Wall clock time and date at job start Tue Mar 9 2021 13:31:59 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 Si 1.86299 * 1 3 3 C 1.86300 * 110.07396 * 2 1 4 4 C 1.87463 * 110.01383 * 238.60677 * 2 1 3 5 5 C 1.53649 * 107.32068 * 194.01376 * 4 2 1 6 6 C 1.52011 * 110.16127 * 60.24273 * 5 4 2 7 7 N 1.46341 * 111.97457 * 288.86987 * 6 5 4 8 8 C 1.34777 * 120.53008 * 250.94292 * 7 6 5 9 9 O 1.21278 * 119.99854 * 179.71542 * 8 7 6 10 10 C 1.50703 * 120.00161 * 359.72235 * 8 7 6 11 11 C 1.53000 * 109.46912 * 179.97438 * 10 8 7 12 12 O 1.42903 * 109.46726 * 179.97438 * 11 10 8 13 13 C 1.35904 * 116.99628 * 180.02562 * 12 11 10 14 14 C 1.38730 * 120.05544 * 359.73068 * 13 12 11 15 15 C 1.38147 * 119.94222 * 179.74118 * 14 13 12 16 16 C 1.38271 * 120.05563 * 0.50991 * 15 14 13 17 17 C 1.50697 * 119.94588 * 179.74356 * 16 15 14 18 18 O 1.42898 * 109.47360 * 245.01755 * 17 16 15 19 19 Si 1.86302 * 109.46986 * 5.02122 * 17 16 15 20 20 H 1.48495 * 109.47017 * 59.99943 * 19 17 16 21 21 H 1.48503 * 109.46953 * 179.97438 * 19 17 16 22 22 H 1.48500 * 109.47134 * 299.99843 * 19 17 16 23 23 C 1.38267 * 120.11057 * 359.76343 * 16 15 14 24 24 C 1.38151 * 120.05677 * 359.97438 * 23 16 15 25 25 C 1.47790 * 118.93467 * 70.66904 * 7 6 5 26 26 H 1.09003 * 109.47587 * 298.60711 * 1 2 3 27 27 H 1.09009 * 109.47105 * 58.60043 * 1 2 3 28 28 H 1.08996 * 109.47506 * 178.60107 * 1 2 3 29 29 H 1.09003 * 109.47360 * 181.39160 * 3 2 1 30 30 H 1.08994 * 109.47659 * 301.39789 * 3 2 1 31 31 H 1.09006 * 109.47144 * 61.39664 * 3 2 1 32 32 H 1.08994 * 109.88530 * 313.46924 * 4 2 1 33 33 H 1.09003 * 109.88491 * 74.48888 * 4 2 1 34 34 H 1.08999 * 109.35905 * 180.53723 * 5 4 2 35 35 H 1.08999 * 109.36499 * 300.27190 * 5 4 2 36 36 H 1.09001 * 108.86995 * 168.22716 * 6 5 4 37 37 H 1.09001 * 108.91840 * 49.53980 * 6 5 4 38 38 H 1.09001 * 109.46980 * 59.99654 * 10 8 7 39 39 H 1.08992 * 109.47158 * 299.99760 * 10 8 7 40 40 H 1.09002 * 109.47398 * 300.00078 * 11 10 8 41 41 H 1.09001 * 109.47194 * 60.00258 * 11 10 8 42 42 H 1.07997 * 120.03088 * 359.97438 * 14 13 12 43 43 H 1.07999 * 119.97444 * 180.22577 * 15 14 13 44 44 H 1.08998 * 109.47394 * 125.01822 * 17 16 15 45 45 H 0.96708 * 113.99788 * 59.99807 * 18 17 16 46 46 H 1.08003 * 119.97499 * 179.97438 * 23 16 15 47 47 H 1.07997 * 120.02828 * 179.97438 * 24 23 16 48 48 H 1.09001 * 110.07886 * 64.70925 * 25 7 6 49 49 H 1.08999 * 110.07976 * 186.31923 * 25 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 14 1.8630 0.0000 0.0000 3 6 2.5024 1.7498 0.0000 4 6 2.5046 -0.9175 -1.5036 5 6 3.9984 -1.1909 -1.2697 6 6 4.1867 -2.0398 -0.0228 7 7 3.9033 -1.2873 1.1999 8 6 4.9021 -0.9317 2.0320 9 8 4.6569 -0.3037 3.0401 10 6 6.3236 -1.3143 1.7097 11 6 7.2535 -0.7923 2.8068 12 8 8.6014 -1.1557 2.5015 13 6 9.5601 -0.7660 3.3824 14 6 9.2113 -0.0438 4.5144 15 6 10.1871 0.3466 