Wall clock time and date at job start Tue Mar 9 2021 13:24:45 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 Si 1.86293 * 1 3 3 C 1.86306 * 110.07927 * 2 1 4 4 C 1.87469 * 110.01493 * 121.39262 * 2 1 3 5 5 C 1.53648 * 107.32489 * 165.98422 * 4 2 1 6 6 C 1.52513 * 110.11933 * 299.66129 * 5 4 2 7 7 N 1.46343 * 111.68982 * 71.27020 * 6 5 4 8 8 C 1.34777 * 120.53395 * 109.12658 * 7 6 5 9 9 O 1.21589 * 119.99963 * 175.29764 * 8 7 6 10 10 C 1.47533 * 119.99869 * 355.29629 * 8 7 6 11 11 C 1.39670 * 120.19376 * 310.01982 * 10 8 7 12 12 C 1.37824 * 119.91173 * 179.97438 * 11 10 8 13 13 C 1.38509 * 120.30032 * 0.02562 * 12 11 10 14 14 C 1.50693 * 119.80700 * 179.97438 * 13 12 11 15 15 O 1.42901 * 109.47242 * 119.99990 * 14 13 12 16 16 Si 1.86300 * 109.47352 * 359.97438 * 14 13 12 17 17 H 1.48499 * 109.47074 * 60.00091 * 16 14 13 18 18 H 1.48500 * 109.47272 * 180.02562 * 16 14 13 19 19 H 1.48510 * 109.46936 * 300.00199 * 16 14 13 20 20 C 1.38103 * 120.38673 * 0.02562 * 13 12 11 21 21 C 1.38668 * 120.08510 * 359.67488 * 20 13 12 22 22 O 1.35652 * 120.15158 * 180.31739 * 21 20 13 23 23 C 1.47797 * 118.93324 * 289.09983 * 7 6 5 24 24 H 1.09005 * 109.47201 * 298.60769 * 1 2 3 25 25 H 1.08998 * 109.46977 * 58.60534 * 1 2 3 26 26 H 1.08994 * 109.47515 * 178.60878 * 1 2 3 27 27 H 1.08998 * 109.47518 * 181.39683 * 3 2 1 28 28 H 1.09007 * 109.46200 * 301.39299 * 3 2 1 29 29 H 1.09002 * 109.46898 * 61.38823 * 3 2 1 30 30 H 1.08998 * 109.88273 * 46.52960 * 4 2 1 31 31 H 1.09000 * 109.94412 * 285.47475 * 4 2 1 32 32 H 1.08998 * 109.36138 * 59.85842 * 5 4 2 33 33 H 1.08997 * 109.35865 * 179.46376 * 5 4 2 34 34 H 1.08996 * 109.03393 * 191.83536 * 6 5 4 35 35 H 1.08999 * 109.03649 * 310.69733 * 6 5 4 36 36 H 1.08006 * 120.04522 * 359.97438 * 11 10 8 37 37 H 1.08002 * 119.85521 * 180.02562 * 12 11 10 38 38 H 1.09003 * 109.46995 * 239.99547 * 14 13 12 39 39 H 0.96703 * 113.99533 * 299.99195 * 15 14 13 40 40 H 1.08001 * 119.95521 * 179.97438 * 20 13 12 41 41 H 0.96691 * 114.00379 * 270.28411 * 22 21 20 42 42 H 1.08997 * 110.07768 * 295.54797 * 23 7 6 43 43 H 1.08994 * 110.16976 * 173.98981 * 23 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 14 1.8629 0.0000 0.0000 3 6 2.5026 1.7498 0.0000 4 6 2.5046 -0.9175 1.5036 5 6 3.9983 -1.1910 1.2698 6 6 4.1860 -2.0447 0.0200 7 7 3.9033 -1.2873 -1.1999 8 6 4.9020 -0.9325 -2.0324 9 8 4.6484 -0.3787 -3.0847 10 6 6.3030 -1.2160 -1.6669 11 6 6.7884 -0.8510 -0.4091 12 6 8.0980 -1.1192 -0.0735 13 6 8.9363 -1.7491 -0.9784 14 6 10.3664 -2.0364 -0.6001 15 8 10.6011 -3.4448 -0.6594 16 14 10.6857 -1.4254 1.1306 17 1 9.7747 -2.1188 2.0764 18 1 12.0952 -1.7079 1.5033 19 1 10.4420 0.0383 1.1917 20 6 8.4696 -2.1145 -2.2258 21 6 7.1531 -1.8580 -2.5779 22 8 6.6915 -2.2221 -3.8004 23 6 2.5050 -0.9183 -1.5045 24 1 -0.3634 0.4921 0.9022 25 1 -0.3633 0.5353 -0.8772 26 1 -0.3634 -1.0273 -0.0249 27 1 3.5922 1.7384 -0.0251 28 1 2.1244 2.2747 -0.8773 29 1 2.1651 2.2600 0.9022 30 1 1.9688 -1.8597 1.6195 31 1 2.3749 -0.3053 2.3961 32 1 4.5235 -0.2443 1.1429 33 1 4.4086 -1.7170 2.1317 34 1 5.2148 -2.4032 -0.0145 35 1 3.5139 -2.9014 0.0704 36 1 6.1384 -0.3592 0.2995 37 1 8.4723 -0.8369 0.8994 38 1 11.0352 -1.5271 -1.2940 39 1 10.0396 -3.9623 -0.0661 40 1 9.1295 -2.6049 -2.9261 41 1 6.8015 -1.5436 -4.4805 42 1 1.9104 -1.8153 -1.6773 43 1 2.4694 -0.2715 -2.3811 RHF calculation, no. of doubly occupied orbitals= 55 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_22_15766672_13422076.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:24:45 Heat of formation + Delta-G solvation = -117.122104 kcal Electronic energy + Delta-G solvation = -24389.187704 eV Core-core repulsion = 20944.102801 eV Total energy + Delta-G solvation = -3445.084902 eV No. of doubly occupied orbitals = 55 Molecular weight (most abundant/longest-lived isotopes) = 309.135 amu Computer time = 0.58 seconds Orbital eigenvalues (eV) -41.75723 -40.01041 -38.53075 -37.50521 -37.00672 -33.45854 -32.93336 -31.15362 -29.56425 -28.56306 -28.44937 -27.39181 -26.10785 -23.97922 -23.20797 -22.74577 -20.53098 -19.24152 -18.56659 -18.32373 -17.41743 -17.03826 -16.49019 -16.31515 -16.13416 -15.98085 -15.44847 -15.41702 -14.86041 -14.75817 -14.47982 -14.19592 -14.10932 -14.01896 -13.90564 -13.60772 -13.38722 -13.25797 -13.22292 -13.07266 -12.94817 -12.47205 -12.30275 -12.28393 -12.18215 -12.07097 -11.60535 -11.51234 -11.01046 -10.80581 -10.59056 -10.57158 -10.00506 -9.80753 -9.30252 -0.29119 0.09894 1.02308 1.33273 1.39885 1.42725 1.62598 1.68407 1.76156 1.81570 2.05620 2.38561 2.45393 3.10153 3.29421 3.40467 3.50329 3.74058 3.76313 3.92047 3.92989 4.18291 4.31759 4.37220 4.43180 4.49462 4.57393 4.62237 4.63699 4.64862 4.66593 4.67545 4.71801 4.79864 4.95182 4.99651 5.02368 5.13189 5.19837 5.20833 5.37083 5.46035 5.46852 5.54375 6.33628 6.42524 6.63692 7.18278 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.446 4.446 2 Si 0.996 3.004 3 C -0.444 4.444 4 C -0.403 4.403 5 C -0.129 4.129 6 C 0.091 3.909 7 N -0.590 5.590 8 C 0.565 3.435 9 O -0.530 6.530 10 C -0.153 4.153 11 C -0.072 4.072 12 C -0.141 4.141 13 C -0.083 4.083 14 C -0.085 4.085 15 O -0.535 6.535 16 Si 0.950 3.050 17 H -0.249 1.249 18 H -0.252 1.252 