Wall clock time and date at job start Tue Mar 9 2021 13:43:48 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42889 * 1 3 3 C 1.35967 * 117.00303 * 2 1 4 4 C 1.39449 * 120.12063 * 179.97438 * 3 2 1 5 5 O 1.34774 * 133.24564 * 0.06259 * 4 3 2 6 6 C 1.34927 * 110.84485 * 179.97438 * 5 4 3 7 7 C 1.46986 * 125.14168 * 180.02562 * 6 5 4 8 8 O 1.21655 * 120.00274 * 172.60383 * 7 6 5 9 9 N 1.34774 * 119.99985 * 352.59850 * 7 6 5 10 10 C 1.46346 * 120.53435 * 172.37101 * 9 7 6 11 11 C 1.52500 * 111.69045 * 109.12933 * 10 9 7 12 12 C 1.53652 * 110.12617 * 71.26838 * 11 10 9 13 13 Si 1.87460 * 107.32200 * 299.66210 * 12 11 10 14 14 C 1.86296 * 110.01413 * 287.41342 * 13 12 11 15 15 C 1.86298 * 110.09840 * 166.02558 * 13 12 11 16 16 C 1.47791 * 120.53177 * 352.39752 * 9 7 6 17 17 C 1.35809 * 109.71707 * 0.26408 * 6 5 4 18 18 C 1.40612 * 119.13404 * 180.02562 * 4 3 2 19 19 C 1.39772 * 120.12026 * 0.03110 * 18 4 3 20 20 C 1.50703 * 120.09657 * 179.97438 * 19 18 4 21 21 O 1.42904 * 109.46940 * 74.99429 * 20 19 18 22 22 Si 1.86293 * 109.47603 * 194.99723 * 20 19 18 23 23 H 1.48498 * 109.46957 * 59.99986 * 22 20 19 24 24 H 1.48495 * 109.47394 * 179.97438 * 22 20 19 25 25 H 1.48497 * 109.47363 * 300.00196 * 22 20 19 26 26 C 1.36628 * 119.81355 * 359.97007 * 19 18 4 27 27 C 1.38261 * 120.11752 * 0.02562 * 3 2 1 28 28 H 1.09005 * 109.47192 * 60.00319 * 1 2 3 29 29 H 1.09001 * 109.47567 * 180.02562 * 1 2 3 30 30 H 1.08998 * 109.47681 * 300.00635 * 1 2 3 31 31 H 1.08996 * 109.03554 * 229.70475 * 10 9 7 32 32 H 1.09000 * 109.03238 * 348.56301 * 10 9 7 33 33 H 1.08998 * 109.36568 * 191.46809 * 11 10 9 34 34 H 1.09001 * 109.36395 * 311.06569 * 11 10 9 35 35 H 1.08994 * 109.88831 * 180.20708 * 12 11 10 36 36 H 1.08999 * 109.88134 * 59.11168 * 12 11 10 37 37 H 1.09001 * 109.47270 * 177.20855 * 14 13 12 38 38 H 1.08996 * 109.47369 * 57.20873 * 14 13 12 39 39 H 1.09008 * 109.47166 * 297.20819 * 14 13 12 40 40 H 1.08997 * 109.47340 * 181.39556 * 15 13 12 41 41 H 1.09007 * 109.46647 * 301.39977 * 15 13 12 42 42 H 1.09002 * 109.46710 * 61.39533 * 15 13 12 43 43 H 1.08997 * 110.08608 * 115.51994 * 16 9 7 44 44 H 1.08997 * 110.17285 * 353.95740 * 16 9 7 45 45 H 1.08001 * 126.95767 * 179.69222 * 17 6 5 46 46 H 1.09000 * 109.47008 * 315.00469 * 20 19 18 47 47 H 0.96707 * 113.99875 * 60.00779 * 21 20 19 48 48 H 1.08007 * 119.75447 * 179.97438 * 26 19 18 49 49 H 1.07998 * 119.66462 * 359.97438 * 27 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4289 0.0000 0.0000 3 6 2.0462 1.2114 0.0000 4 6 3.4387 1.2873 0.0005 5 8 4.4141 0.3572 0.0000 6 6 5.6317 0.9385 0.0004 7 6 6.9130 0.2183 -0.0005 8 8 7.9552 0.8311 -0.1357 9 7 6.9333 -1.1210 0.1486 10 6 8.1807 -1.8686 -0.0158 11 6 8.6971 -2.4032 1.3158 12 6 7.7998 -3.5487 1.8093 13 14 6.0733 -2.8514 2.0264 14 6 6.0161 -1.7451 3.5242 15 6 4.8417 -4.2370 2.2105 16 6 5.6962 -1.8584 