5.4110 16 6 11.5116 0.0272 5.1756 17 6 12.5747 0.4593 6.1524 18 8 13.4508 1.3946 5.5202 19 14 11.7715 1.2612 7.6298 20 1 10.8612 0.2892 8.2867 21 1 12.8191 1.6865 8.5927 22 1 10.9941 2.4468 7.1878 23 6 11.8625 -0.6876 4.0452 24 6 10.8898 -1.0850 3.1482 25 6 2.5050 -0.9182 1.5045 26 1 -0.3634 0.4920 0.9022 27 1 -0.3634 0.5355 -0.8772 28 1 -0.3634 -1.0273 -0.0251 29 1 3.5921 1.7385 -0.0250 30 1 2.1243 2.2749 -0.8771 31 1 2.1650 2.2600 0.9023 32 1 1.9689 -1.8597 -1.6194 33 1 2.3739 -0.3048 -2.3955 34 1 4.4087 -1.7170 -2.1316 35 1 4.5231 -0.2443 -1.1405 36 1 5.2165 -2.3955 0.0093 37 1 3.5170 -2.8982 -0.0752 38 1 6.6096 -0.8771 0.7530 39 1 6.4034 -2.3998 1.6514 40 1 7.1737 0.2932 2.8648 41 1 6.9677 -1.2292 3.7637 42 1 8.1775 0.2098 4.6965 43 1 9.9157 0.9056 6.2943 44 1 13.1453 -0.4109 6.4769 45 1 13.0099 2.1957 5.2055 46 1 12.8978 -0.9355 3.8633 47 1 11.1644 -1.6429 2.2653 48 1 1.9103 -1.8153 1.6773 49 1 2.4712 -0.2708 2.3807 RHF calculation, no. of doubly occupied orbitals= 61 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_15766672_4549602.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:31:59 Heat of formation + Delta-G solvation = -115.671696 kcal Electronic energy + Delta-G solvation = -26699.170054 eV Core-core repulsion = 22943.072808 eV Total energy + Delta-G solvation = -3756.097246 eV No. of doubly occupied orbitals = 61 Molecular weight (most abundant/longest-lived isotopes) = 337.167 amu Computer time = 0.86 seconds Orbital eigenvalues (eV) -41.46541 -40.90632 -39.19581 -37.52859 -37.17144 -33.49751 -33.33193 -32.09984 -31.49830 -29.42445 -28.43967 -28.16276 -26.89171 -26.22468 -25.01735 -23.42012 -22.58821 -22.17150 -20.06783 -19.38369 -18.45907 -17.85637 -17.57172 -17.21438 -16.92524 -16.47571 -16.43014 -16.00721 -15.68626 -15.24506 -15.11419 -15.01071 -14.51350 -14.47757 -14.39056 -14.19105 -14.00641 -13.89308 -13.81373 -13.59383 -13.47707 -13.24506 -13.12508 -13.06131 -12.91385 -12.79767 -12.28310 -12.17336 -12.09940 -12.03741 -11.96171 -11.81964 -11.56233 -11.52360 -10.98538 -10.79951 -10.39481 -10.34443 -10.06909 -9.32661 -9.24591 0.24674 0.27633 1.17828 1.40223 1.42369 1.50044 1.57787 1.74325 1.88168 1.89098 1.99061 2.36819 2.55996 2.63088 3.45946 3.56666 3.63845 3.76243 3.81878 3.83011 3.92930 4.00490 4.15856 4.20393 4.28297 4.39327 4.50639 4.54124 4.58057 4.62760 4.63730 4.69337 4.69966 4.72890 4.75794 4.80635 4.82659 4.90680 4.94283 4.98482 5.08303 5.15294 5.25086 5.31128 5.41240 5.46986 5.47516 5.59201 5.61440 5.70073 6.26525 6.30896 6.70762 7.05832 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.457 4.457 2 Si 1.065 2.935 3 C -0.465 4.465 4 C -0.404 4.404 5 C -0.129 4.129 6 C 0.086 3.914 7 N -0.591 5.591 8 C 0.509 3.491 9 O -0.589 6.589 10 C -0.133 4.133 11 C 0.075 3.925 12 O -0.319 6.319 13 C 0.122 3.878 14 C -0.213 4.213 15 C -0.094 4.094 