19 H -0.249 1.249 20 C -0.120 4.120 21 C 0.159 3.841 22 O -0.490 6.490 23 C -0.181 4.181 24 H 0.073 0.927 25 H 0.072 0.928 26 H 0.071 0.929 27 H 0.067 0.933 28 H 0.071 0.929 29 H 0.071 0.929 30 H 0.080 0.920 31 H 0.080 0.920 32 H 0.068 0.932 33 H 0.080 0.920 34 H 0.089 0.911 35 H 0.079 0.921 36 H 0.139 0.861 37 H 0.130 0.870 38 H 0.122 0.878 39 H 0.378 0.622 40 H 0.142 0.858 41 H 0.402 0.598 42 H 0.076 0.924 43 H 0.101 0.899 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.392 0.174 5.003 5.022 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.554 4.554 2 Si 1.191 2.809 3 C -0.552 4.552 4 C -0.490 4.490 5 C -0.168 4.168 6 C -0.032 4.032 7 N -0.323 5.323 8 C 0.353 3.647 9 O -0.407 6.407 10 C -0.157 4.157 11 C -0.090 4.090 12 C -0.159 4.159 13 C -0.084 4.084 14 C -0.196 4.196 15 O -0.340 6.340 16 Si 0.773 3.227 17 H -0.172 1.172 18 H -0.176 1.176 19 H -0.172 1.172 20 C -0.139 4.139 21 C 0.113 3.887 22 O -0.302 6.302 23 C -0.349 4.349 24 H 0.092 0.908 25 H 0.091 0.909 26 H 0.091 0.909 27 H 0.086 0.914 28 H 0.090 0.910 29 H 0.090 0.910 30 H 0.099 0.901 31 H 0.099 0.901 32 H 0.086 0.914 33 H 0.099 0.901 34 H 0.108 0.892 35 H 0.097 0.903 36 H 0.157 0.843 37 H 0.147 0.853 38 H 0.140 0.860 39 H 0.225 0.775 40 H 0.160 0.840 41 H 0.261 0.739 42 H 0.094 0.906 43 H 0.120 0.880 Dipole moment (debyes) X Y Z Total from point charges -0.077 0.415 5.073 5.090 hybrid contribution -0.412 0.046 -0.380 0.562 sum -0.489 0.461 4.693 4.741 Atomic orbital electron populations 1.26035 1.19750 1.04791 1.04836 0.79823 0.67165 0.67549 0.66354 1.26055 1.06309 1.18220 1.04645 1.26213 1.00041 1.08507 1.14225 1.21643 0.97014 1.00566 0.97546 1.21675 1.03341 0.94599 0.83559 1.47742 1.06422 1.55605 1.22498 1.18112 0.84548 0.78660 0.83336 1.90775 1.84101 1.42654 1.23187 1.20345 0.94954 1.04005 0.96371 1.21292 0.95710 0.97614 0.94400 1.20986 0.93913 1.01224 0.99742 1.20389 0.96503 0.97576 0.93912 1.25083 0.94231 0.86822 1.13423 1.86545 1.64117 1.15676 1.67695 0.85663 0.81449 0.80771 0.74863 1.17244 1.17559 1.17232 1.21285 0.94287 1.01008 0.97304 1.18418 0.90290 0.93572 0.86390 1.84691 1.83641 1.44420 1.17410 1.26873 0.84650 1.07498 1.15854 0.90831 0.90916 0.90945 0.91398 0.90991 0.90990 0.90130 0.90138 0.91394 0.90122 0.89232 0.90277 0.84349 0.85297 0.85976 0.77495 0.83998 0.73911 0.90590 0.88022 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.45 0.98 8.65 101.05 0.87 1.85 16 2 Si 1.00 -2.72 11.99 -169.99 -2.04 -4.76 16 3 C -0.44 0.50 8.65 101.05 0.87 1.37 16 4 C -0.40 1.24 5.02 37.49 0.19 1.43 16 5 C -0.13 0.37 5.17 -26.64 -0.14 0.24 16 6 C 0.09 -0.13 4.99 -4.38 -0.02 -0.16 16 7 N -0.59 -0.60 2.63 -112.89 -0.30 -0.90 16 8 C 0.57 2.07 6.92 -12.47 -0.09 1.98 16 9 O -0.53 -3.68 16.04 -2.64 -0.04 -3.72 16 10 C -0.15 -0.30 4.73 -104.85 -0.50 -0.80 16 11 C -0.07 0.02 7.66 -39.20 -0.30 -0.28 16 12 C -0.14 0.14 8.65 -39.63 -0.34 -0.20 16 13 C -0.08 0.05 5.39 -104.57 -0.56 -0.52 16 14 C -0.09 0.13 2.81 36.00 0.10 0.23 16 15 O -0.54 0.37 12.76 -35.23 -0.45 -0.08 16 16 Si 0.95 -1.76 25.05 -169.99 -4.26 -6.02 16 17 H -0.25 0.50 7.11 56.52 0.40 0.90 16 18 H -0.25 0.04 7.11 56.52 0.40 0.44 16 19 H -0.25 0.34 7.11 56.52 0.40 0.74 16 20 C -0.12 -0.07 9.53 -39.47 -0.38 -0.45 16 21 C 0.16 0.34 6.70 -38.69 -0.26 0.08 16 22 O -0.49 -1.36 12.59 -26.58 -0.33 -1.69 16 23 C -0.18 -0.01 5.42 60.56 0.33 0.32 16 24 H 0.07 -0.17 7.96 -51.93 -0.41 -0.58 16 25 H 0.07 -0.14 7.96 -51.93 -0.41 -0.55 16 26 H 0.07 -0.17 7.96 -51.93 -0.41 -0.58 16 27 H 0.07 -0.03 7.96 -51.93 -0.41 -0.44 16 28 H 0.07 -0.04 7.96 -51.93 -0.41 -0.45 16 29 H 0.07 -0.12 7.96 -51.93 -0.41 -0.53 16 30 H 0.08 -0.27 7.99 -51.93 -0.41 -0.68 16 31 H 0.08 -0.26 7.99 -51.93 -0.41 -0.68 16 32 H 0.07 -0.21 6.21 -51.93 -0.32 -0.53 16 33 H 0.08 -0.30 8.14 -51.93 -0.42 -0.73 16 34 H 0.09 -0.14 5.34 -51.93 -0.28 -0.41 16 35 H 0.08 -0.17 8.11 -51.93 -0.42 -0.59 16 36 H 0.14 -0.30 5.31 -52.48 -0.28 -0.58 16 37 H 0.13 -0.34 4.85 -52.49 -0.25 -0.60 16 38 H 0.12 -0.28 7.96 -51.93 -0.41 -0.69 16 39 H 0.38 -1.48 8.70 45.56 0.40 -1.08 16 40 H 0.14 0.02 8.06 -52.49 -0.42 -0.41 16 41 H 0.40 -0.15 9.06 45.56 0.41 0.26 16 42 H 0.08 -0.05 8.00 -51.93 -0.42 -0.47 16 43 H 0.10 0.18 6.94 -51.93 -0.36 -0.18 16 LS Contribution 343.12 15.07 5.17 5.17 Total: 0.00 -7.98 343.12 -7.35 -15.33 By element: Atomic # 1 Polarization: -3.54 SS G_CDS: -4.89 Total: -8.43 kcal Atomic # 6 Polarization: 5.32 SS G_CDS: -0.22 Total: 5.10 kcal Atomic # 7 Polarization: -0.60 SS G_CDS: -0.30 Total: -0.90 kcal Atomic # 8 Polarization: -4.67 SS G_CDS: -0.83 Total: -5.49 kcal Atomic # 14 Polarization: -4.49 SS G_CDS: -6.30 Total: -10.78 kcal Total LS contribution 5.17 Total: 5.17 kcal Total: -7.98 -7.35 -15.33 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_15766672_13422076.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -101.788 kcal (2) G-P(sol) polarization free energy of solvation -7.982 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -109.769 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.353 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.334 kcal (6) G-S(sol) free energy of system = (1) + (5) -117.122 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.58 seconds