0.4801 17 6 5.4944 2.2896 0.0071 18 6 4.0554 2.5509 0.0011 19 6 3.2766 3.7115 0.0017 20 6 3.9382 5.0656 0.0029 21 8 4.4610 5.3413 -1.2982 22 14 2.6864 6.3681 0.4580 23 1 2.1432 6.0815 1.8100 24 1 3.3385 7.7022 0.4597 25 1 1.5799 6.3587 -0.5322 26 6 1.9137 3.6150 0.0012 27 6 1.2957 2.3726 0.0005 28 1 -0.3634 0.5138 -0.8900 29 1 -0.3634 -1.0276 0.0005 30 1 -0.3634 0.5139 0.8899 31 1 8.0069 -2.7058 -0.6918 32 1 8.9338 -1.2120 -0.4515 33 1 9.7149 -2.7713 1.1872 34 1 8.6958 -1.6000 2.0526 35 1 8.1701 -3.9253 2.7628 36 1 7.7853 -4.3520 1.0727 37 1 5.0226 -1.3057 3.6138 38 1 6.7560 -0.9517 3.4184 39 1 6.2363 -2.3305 4.4170 40 1 3.8392 -3.8212 2.3112 41 1 4.8823 -4.8786 1.3302 42 1 5.0831 -4.8221 3.0979 43 1 5.4284 -2.5272 -0.3379 44 1 4.8824 -1.1596 0.6733 45 1 6.2874 3.0228 0.0136 46 1 4.7504 5.0724 0.7297 47 1 3.7924 5.3511 -1.9968 48 1 1.3128 4.5125 0.0021 49 1 0.2174 2.3120 0.0005 RHF calculation, no. of doubly occupied orbitals= 65 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_15766672_6672420.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:43:48 Heat of formation + Delta-G solvation = -89.343131 kcal Electronic energy + Delta-G solvation = -31778.396542 eV Core-core repulsion = 27603.844134 eV Total energy + Delta-G solvation = -4174.552407 eV No. of doubly occupied orbitals = 65 Molecular weight (most abundant/longest-lived isotopes) = 363.151 amu Computer time = 0.98 seconds Orbital eigenvalues (eV) -43.82988 -41.14353 -40.45279 -39.10208 -37.50337 -37.01626 -33.93258 -33.67787 -31.93369 -31.00135 -29.44958 -28.64386 -28.43696 -27.86726 -26.97468 -26.23015 -24.62868 -24.01140 -22.46581 -21.86315 -20.92197 -19.28881 -19.21263 -18.44862 -17.87814 -17.83124 -17.46458 -16.97033 -16.72469 -16.26848 -16.10708 -15.91481 -15.82105 -15.09274 -14.90961 -14.85534 -14.59954 -14.56957 -14.43163 -14.15323 -13.97416 -13.90206 -13.73107 -13.45719 -13.32570 -13.30196 -13.22940 -13.12961 -12.97487 -12.46837 -12.30591 -12.14024 -12.12847 -12.09367 -12.05350 -11.80726 -11.62266 -11.30639 -11.02304 -10.85087 -10.43211 -10.38159 -9.91992 -9.44068 -9.01609 -0.69202 0.06552 0.58451 1.11200 1.17224 1.45176 1.51284 1.55692 1.67775 1.82082 1.92390 1.93422 2.06939 2.12466 2.37038 2.51642 3.02723 3.37458 3.59266 3.66163 3.74708 3.85419 3.87620 4.02587 4.06885 4.09775 4.29564 4.32485 4.40219 4.42040 4.44456 4.52054 4.64673 4.68287 4.70229 4.75161 4.77285 4.81479 4.83302 4.84923 4.85921 4.91020 4.99455 5.05254 5.18072 5.22243 5.32848 5.42072 5.43822 5.53189 5.58342 5.62682 6.00232 6.23443 6.70178 6.74160 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.013 3.987 2 O -0.330 6.330 3 C 0.139 3.861 4 C 0.011 3.989 5 O -0.166 6.166 6 C -0.032 4.032 7 C 0.587 3.413 8 O -0.552 6.552 9 N -0.577 5.577 10 C 0.097 3.903 11 C -0.124 4.124 12 C -0.406 4.406 13 Si 1.059 2.941 14 C -0.464 4.464 15 C -0.447 4.447 16 C -0.222 4.222 17 C -0.115 4.115 18 C -0.093 4.093 19 C -0.105 4.105 20 C -0.089 4.089 21 O -0.552 6.552 22 Si 0.992 3.008 23 H -0.252 1.252 24 H -0.276 1.276 25 H -0.232 1.232 26 C -0.098 4.098 27 C -0.168 4.168 28 H 0.073 0.927 29 H 0.118 0.882 30 H 0.074 0.926 31 H 0.100 0.900 32 H 0.079 0.921 33 H 0.088 0.912 34 H 0.055 0.945 35 H 0.087 0.913 36 H 0.094 0.906 37 H 0.064 0.936 38 H 0.053 0.947 39 H 0.079 0.921 40 H 0.070 0.930 41 H 0.080 0.920 42 H 0.079 0.921 43 H 0.094 0.906 44 H 0.105 0.895 45 H 0.172 0.828 46 H 0.112 0.888 47 H 0.389 0.611 48 H 0.160 0.840 49 H 0.179 0.821 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.669 -3.387 1.412 8.501 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.080 4.080 2 O -0.244 6.244 3 C 0.092 3.908 4 C -0.037 4.037 5 O -0.069 6.069 6 C -0.082 4.082 7 C 0.374 3.626 8 O -0.433 6.433 9 N -0.307 5.307 10 C -0.024 4.024 11 C -0.162 4.162 12 C -0.493 4.493 13 Si 1.250 2.750 14 C -0.570 4.570 15 C -0.556 4.556 16 C -0.386 4.386 17 C -0.135 4.135 18 C -0.094 4.094 19 C -0.106 4.106 20 C -0.197 4.197 21 O -0.359 6.359 22 Si 0.814 3.186 23 H -0.176 1.176 24 H -0.201 1.201 25 H -0.155 1.155 26 C -0.116 4.116 27 C -0.187 4.187 28 H 0.091 0.909 29 H 0.136 0.864 30 H 0.093 0.907 31 H 0.118 0.882 32 H 0.097 0.903 33 H 0.106 0.894 34 H 0.074 0.926 35 H 0.106 0.894 36 H 0.112 0.888 37 H 0.083 0.917 38 H 0.072 0.928 39 H 0.098 0.902 40 H 0.089 0.911 41 H 0.099 0.901 42 H 0.098 0.902 43 H 0.113 0.887 44 H 0.123 0.877 45 H 0.189 0.811 46 H 0.130 0.870 47 H 0.238 0.762 48 H 0.177 0.823 49 H 0.196 0.804 Dipole moment (debyes) X Y Z Total from point charges -7.137 -2.917 1.850 7.929 hybrid contribution -0.007 0.048 -0.535 0.537 sum -7.145 -2.869 1.315 7.811 Atomic orbital electron populations 1.23490 0.75387 1.06108 1.03055 1.86139 1.24224 1.25645 1.88433 1.17934 0.86126 0.86798 0.99897 1.19442 0.88640 0.87724 1.07880 1.84332 1.12642 1.33603 1.76351 1.21994 0.84161 0.92716 1.09300 1.17052 0.85205 0.82686 0.77627 1.90858 1.31870 1.67815 1.52793 1.47869 1.11106 1.04721 1.67011 1.21665 0.84815 0.96650 0.99273 1.21495 1.00795 0.98175 0.95732 1.26279 1.15432 1.02265 1.05305 0.78913 0.67633 0.65410 0.63061 1.26316 1.03777 1.10369 1.16501 1.26035 1.11063 1.12892 1.05606 1.27908 0.88035 1.05274 1.17344 1.22850 0.95445 0.94308 1.00933 1.19546 0.92248 0.92800 1.04846 1.19653 0.93408 0.94376 1.03131 1.25232 1.07407 0.97837 0.89259 1.86525 1.39283 1.93350 1.16790 0.85117 0.76537 0.75866 0.81130 1.17591 1.20140 1.15519 1.20863 0.93075 0.98858 0.98801 1.21355 1.01771 0.89703 1.05827 0.90860 0.86401 0.90702 0.88153 0.90289 0.89356 0.92587 0.89378 0.88780 0.91691 0.92803 0.90169 0.91051 0.90129 0.90225 0.88736 0.87738 0.81085 0.86956 0.76189 0.82280 0.80412 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.09 9.81 113.37 1.11 1.02 16 2 O -0.33 -0.85 10.50 -93.18 -0.98 -1.83 16 3 C 