16 C -0.161 4.161 17 C -0.069 4.069 18 O -0.552 6.552 19 Si 0.976 3.024 20 H -0.262 1.262 21 H -0.273 1.273 22 H -0.256 1.256 23 C -0.053 4.053 24 C -0.156 4.156 25 C -0.204 4.204 26 H 0.065 0.935 27 H 0.075 0.925 28 H 0.078 0.922 29 H 0.057 0.943 30 H 0.075 0.925 31 H 0.058 0.942 32 H 0.090 0.910 33 H 0.084 0.916 34 H 0.094 0.906 35 H 0.063 0.937 36 H 0.105 0.895 37 H 0.092 0.908 38 H 0.127 0.873 39 H 0.127 0.873 40 H 0.063 0.937 41 H 0.062 0.938 42 H 0.133 0.867 43 H 0.130 0.870 44 H 0.127 0.873 45 H 0.388 0.612 46 H 0.149 0.851 47 H 0.146 0.854 48 H 0.084 0.916 49 H 0.075 0.925 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.235 -2.646 -5.834 6.785 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.565 4.565 2 Si 1.255 2.745 3 C -0.571 4.571 4 C -0.492 4.492 5 C -0.168 4.168 6 C -0.036 4.036 7 N -0.323 5.323 8 C 0.298 3.702 9 O -0.470 6.470 10 C -0.173 4.173 11 C -0.001 4.001 12 O -0.233 6.233 13 C 0.077 3.923 14 C -0.232 4.232 15 C -0.112 4.112 16 C -0.161 4.161 17 C -0.180 4.180 18 O -0.359 6.359 19 Si 0.801 3.199 20 H -0.186 1.186 21 H -0.198 1.198 22 H -0.180 1.180 23 C -0.071 4.071 24 C -0.174 4.174 25 C -0.370 4.370 26 H 0.084 0.916 27 H 0.095 0.905 28 H 0.097 0.903 29 H 0.076 0.924 30 H 0.094 0.906 31 H 0.077 0.923 32 H 0.109 0.891 33 H 0.103 0.897 34 H 0.113 0.887 35 H 0.081 0.919 36 H 0.123 0.877 37 H 0.111 0.889 38 H 0.145 0.855 39 H 0.145 0.855 40 H 0.082 0.918 41 H 0.080 0.920 42 H 0.151 0.849 43 H 0.147 0.853 44 H 0.145 0.855 45 H 0.237 0.763 46 H 0.167 0.833 47 H 0.164 0.836 48 H 0.103 0.897 49 H 0.094 0.906 Dipole moment (debyes) X Y Z Total from point charges -2.302 -2.504 -4.596 5.718 hybrid contribution -0.571 0.510 0.120 0.775 sum -2.873 -1.994 -4.476 5.680 Atomic orbital electron populations 1.26166 1.20484 1.05143 1.04672 0.78788 0.65800 0.64979 0.64907 1.26349 1.05840 1.20684 1.04181 1.26200 1.00303 1.08914 1.13744 1.21495 0.96897 1.00762 0.97611 1.21790 1.04483 0.94809 0.82514 1.47969 1.06269 1.55368 1.22705 1.20729 0.87913 0.78993 0.82584 1.90697 1.85164 1.42622 1.28519 1.21504 0.89228 1.05516 1.01028 1.22424 0.78641 1.00271 0.98768 1.85955 1.16117 1.74458 1.46737 1.19202 0.89379 0.94547 0.89197 1.21364 1.01016 1.04407 0.96372 1.21013 0.92646 0.98704 0.98803 1.20348 0.94229 1.02795 0.98749 1.24864 0.94844 0.97288 1.01026 1.86481 1.36901 1.32897 1.79586 0.85317 0.78126 0.79848 0.76582 1.18643 1.19805 1.18026 1.21040 0.99892 0.94263 0.91921 1.20732 0.89371 1.04776 1.02523 1.27207 0.85119 1.08041 1.16592 0.91580 0.90549 0.90320 0.92361 0.90557 0.92321 0.89081 0.89700 0.88748 0.91863 0.87722 0.88941 0.85517 0.85531 0.91846 0.91953 0.84890 0.85286 0.85522 0.76298 0.83330 0.83601 0.89729 0.90581 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.46 2.37 8.65 113.37 0.98 3.35 16 2 Si 1.06 -6.66 11.99 68.60 0.82 -5.84 16 3 C -0.46 0.55 8.65 