Wall clock time and date at job start Tue Mar 9 2021 13:43:50 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42889 * 1 3 3 C 1.35967 * 117.00303 * 2 1 4 4 C 1.39449 * 120.12063 * 179.97438 * 3 2 1 5 5 O 1.34774 * 133.24564 * 0.06259 * 4 3 2 6 6 C 1.34927 * 110.84485 * 179.97438 * 5 4 3 7 7 C 1.46986 * 125.14168 * 180.02562 * 6 5 4 8 8 O 1.21655 * 120.00274 * 172.60383 * 7 6 5 9 9 N 1.34774 * 119.99985 * 352.59850 * 7 6 5 10 10 C 1.46346 * 120.53435 * 172.37101 * 9 7 6 11 11 C 1.52500 * 111.69045 * 109.12933 * 10 9 7 12 12 C 1.53652 * 110.12617 * 71.26838 * 11 10 9 13 13 Si 1.87460 * 107.32200 * 299.66210 * 12 11 10 14 14 C 1.86296 * 110.01413 * 287.41342 * 13 12 11 15 15 C 1.86298 * 110.09840 * 166.02558 * 13 12 11 16 16 C 1.47791 * 120.53177 * 352.39752 * 9 7 6 17 17 C 1.35809 * 109.71707 * 0.26408 * 6 5 4 18 18 C 1.40612 * 119.13404 * 180.02562 * 4 3 2 19 19 C 1.39772 * 120.12026 * 0.03110 * 18 4 3 20 20 C 1.50703 * 120.09657 * 179.97438 * 19 18 4 21 21 O 1.42904 * 109.46940 * 74.99429 * 20 19 18 22 22 Si 1.86293 * 109.47603 * 194.99723 * 20 19 18 23 23 H 1.48498 * 109.46957 * 59.99986 * 22 20 19 24 24 H 1.48495 * 109.47394 * 179.97438 * 22 20 19 25 25 H 1.48497 * 109.47363 * 300.00196 * 22 20 19 26 26 C 1.36628 * 119.81355 * 359.97007 * 19 18 4 27 27 C 1.38261 * 120.11752 * 0.02562 * 3 2 1 28 28 H 1.09005 * 109.47192 * 60.00319 * 1 2 3 29 29 H 1.09001 * 109.47567 * 180.02562 * 1 2 3 30 30 H 1.08998 * 109.47681 * 300.00635 * 1 2 3 31 31 H 1.08996 * 109.03554 * 229.70475 * 10 9 7 32 32 H 1.09000 * 109.03238 * 348.56301 * 10 9 7 33 33 H 1.08998 * 109.36568 * 191.46809 * 11 10 9 34 34 H 1.09001 * 109.36395 * 311.06569 * 11 10 9 35 35 H 1.08994 * 109.88831 * 180.20708 * 12 11 10 36 36 H 1.08999 * 109.88134 * 59.11168 * 12 11 10 37 37 H 1.09001 * 109.47270 * 177.20855 * 14 13 12 38 38 H 1.08996 * 109.47369 * 57.20873 * 14 13 12 39 39 H 1.09008 * 109.47166 * 297.20819 * 14 13 12 40 40 H 1.08997 * 109.47340 * 181.39556 * 15 13 12 41 41 H 1.09007 * 109.46647 * 301.39977 * 15 13 12 42 42 H 1.09002 * 109.46710 * 61.39533 * 15 13 12 43 43 H 1.08997 * 110.08608 * 115.51994 * 16 9 7 44 44 H 1.08997 * 110.17285 * 353.95740 * 16 9 7 45 45 H 1.08001 * 126.95767 * 179.69222 * 17 6 5 46 46 H 1.09000 * 109.47008 * 315.00469 * 20 19 18 47 47 H 0.96707 * 113.99875 * 60.00779 * 21 20 19 48 48 H 1.08007 * 119.75447 * 179.97438 * 26 19 18 49 49 H 1.07998 * 119.66462 * 359.97438 * 27 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4289 0.0000 0.0000 3 6 2.0462 1.2114 0.0000 4 6 3.4387 1.2873 0.0005 5 8 4.4141 0.3572 0.0000 6 6 5.6317 0.9385 0.0004 7 6 6.9130 0.2183 -0.0005 8 8 7.9552 0.8311 -0.1357 9 7 6.9333 -1.1210 0.1486 10 6 8.1807 -1.8686 -0.0158 11 6 8.6971 -2.4032 1.3158 12 6 7.7998 -3.5487 1.8093 13 14 6.0733 -2.8514 2.0264 14 6 6.0161 -1.7451 3.5242 15 6 4.8417 -4.2370 2.2105 16 6 5.6962 -1.8584 0.4801 17 6 5.4944 2.2896 0.0071 