0.14 0.54 6.70 22.57 0.15 0.69 16 4 C 0.01 0.09 7.35 23.14 0.17 0.26 16 5 O -0.17 -1.63 7.08 -13.39 -0.09 -1.73 16 6 C -0.03 -0.36 6.74 24.00 0.16 -0.19 16 7 C 0.59 7.01 7.65 86.54 0.66 7.67 16 8 O -0.55 -9.72 16.29 -4.21 -0.07 -9.79 16 9 N -0.58 -3.22 2.63 -629.91 -1.65 -4.87 16 10 C 0.10 0.20 5.75 86.24 0.50 0.69 16 11 C -0.12 0.09 5.68 30.65 0.17 0.26 16 12 C -0.41 1.83 5.03 72.20 0.36 2.19 16 13 Si 1.06 -4.51 11.99 68.60 0.82 -3.68 16 14 C -0.46 -0.05 8.65 113.37 0.98 0.93 16 15 C -0.45 2.29 8.65 113.37 0.98 3.27 16 16 C -0.22 -0.24 5.09 127.52 0.65 0.41 16 17 C -0.11 -1.18 10.68 23.79 0.25 -0.93 16 18 C -0.09 -0.74 6.16 -20.24 -0.12 -0.86 16 19 C -0.10 -0.30 5.26 -19.87 -0.10 -0.40 16 20 C -0.09 -0.08 2.70 71.24 0.19 0.12 16 21 O -0.55 -1.47 12.88 -148.98 -1.92 -3.39 16 22 Si 0.99 -2.54 25.50 68.60 1.75 -0.79 16 23 H -0.25 0.46 7.11 99.48 0.71 1.17 16 24 H -0.28 -0.46 7.11 99.48 0.71 0.25 16 25 H -0.23 1.28 6.74 99.48 0.67 1.95 16 26 C -0.10 0.14 8.62 22.02 0.19 0.33 16 27 C -0.17 0.29 9.03 22.40 0.20 0.49 16 28 H 0.07 -0.69 7.66 -2.38 -0.02 -0.71 16 29 H 0.12 -1.12 8.14 -2.39 -0.02 -1.14 16 30 H 0.07 -0.72 7.66 -2.39 -0.02 -0.74 16 31 H 0.10 -0.25 8.11 -2.39 -0.02 -0.27 16 32 H 0.08 0.44 7.07 -2.39 -0.02 0.42 16 33 H 0.09 -0.21 8.14 -2.39 -0.02 -0.23 16 34 H 0.06 0.12 7.90 -2.39 -0.02 0.10 16 35 H 0.09 -0.47 7.99 -2.39 -0.02 -0.49 16 36 H 0.09 -0.64 7.99 -2.39 -0.02 -0.65 16 37 H 0.06 0.06 7.96 -2.39 -0.02 0.05 16 38 H 0.05 0.18 7.96 -2.39 -0.02 0.16 16 39 H 0.08 -0.13 7.96 -2.38 -0.02 -0.15 16 40 H 0.07 -0.31 7.96 -2.39 -0.02 -0.33 16 41 H 0.08 -0.50 7.96 -2.38 -0.02 -0.52 16 42 H 0.08 -0.45 7.96 -2.39 -0.02 -0.47 16 43 H 0.09 -0.15 8.00 -2.39 -0.02 -0.17 16 44 H 0.11 0.42 4.11 -24.79 -0.10 0.32 16 45 H 0.17 1.64 8.06 -2.91 -0.02 1.61 16 46 H 0.11 0.13 7.96 -2.39 -0.02 0.11 16 47 H 0.39 -1.82 8.70 -74.05 -0.64 -2.46 16 48 H 0.16 -1.07 4.84 -2.91 -0.01 -1.09 16 49 H 0.18 -1.57 6.26 -2.91 -0.02 -1.59 16 Total: 0.00 -20.29 393.73 5.33 -14.96 By element: Atomic # 1 Polarization: -5.82 SS G_CDS: 0.96 Total: -4.85 kcal Atomic # 6 Polarization: 9.45 SS G_CDS: 6.51 Total: 15.96 kcal Atomic # 7 Polarization: -3.22 SS G_CDS: -1.65 Total: -4.87 kcal Atomic # 8 Polarization: -13.66 SS G_CDS: -3.06 Total: -16.73 kcal Atomic # 14 Polarization: -7.05 SS G_CDS: 2.57 Total: -4.48 kcal Total: -20.29 5.33 -14.96 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_15766672_6672420.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -74.381 kcal (2) G-P(sol) polarization free energy of solvation -20.289 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -94.670 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 5.327 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -14.962 kcal (6) G-S(sol) free energy of system = (1) + (5) -89.343 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.98 seconds