113.37 0.98 1.53 16 4 C -0.40 3.38 5.03 72.20 0.36 3.75 16 5 C -0.13 1.09 5.67 30.49 0.17 1.26 16 6 C 0.09 -0.66 5.64 86.08 0.49 -0.18 16 7 N -0.59 0.58 2.64 -626.71 -1.65 -1.07 16 8 C 0.51 1.98 7.70 87.66 0.67 2.65 16 9 O -0.59 -7.58 15.41 -3.02 -0.05 -7.63 16 10 C -0.13 0.25 4.42 29.85 0.13 0.38 16 11 C 0.07 0.22 4.03 71.98 0.29 0.51 16 12 O -0.32 -1.44 10.14 -92.47 -0.94 -2.37 16 13 C 0.12 0.66 6.69 22.51 0.15 0.81 16 14 C -0.21 -1.12 9.04 22.37 0.20 -0.91 16 15 C -0.09 -0.35 8.66 22.26 0.19 -0.16 16 16 C -0.16 -0.37 5.35 -19.85 -0.11 -0.48 16 17 C -0.07 0.00 2.80 71.24 0.20 0.20 16 18 O -0.55 -0.57 12.83 -148.98 -1.91 -2.49 16 19 Si 0.98 0.55 25.14 68.60 1.72 2.27 16 20 H -0.26 -0.60 7.11 99.48 0.71 0.10 16 21 H -0.27 -0.98 7.11 99.48 0.71 -0.28 16 22 H -0.26 -0.25 7.04 99.48 0.70 0.45 16 23 C -0.05 -0.10 9.68 22.26 0.22 0.11 16 24 C -0.16 -0.49 9.99 22.37 0.22 -0.26 16 25 C -0.20 0.19 5.44 127.52 0.69 0.88 16 26 H 0.06 -0.24 7.96 -2.39 -0.02 -0.26 16 27 H 0.08 -0.41 7.96 -2.38 -0.02 -0.43 16 28 H 0.08 -0.49 7.96 -2.39 -0.02 -0.51 16 29 H 0.06 0.04 7.96 -2.39 -0.02 0.02 16 30 H 0.08 -0.19 7.96 -2.39 -0.02 -0.21 16 31 H 0.06 0.06 7.96 -2.38 -0.02 0.05 16 32 H 0.09 -0.90 7.99 -2.39 -0.02 -0.92 16 33 H 0.08 -0.72 7.99 -2.39 -0.02 -0.74 16 34 H 0.09 -0.99 8.14 -2.39 -0.02 -1.01 16 35 H 0.06 -0.44 7.89 -2.39 -0.02 -0.46 16 36 H 0.10 -1.14 5.93 -2.39 -0.01 -1.16 16 37 H 0.09 -0.91 8.10 -2.39 -0.02 -0.93 16 38 H 0.13 -0.75 8.01 -2.39 -0.02 -0.77 16 39 H 0.13 -0.74 7.60 -2.39 -0.02 -0.76 16 40 H 0.06 0.29 7.61 -2.39 -0.02 0.27 16 41 H 0.06 0.30 7.63 -2.39 -0.02 0.28 16 42 H 0.13 0.58 6.30 -2.91 -0.02 0.56 16 43 H 0.13 0.19 4.86 -2.91 -0.01 0.17 16 44 H 0.13 -0.27 7.96 -2.39 -0.02 -0.29 16 45 H 0.39 -1.90 8.70 -74.05 -0.64 -2.54 16 46 H 0.15 -0.19 8.06 -2.91 -0.02 -0.21 16 47 H 0.15 0.00 8.06 -2.91 -0.02 -0.03 16 48 H 0.08 -0.27 8.00 -2.39 -0.02 -0.29 16 49 H 0.08 0.34 6.90 -2.39 -0.02 0.33 16 Total: 0.00 -18.13 390.34 4.89 -13.24 By element: Atomic # 1 Polarization: -10.60 SS G_CDS: 1.04 Total: -9.56 kcal Atomic # 6 Polarization: 7.60 SS G_CDS: 5.85 Total: 13.45 kcal Atomic # 7 Polarization: 0.58 SS G_CDS: -1.65 Total: -1.07 kcal Atomic # 8 Polarization: -9.59 SS G_CDS: -2.90 Total: -12.49 kcal Atomic # 14 Polarization: -6.11 SS G_CDS: 2.55 Total: -3.57 kcal Total: -18.13 4.89 -13.24 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_15766672_4549602.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -102.432 kcal (2) G-P(sol) polarization free energy of solvation -18.129 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -120.561 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 4.889 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -13.240 kcal (6) G-S(sol) free energy of system = (1) + (5) -115.672 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.86 seconds