18 6 4.0554 2.5509 0.0011 19 6 3.2766 3.7115 0.0017 20 6 3.9382 5.0656 0.0029 21 8 4.4610 5.3413 -1.2982 22 14 2.6864 6.3681 0.4580 23 1 2.1432 6.0815 1.8100 24 1 3.3385 7.7022 0.4597 25 1 1.5799 6.3587 -0.5322 26 6 1.9137 3.6150 0.0012 27 6 1.2957 2.3726 0.0005 28 1 -0.3634 0.5138 -0.8900 29 1 -0.3634 -1.0276 0.0005 30 1 -0.3634 0.5139 0.8899 31 1 8.0069 -2.7058 -0.6918 32 1 8.9338 -1.2120 -0.4515 33 1 9.7149 -2.7713 1.1872 34 1 8.6958 -1.6000 2.0526 35 1 8.1701 -3.9253 2.7628 36 1 7.7853 -4.3520 1.0727 37 1 5.0226 -1.3057 3.6138 38 1 6.7560 -0.9517 3.4184 39 1 6.2363 -2.3305 4.4170 40 1 3.8392 -3.8212 2.3112 41 1 4.8823 -4.8786 1.3302 42 1 5.0831 -4.8221 3.0979 43 1 5.4284 -2.5272 -0.3379 44 1 4.8824 -1.1596 0.6733 45 1 6.2874 3.0228 0.0136 46 1 4.7504 5.0724 0.7297 47 1 3.7924 5.3511 -1.9968 48 1 1.3128 4.5125 0.0021 49 1 0.2174 2.3120 0.0005 RHF calculation, no. of doubly occupied orbitals= 65 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_22_15766672_6672420.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:43:50 Heat of formation + Delta-G solvation = -94.561343 kcal Electronic energy + Delta-G solvation = -31778.622820 eV Core-core repulsion = 27603.844134 eV Total energy + Delta-G solvation = -4174.778686 eV No. of doubly occupied orbitals = 65 Molecular weight (most abundant/longest-lived isotopes) = 363.151 amu Computer time = 2.00 seconds Orbital eigenvalues (eV) -43.66433 -40.99483 -40.34124 -39.07745 -37.32017 -36.98724 -33.89168 -33.51214 -31.88263 -30.90674 -29.53321 -28.76617 -28.52928 -27.88547 -26.89233 -26.22938 -24.54549 -23.91450 -22.44641 -21.74445 -20.78551 -19.21255 -19.10486 -18.40740 -17.76482 -17.69037 -17.29575 -16.94292 -16.71481 -16.27009 -16.02300 -15.86868 -15.80615 -15.11209 -14.89546 -14.81633 -14.56051 -14.47370 -14.31192 -14.14432 -14.01422 -13.95797 -13.73841 -13.45419 -13.38664 -13.34952 -13.32090 -13.17399 -12.97263 -12.61210 -12.36698 -12.18784 -12.17095 -12.10209 -12.05090 -11.66506 -11.64467 -11.13656 -10.93824 -10.87855 -10.49667 -10.42369 -9.76824 -9.34119 -8.94314 -0.52941 0.14839 0.76796 1.09489 1.29089 1.36577 1.48172 1.48810 1.63886 1.73543 1.87607 2.01038 2.09463 2.18032 2.43163 2.45134 3.16512 3.40973 3.54892 3.65212 3.85979 3.87082 3.90995 4.00999 4.07812 4.09141 4.09517 4.21300 4.34103 4.43033 4.45196 4.50764 4.53329 4.62334 4.64720 4.65997 4.68519 4.70519 4.77034 4.80187 4.90673 4.91796 5.02198 5.13122 5.17050 5.27298 5.32091 5.35771 5.41099 5.49855 5.52992 5.70121 6.15553 6.26780 6.54627 7.00420 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.024 3.976 2 O -0.311 6.311 3 C 0.150 3.850 4 C 0.035 3.965 5 O -0.163 6.163 6 C -0.018 4.018 7 C 0.595 3.405 8 O -0.514 6.514 9 N -0.584 5.584 10 C 0.103 3.897 11 C -0.125 4.125 12 C -0.404 4.404 13 Si 0.995 3.005 14 C -0.445 4.445 15 C -0.444 4.444 16 C -0.201 4.201 17 C -0.106 4.106 18 C -0.078 4.078 19 C -0.098 