 1.16720 1.17000 1.22494 0.96889 0.93335 0.98121 1.70860 1.14038 1.21795 1.11393 1.20391 0.89437 0.91613 0.98801 1.20460 0.95065 0.98874 0.99778 1.96856 1.74760 1.40822 1.78107 1.20987 0.91617 0.95405 0.97861 1.26946 0.84131 1.07783 1.16137 0.90868 0.90781 0.90921 0.91330 0.90915 0.90958 0.90128 0.90065 0.90255 0.91442 0.89956 0.89827 0.79899 0.85549 0.77196 0.79348 0.82440 0.90154 0.87755 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.45 1.34 8.65 101.05 0.87 2.22 16 2 Si 1.00 -3.75 11.99 -169.99 -2.04 -5.79 16 3 C -0.44 0.91 8.65 101.05 0.87 1.79 16 4 C -0.40 1.50 5.03 37.49 0.19 1.69 16 5 C -0.13 0.43 5.67 -26.89 -0.15 0.27 16 6 C 0.09 -0.26 5.48 -4.63 -0.03 -0.29 16 7 N -0.59 0.53 2.63 -113.15 -0.30 0.23 16 8 C 0.57 0.86 7.07 -12.45 -0.09 0.77 16 9 O -0.52 -2.72 16.56 5.28 0.09 -2.63 16 10 C -0.15 -0.08 3.73 -105.37 -0.39 -0.47 16 11 C 0.12 -0.03 9.67 -16.35 -0.16 -0.19 16 12 N -0.35 -0.34 2.93 -58.09 -0.17 -0.52 16 13 C -0.09 0.01 6.24 -81.43 -0.51 -0.50 16 14 C -0.05 0.13 3.06 36.01 0.11 0.24 16 15 O -0.54 1.29 10.90 -35.23 -0.38 0.91 16 16 Si 0.97 -2.57 26.60 -169.99 -4.52 -7.09 16 17 H -0.24 0.64 6.84 56.52 0.39 1.03 16 18 H -0.24 0.36 7.11 56.52 0.40 0.76 16 19 H -0.25 0.35 7.11 56.52 0.40 0.75 16 20 C 0.04 0.05 10.44 -17.94 -0.19 -0.14 16 21 N -0.46 -1.80 11.30 -12.70 -0.14 -1.94 16 22 C 0.24 0.73 7.59 -155.92 -1.18 -0.45 16 23 C -0.06 -0.13 6.24 -39.35 -0.25 -0.38 16 24 Br 0.01 0.02 33.72 -68.01 -2.29 -2.27 16 25 C -0.03 -0.03 9.54 -39.15 -0.37 -0.40 16 26 C -0.18 0.31 5.43 60.55 0.33 0.64 16 27 H 0.07 -0.20 7.96 -51.93 -0.41 -0.61 16 28 H 0.07 -0.21 7.96 -51.93 -0.41 -0.63 16 29 H 0.07 -0.23 7.96 -51.93 -0.41 -0.64 16 30 H 0.07 -0.10 7.96 -51.93 -0.41 -0.52 16 31 H 0.07 -0.16 7.96 -51.93 -0.41 -0.58 16 32 H 0.07 -0.11 7.96 -51.92 -0.41 -0.52 16 33 H 0.08 -0.32 7.99 -51.93 -0.41 -0.74 16 34 H 0.08 -0.30 7.99 -51.93 -0.41 -0.71 16 35 H 0.08 -0.28 8.14 -51.93 -0.42 -0.71 16 36 H 0.07 -0.22 7.90 -51.93 -0.41 -0.63 16 37 H 0.08 -0.21 6.24 -51.93 -0.32 -0.53 16 38 H 0.08 -0.31 8.10 -51.93 -0.42 -0.73 16 39 H 0.18 -0.34 6.69 -52.49 -0.35 -0.69 16 40 H 0.13 -0.49 7.96 -51.93 -0.41 -0.91 16 41 H 0.38 -1.69 8.70 45.56 0.40 -1.30 16 42 H 0.19 -0.30 6.72 -52.48 -0.35 -0.65 16 43 H 0.16 -0.06 8.06 -52.49 -0.42 -0.48 16 44 H 0.08 -0.21 8.00 -51.93 -0.42 -0.62 16 45 H 0.10 -0.01 6.93 -51.93 -0.36 -0.37 16 LS Contribution 387.38 15.07 5.84 5.84 Total: 0.00 -8.01 387.38 -10.48 -18.49 By element: Atomic # 1 Polarization: -4.41 SS G_CDS: -5.62 Total: -10.03 kcal Atomic # 6 Polarization: 5.73 SS G_CDS: -0.94 Total: 4.79 kcal Atomic # 7 Polarization: -1.61 SS G_CDS: -0.61 Total: -2.22 kcal Atomic # 8 Polarization: -1.42 SS G_CDS: -0.30 Total: -1.72 kcal Atomic # 14 Polarization: -6.32 SS G_CDS: -6.56 Total: -12.89 kcal Atomic # 35 Polarization: 0.02 SS G_CDS: -2.29 Total: -2.27 kcal Total LS contribution 5.84 Total: 5.84 kcal Total: -8.01 -10.48 -18.49 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_15766672_12335884.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 14.418 kcal (2) G-P(sol) polarization free energy of solvation -8.013 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 6.405 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.482 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.495 kcal (6) G-S(sol) free energy of system = (1) + (5) -4.076 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.70 seconds