Wall clock time and date at job start Tue Mar 9 2021 13:30:20 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42901 * 1 3 3 C 1.35999 * 116.99494 * 2 1 4 4 C 1.39103 * 120.06294 * 179.97438 * 3 2 1 5 5 O 1.36019 * 120.07992 * 0.03324 * 4 3 2 6 6 C 1.42898 * 117.00573 * 89.99146 * 5 4 3 7 7 C 1.53002 * 109.47108 * 270.00457 * 6 5 4 8 8 C 1.50696 * 109.47462 * 150.00419 * 6 5 4 9 9 O 1.21282 * 119.99767 * 5.00005 * 8 6 5 10 10 N 1.34776 * 120.00108 * 185.00526 * 8 6 5 11 11 C 1.46335 * 120.53142 * 359.97438 * 10 8 6 12 12 C 1.52509 * 111.69021 * 250.87135 * 11 10 8 13 13 C 1.53641 * 110.12533 * 288.73467 * 12 11 10 14 14 Si 1.87460 * 107.32221 * 60.33705 * 13 12 11 15 15 C 1.86297 * 110.01475 * 72.58853 * 14 13 12 16 16 C 1.86300 * 110.01385 * 194.01645 * 14 13 12 17 17 C 1.47791 * 120.53388 * 179.97438 * 10 8 6 18 18 C 1.38671 * 119.84589 * 180.29858 * 4 3 2 19 19 Cl 1.73601 * 120.00994 * 179.70841 * 18 4 3 20 20 C 1.38329 * 119.97439 * 359.45097 * 18 4 3 21 21 C 1.38256 * 120.13878 * 0.53557 * 20 18 4 22 22 C 1.50690 * 119.92466 * 179.74302 * 21 20 18 23 23 O 1.42900 * 109.47403 * 120.02262 * 22 21 20 24 24 Si 1.86298 * 109.47530 * 0.02562 * 22 21 20 25 25 H 1.48503 * 109.47405 * 180.02562 * 24 22 21 26 26 H 1.48498 * 109.46927 * 300.00241 * 24 22 21 27 27 H 1.48495 * 109.47049 * 59.99797 * 24 22 21 28 28 C 1.38238 * 120.14950 * 359.75979 * 21 20 18 29 29 H 1.09004 * 109.46851 * 179.97438 * 1 2 3 30 30 H 1.08995 * 109.47551 * 299.99945 * 1 2 3 31 31 H 1.09004 * 109.47321 * 60.00023 * 1 2 3 32 32 H 1.09009 * 109.46860 * 30.00173 * 6 5 4 33 33 H 1.08999 * 109.47005 * 60.00017 * 7 6 5 34 34 H 1.09004 * 109.46941 * 179.97438 * 7 6 5 35 35 H 1.08992 * 109.47001 * 299.99543 * 7 6 5 36 36 H 1.09009 * 109.03971 * 130.30441 * 11 10 8 37 37 H 1.08995 * 109.03882 * 11.44439 * 11 10 8 38 38 H 1.09000 * 109.36223 * 168.53577 * 12 11 10 39 39 H 1.09005 * 109.25343 * 48.86881 * 12 11 10 40 40 H 1.09003 * 109.88802 * 300.88576 * 13 12 11 41 41 H 1.08997 * 109.95004 * 179.82370 * 13 12 11 42 42 H 1.08998 * 109.47672 * 59.99747 * 15 14 13 43 43 H 1.09004 * 109.47326 * 180.02562 * 15 14 13 44 44 H 1.09005 * 109.46940 * 299.99563 * 15 14 13 45 45 H 1.09000 * 109.47168 * 60.00315 * 16 14 13 46 46 H 1.09005 * 109.47394 * 179.97438 * 16 14 13 47 47 H 1.09000 * 109.47161 * 300.00056 * 16 14 13 48 48 H 1.09003 * 110.07651 * 6.09003 * 17 10 8 49 49 H 1.08994 * 110.08310 * 244.48134 * 17 10 8 50 50 H 1.08002 * 119.93079 * 180.29298 * 20 18 4 51 51 H 1.09004 * 109.47040 * 240.01829 * 22 21 20 52 52 H 0.96698 * 114.00826 * 179.97438 * 23 22 21 53 53 H 1.07994 * 119.98729 * 179.97438 * 28 21 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0463 1.2118 0.0000 4 6 3.4354 1.2863 0.0005 5 8 4.1791 0.1474 0.0004 6 6 4.5342 -0.3955 -1.2729 7 6 3.4532 -1.3779 -1.7279 8 6 5.8531 -1.1160 -1.1617 9 8 6.3877 -1.2387 -0.0800 10 7 6.4386 -1.6240 -2.2642 11 6 5.8036 -1.4830 -3.5751 12 6 5.2648 -2.8149 -4.0865 13 6 6.4270 -3.7370 -4.4861 14 14 7.4708 -4.0152 -2.9541 15 6 6.5762 -5.1399 -1.7686 16 6 9.1116 -4.7600 -3.4272 17 6 7.7322 -2.3323 -2.1688 18 6 4.0601 2.5242 0.0068 19 17 5.7934 2.6221 0.0152 20 6 3.3018 3.6811 0.0010 21 6 1.9212 3.6062 0.0002 22 6 1.0998 4.8695 -0.0003 23 8 0.2757 4.9015 -1.1673 24 14 2.2338 6.3477 -0.0003 25 1 1.4243 7.5927 -0.0001 26 1 3.0902 6.3145 1.2124 27 1 3.0908 6.3140 -1.2126 28 6 1.2927 2.3750 0.0001 29 1 -0.3633 -1.0277 -0.0005 30 1 -0.3634 0.5138 0.8899 31 1 -0.3634 0.5138 -0.8900 32 1 4.6213 0.4116 -2.0005 33 1 2.4992 -0.8567 -1.8084 34 1 3.7238 -1.7917 -2.6993 35 1 3.3661 -2.1848 -1.0004 36 1 6.5359 -1.0994 -4.2856 37 1 4.9804 -0.7729 -3.4969 38 1 4.6289 -2.6384 -4.9540 39 1 4.6792 -3.2916 -3.3002 40 1 7.0270 -3.2620 -5.2624 41 1 6.0389 -4.6890 -4.8482 42 1 6.3851 -6.0984 -2.2510 43 1 7.1903 -5.2952 -0.8815 44 1 5.6295 -4.6836 -1.4792 45 1 9.6372 -4.0832 -4.1009 46 1 9.7112 -4.9176 -2.5306 47 1 8.9468 -5.7146 -3.9269 48 1 8.0193 -2.4478 -1.1236 49 1 8.5011 -1.7819 -2.7108 50 1 3.7891 4.6449 0.0011 51 1 0.4707 4.8942 0.8895 52 1 -0.2820 5.6887 -1.2336 53 1 0.2142 2.3195 -0.0002 RHF calculation, no. of doubly occupied orbitals= 70 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_15766672_13428712.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:30:20 Heat of formation + Delta-G solvation = -138.535359 kcal Electronic energy + Delta-G solvation = -35413.196774 eV Core-core repulsion = 30822.088482 eV Total energy + Delta-G solvation = -4591.108292 eV No. of doubly occupied orbitals = 70 Molecular weight (most abundant/longest-lived isotopes) = 401.143 amu Computer time = 1.22 seconds Orbital eigenvalues (eV) -42.05380 -41.14749 -39.29447 -39.00286 -37.84901 -37.55289 -36.99355 -33.40135 -33.34965 -31.63438 -31.40452 -29.37908 -28.54637 -28.41834 -27.86947 -27.06742 -26.50491 -24.63546 -23.63955 -22.80483 -22.58878 -20.30530 -19.64248 -18.74549 -18.50720 -18.19264 -17.99017 -17.49282 -16.79370 -16.78164 -16.51093 -16.10367 -15.97688 -15.83474 -15.40286 -15.23773 -14.93218 -14.68991 -14.62935 -14.34318 -14.19551 -14.09694 -13.96219 -13.89612 -13.76040 -13.48309 -13.45695 -13.25381 -13.18806 -13.13017 -12.97689 -12.79727 -12.73571 -12.66805 -12.43127 -12.23948 -12.12614 -12.03711 -12.00906 -11.93665 -11.74500 -11.50739 -11.33797 -10.87359 -10.65981 -10.41427 -10.33664 -9.87038 -9.43444 -9.33920 -0.37259 -0.07224 0.78512 1.10357 1.36482 1.42610 1.47481 1.52471 1.72422 1.89085 1.89636 1.98134 2.15438 2.20211 2.56114 2.61668 3.23416 3.34173 3.63619 3.68264 3.71401 3.76918 3.91688 3.94718 4.00575 4.08832 4.10593 4.28635 4.39241 4.44387 4.45071 4.46729 4.52697 4.62912 4.66789 4.70245 4.72096 4.74155 4.76019 4.79025 4.81582 4.83987 4.87393 4.96961 5.04908 5.06717 5.13509 5.20358 5.32132 5.39664 5.48227 5.59495 5.61969 5.90186 6.21917 6.37386 6.80299 7.06776 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.011 3.989 2 O -0.312 6.312 3 C 0.130 3.870 4 C 0.049 3.951 5 O -0.308 6.308 6 C 0.075 3.925 7 C -0.173 4.173 8 C 0.507 3.493 9 O -0.568 6.568 10 N -0.589 5.589 11 C 0.079 3.921 12 C -0.133 4.133 13 C -0.397 4.397 14 Si 1.062 2.938 15 C -0.465 4.465 16 C -0.453 4.453 17 C -0.206 4.206 18 C -0.024 4.024 19 Cl -0.054 7.054 20 C -0.151 4.151 21 C -0.026 4.026 22 C -0.072 4.072 23 O -0.555 6.555 24 Si 0.957 3.043 25 H -0.244 1.244 26 H -0.262 1.262 27 H -0.269 1.269 28 C -0.157 4.157 29 H 0.119 0.881 30 H 0.069 0.931 31 H 0.074 0.926 32 H 0.096 0.904 33 H 0.084 0.916 34 H 0.107 0.893 35 H 0.059 0.941 36 H 0.098 0.902 37 H 0.094 0.906 38 H 0.101 0.899 39 H 0.067 0.933 40 H 0.094 0.906 41 H 0.091 0.909 42 H 0.079 0.921 43 H 0.056 0.944 44 H 0.055 0.945 45 H 0.078 0.922 46 H 0.064 0.936 47 H 0.079 0.921 48 H 0.072 0.928 49 H 0.085 0.915 50 H 0.142 0.858 51 H 0.113 0.887 52 H 0.403 0.597 53 H 0.170 0.830 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.384 1.005 -7.367 10.479 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.082 4.082 2 O -0.225 6.225 3 C 0.083 3.917 4 C 0.004 3.996 5 O -0.224 6.224 6 C 0.016 3.984 7 C -0.230 4.230 8 C 0.295 3.705 9 O -0.447 6.447 10 N -0.323 5.323 11 C -0.043 4.043 12 C -0.171 4.171 13 C -0.485 4.485 14 Si 1.253 2.747 15 C -0.571 4.571 16 C -0.562 4.562 17 C -0.371 4.371 18 C -0.052 4.052 19 Cl -0.025 7.025 20 C -0.170 4.170 21 C -0.027 4.027 22 C -0.182 4.182 23 O -0.365 6.365 24 Si 0.781 3.219 25 H -0.167 1.167 26 H -0.187 1.187 27 H -0.193 1.193 28 C -0.176 4.176 29 H 0.137 0.863 30 H 0.087 0.913 31 H 0.093 0.907 32 H 0.114 0.886 33 H 0.103 0.897 34 H 0.125 0.875 35 H 0.078 0.922 36 H 0.116 0.884 37 H 0.112 0.888 38 H 0.120 0.880 39 H 0.086 0.914 40 H 0.113 0.887 41 H 0.109 0.891 42 H 0.098 0.902 43 H 0.075 0.925 44 H 0.074 0.926 45 H 0.097 0.903 46 H 0.083 0.917 47 H 0.098 0.902 48 H 0.091 0.909 49 H 0.103 0.897 50 H 0.159 0.841 51 H 0.131 0.869 52 H 0.255 0.745 53 H 0.188 0.812 Dipole moment (debyes) X Y Z Total from point charges -5.961 0.847 -6.701 9.009 hybrid contribution -0.079 0.517 0.665 0.846 sum -6.040 1.363 -6.036 8.648 Atomic orbital electron populations 1.23499 0.75813 1.06011 1.02916 1.86224 1.23699 1.24918 1.87653 1.19188 0.90238 0.86349 0.95967 1.17789 0.87610 0.85212 1.09008 1.86250 1.69974 1.38075 1.28145 1.22310 0.93230 0.97309 0.85546 1.22546 0.98180 0.99109 1.03160 1.20645 0.86351 0.79170 0.84334 1.90688 1.65798 1.59345 1.28835 1.47891 1.21616 1.55459 1.07289 1.22036 0.99528 0.99626 0.83086 1.21690 0.98720 0.94373 1.02287 1.26120 1.05724 1.03371 1.13311 0.78857 0.67178 0.62269 0.66436 1.26347 1.07930 1.11359 1.11421 1.26123 1.16612 1.07735 1.05704 1.27341 0.86244 1.14879 1.08609 1.21040 0.85666 0.93772 1.04672 1.98404 1.08965 1.98488 1.96665 1.20859 0.93592 0.97139 1.05369 1.19291 0.91620 0.95302 0.96478 1.24581 0.99782 1.01182 0.92701 1.86433 1.58962 1.49370 1.41717 0.85577 0.79017 0.76923 0.80357 1.16713 1.18656 1.19329 1.21337 1.01998 0.89660 1.04594 0.86301 0.91262 0.90734 0.88624 0.89745 0.87485 0.92202 0.88409 0.88758 0.88045 0.91412 0.88743 0.89058 0.90174 0.92456 0.92581 0.90257 0.91686 0.90197 0.90935 0.89675 0.84104 0.86921 0.74533 0.81227 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.06 9.81 113.37 1.11 1.05 16 2 O -0.31 -1.06 8.19 -79.66 -0.65 -1.71 16 3 C 0.13 0.68 6.54 22.56 0.15 0.83 16 4 C 0.05 0.50 5.56 22.58 0.13 0.62 16 5 O -0.31 -4.30 8.48 -67.37 -0.57 -4.87 16 6 C 0.07 0.59 2.36 29.85 0.07 0.66 16 7 C -0.17 -0.36 8.69 71.98 0.63 0.27 16 8 C 0.51 5.98 7.12 87.66 0.62 6.60 16 9 O -0.57 -12.41 15.94 15.95 0.25 -12.16 16 10 N -0.59 -2.39 2.63 -625.85 -1.64 -4.04 16 11 C 0.08 -0.31 4.95 86.25 0.43 0.12 16 12 C -0.13 0.91 4.77 30.65 0.15 1.05 16 13 C -0.40 3.00 5.03 72.20 0.36 3.36 16 14 Si 1.06 -4.48 11.99 68.60 0.82 -3.65 16 15 C -0.46 -0.45 8.65 113.37 0.98 0.53 16 16 C -0.45 1.77 8.65 113.37 0.98 2.75 16 17 C -0.21 -0.59 5.43 127.52 0.69 0.10 16 18 C -0.02 -0.23 6.33 22.39 0.14 -0.08 16 19 Cl -0.05 -0.63 28.50 -2.72 -0.08 -0.70 16 20 C -0.15 -0.80 8.45 22.30 0.19 -0.61 16 21 C -0.03 -0.04 5.42 -19.86 -0.11 -0.15 16 22 C -0.07 0.30 2.81 71.23 0.20 0.50 16 23 O -0.56 2.69 12.74 -148.98 -1.90 0.79 16 24 Si 0.96 -2.14 25.06 68.60 1.72 -0.42 16 25 H -0.24 0.86 7.11 99.48 0.71 1.57 16 26 H -0.26 -0.13 7.11 99.48 0.71 0.58 16 27 H -0.27 -0.51 7.11 99.48 0.71 0.20 16 28 C -0.16 -0.15 8.60 22.35 0.19 0.05 16 29 H 0.12 -0.97 8.14 -2.38 -0.02 -0.99 16 30 H 0.07 -0.49 7.66 -2.39 -0.02 -0.51 16 31 H 0.07 -0.60 7.66 -2.38 -0.02 -0.62 16 32 H 0.10 0.44 7.09 -2.38 -0.02 0.42 16 33 H 0.08 0.09 6.28 -2.39 -0.01 0.07 16 34 H 0.11 -0.39 3.61 -2.39 -0.01 -0.40 16 35 H 0.06 0.33 8.14 -2.39 -0.02 0.31 16 36 H 0.10 -0.69 8.11 -2.38 -0.02 -0.71 16 37 H 0.09 -0.53 4.85 -2.39 -0.01 -0.54 16 38 H 0.10 -1.03 8.14 -2.39 -0.02 -1.05 16 39 H 0.07 -0.36 6.82 -2.38 -0.02 -0.38 16 40 H 0.09 -0.90 7.99 -2.39 -0.02 -0.92 16 41 H 0.09 -0.78 7.99 -2.39 -0.02 -0.80 16 42 H 0.08 -0.11 7.96 -2.39 -0.02 -0.12 16 43 H 0.06 0.20 7.96 -2.38 -0.02 0.18 16 44 H 0.05 0.20 7.96 -2.38 -0.02 0.18 16 45 H 0.08 -0.40 7.96 -2.39 -0.02 -0.42 16 46 H 0.06 -0.14 7.96 -2.38 -0.02 -0.16 16 47 H 0.08 -0.38 7.96 -2.39 -0.02 -0.40 16 48 H 0.07 0.65 6.90 -2.39 -0.02 0.64 16 49 H 0.08 0.01 8.00 -2.39 -0.02 -0.01 16 50 H 0.14 0.49 4.87 -2.91 -0.01 0.47 16 51 H 0.11 -1.07 7.96 -2.38 -0.02 -1.09 16 52 H 0.40 -5.56 8.74 -74.06 -0.65 -6.21 16 53 H 0.17 -0.76 6.30 -2.91 -0.02 -0.78 16 Total: 0.00 -26.50 427.07 5.92 -20.58 By element: Atomic # 1 Polarization: -12.52 SS G_CDS: 1.05 Total: -11.47 kcal Atomic # 6 Polarization: 10.75 SS G_CDS: 6.91 Total: 17.66 kcal Atomic # 7 Polarization: -2.39 SS G_CDS: -1.64 Total: -4.04 kcal Atomic # 8 Polarization: -15.08 SS G_CDS: -2.87 Total: -17.95 kcal Atomic # 14 Polarization: -6.62 SS G_CDS: 2.54 Total: -4.08 kcal Atomic # 17 Polarization: -0.63 SS G_CDS: -0.08 Total: -0.70 kcal Total: -26.50 5.92 -20.58 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_15766672_13428712.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -117.951 kcal (2) G-P(sol) polarization free energy of solvation -26.500 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -144.450 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 5.915 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.585 kcal (6) G-S(sol) free energy of system = (1) + (5) -138.535 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.22 seconds