4.098 20 C -0.079 4.079 21 O -0.534 6.534 22 Si 0.951 3.049 23 H -0.248 1.248 24 H -0.251 1.251 25 H -0.251 1.251 26 C -0.102 4.102 27 C -0.179 4.179 28 H 0.060 0.940 29 H 0.105 0.895 30 H 0.060 0.940 31 H 0.079 0.921 32 H 0.095 0.905 33 H 0.079 0.921 34 H 0.069 0.931 35 H 0.079 0.921 36 H 0.079 0.921 37 H 0.070 0.930 38 H 0.069 0.931 39 H 0.072 0.928 40 H 0.072 0.928 41 H 0.072 0.928 42 H 0.073 0.927 43 H 0.082 0.918 44 H 0.117 0.883 45 H 0.175 0.825 46 H 0.118 0.882 47 H 0.376 0.624 48 H 0.135 0.865 49 H 0.146 0.854 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.467 -2.403 1.323 6.116 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.071 4.071 2 O -0.224 6.224 3 C 0.104 3.896 4 C -0.013 4.013 5 O -0.066 6.066 6 C -0.068 4.068 7 C 0.382 3.618 8 O -0.391 6.391 9 N -0.316 5.316 10 C -0.019 4.019 11 C -0.163 4.163 12 C -0.491 4.491 13 Si 1.190 2.810 14 C -0.553 4.553 15 C -0.553 4.553 16 C -0.368 4.368 17 C -0.127 4.127 18 C -0.079 4.079 19 C -0.099 4.099 20 C -0.190 4.190 21 O -0.339 6.339 22 Si 0.773 3.227 23 H -0.171 1.171 24 H -0.174 1.174 25 H -0.175 1.175 26 C -0.120 4.120 27 C -0.198 4.198 28 H 0.078 0.922 29 H 0.124 0.876 30 H 0.079 0.921 31 H 0.097 0.903 32 H 0.114 0.886 33 H 0.098 0.902 34 H 0.088 0.912 35 H 0.098 0.902 36 H 0.098 0.902 37 H 0.089 0.911 38 H 0.088 0.912 39 H 0.091 0.909 40 H 0.091 0.909 41 H 0.091 0.909 42 H 0.092 0.908 43 H 0.101 0.899 44 H 0.134 0.866 45 H 0.192 0.808 46 H 0.136 0.864 47 H 0.223 0.777 48 H 0.152 0.848 49 H 0.164 0.836 Dipole moment (debyes) X Y Z Total from point charges -4.904 -1.910 1.776 5.555 hybrid contribution -0.623 -0.268 -0.506 0.846 sum -5.528 -2.178 1.270 6.076 Atomic orbital electron populations 1.23183 0.77403 1.04727 1.01762 1.86163 1.22078 1.25712 1.88425 1.17727 0.86591 0.85784 0.99464 1.18994 0.87780 0.87580 1.06945 1.84326 1.12761 1.33447 1.76051 1.22018 0.83934 0.92493 1.08370 1.16870 0.85476 0.81845 0.77582 1.90900 1.30779 1.66888 1.50535 1.47720 1.09915 1.05375 1.68571 1.21489 0.85696 0.96579 0.98089 1.21507 0.99932 0.98036 0.96815 1.26237 1.15904 1.02439 1.04513 0.79825 0.67935 0.66974 0.66217 1.26059 1.04627 1.10092 1.14540 1.26018 1.11362 1.12937 1.04949 1.27448 0.88993 1.05327 1.15060 1.22744 0.94712 0.94292 1.00945 1.19381 0.92647 0.91947 1.03907 1.19435 0.92744 0.94598 1.03140 1.24993 1.06789 0.97600 0.89591 1.86560 1.37953 1.93351 1.15997 0.85689 0.77287 0.78473 0.81250 1.17110 1.17445 1.17459 1.20540 0.93546 0.97777 1.00134 1.20943 1.00302 0.90604 1.07924 0.92156 0.87629 0.92131 0.90317 0.88621 0.90244 0.91247 0.90198 0.90229 0.91127 0.91222 0.90860 0.90899 0.90915 0.90813 0.89942 0.86586 0.80785 0.86399 0.77724 0.84756 0.83619 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.07 9.81 101.05 0.99 0.93 16 2 O -0.31 -0.40 10.50 -19.64 -0.21 -0.60 16 3 C 0.15 0.27 6.70 -39.12 -0.26 0.01 16 4 C 0.03 0.12 7.35 -38.24 -0.28 -0.16 16 5 O -0.16 -0.58 7.08 2.66 0.02 -0.56 16 6 C -0.02 -0.07 6.74 -36.91 -0.25 -0.32 16 7 C 0.60 2.56 7.65 -12.72 -0.10 2.47 16 8 O -0.51 -3.51 16.29 5.23 0.09 -3.43 16 9 N -0.58 -1.03 2.63 -113.08 -0.30 -1.33 16 10 C 0.10 0.04 5.75 -4.38 -0.03 0.01 16 11 C -0.12 0.08 5.68 -26.65 -0.15 -0.07 16 12 C -0.40 0.74 5.03 37.50 0.19 0.93 16 13 Si 1.00 -2.13 11.99 -169.99 -2.04 -4.16 16 14 C -0.45 0.26 8.65 101.05 0.87 1.14 16 15 C -0.44 0.88 8.65 101.05 0.87 1.75 16 16 C -0.20 0.01 5.09 60.55 0.31 0.32 16 17 C -0.11 -0.37 10.68 -37.23 -0.40 -0.76 16 18 C -0.08 -0.23 6.16 -105.21 -0.65 -0.87 16 19 C -0.10 -0.11 5.26 -104.63 -0.55 -0.66 16 20 C -0.08 0.00 2.70 36.01 0.10 0.10 16 21 O -0.53 -0.42 12.88 -35.23 -0.45 -0.88 16 22 Si 0.95 -0.90 25.50 -169.99 -4.33 -5.23 16 23 H -0.25 0.09 7.11 56.52 0.40 0.50 16 24 H -0.25 -0.15 7.11 56.52 0.40 0.25 16 25 H -0.25 0.36 6.74 56.52 0.38 0.74 16 26 C -0.10 0.01 8.62 -39.97 -0.34 -0.33 16 27 C -0.18 0.04 9.03 -39.38 -0.36 -0.32 16 28 H 0.06 -0.22 7.66 -51.93 -0.40 -0.62 16 29 H 0.11 -0.44 8.14 -51.93 -0.42 -0.86 16 30 H 0.06 -0.23 7.66 -51.93 -0.40 -0.63 16 31 H 0.08 -0.09 8.11 -51.93 -0.42 -0.52 16 32 H 0.10 0.15 7.07 -51.93 -0.37 -0.22 16 33 H 0.08 -0.10 8.14 -51.93 -0.42 -0.52 16 34 H 0.07 0.02 7.90 -51.93 -0.41 -0.39 16 35 H 0.08 -0.16 7.99 -51.93 -0.41 -0.57 16 36 H 0.08 -0.19 7.99 -51.93 -0.41 -0.60 16 37 H 0.07 -0.02 7.96 -51.93 -0.41 -0.44 16 38 H 0.07 0.03 7.96 -51.93 -0.41 -0.38 16 39 H 0.07 -0.08 7.96 -51.92 -0.41 -0.49 16 40 H 0.07 -0.13 7.96 -51.93 -0.41 -0.54 16 41 H 0.07 -0.16 7.96 -51.92 -0.41 -0.57 16 42 H 0.07 -0.15 7.96 -51.93 -0.41 -0.56 16 43 H 0.08 -0.08 8.00 -51.93 -0.42 -0.49 16 44 H 0.12 0.11 4.11 -53.35 -0.22 -0.11 16 45 H 0.17 0.47 8.06 -52.49 -0.42 0.05 16 46 H 0.12 -0.06 7.96 -51.93 -0.41 -0.47 16 47 H 0.38 -0.96 8.70 45.56 0.40 -0.56 16 48 H 0.13 -0.28 4.84 -52.48 -0.25 -0.53 16 49 H 0.15 -0.43 6.26 -52.49 -0.33 -0.76 16 LS Contribution 393.73 15.07 5.93 5.93 Total: 0.00 -7.49 393.73 -7.94 -15.44 By element: Atomic # 1 Polarization: -2.69 SS G_CDS: -6.62 Total: -9.31 kcal Atomic # 6 Polarization: 4.17 SS G_CDS: -0.03 Total: 4.14 kcal Atomic # 7 Polarization: -1.03 SS G_CDS: -0.30 Total: -1.33 kcal Atomic # 8 Polarization: -4.92 SS G_CDS: -0.56 Total: -5.47 kcal Atomic # 14 Polarization: -3.02 SS G_CDS: -6.37 Total: -9.39 kcal Total LS contribution 5.93 Total: 5.93 kcal Total: -7.49 -7.94 -15.44 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_15766672_6672420.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -79.125 kcal (2) G-P(sol) polarization free energy of solvation -7.493 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -86.618 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.944 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.437 kcal (6) G-S(sol) free energy of system = (1) + (5) -94.561 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 2.00 seconds