Wall clock time and date at job start Tue Mar 9 2021 13:44:01 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50700 * 1 3 3 C 1.33816 * 122.45244 * 2 1 4 4 C 1.50700 * 124.52109 * 359.97438 * 3 2 1 5 5 O 1.42893 * 109.47362 * 124.06656 * 4 3 2 6 6 Si 1.86304 * 109.46965 * 244.06737 * 4 3 2 7 7 H 1.48500 * 109.46851 * 59.99978 * 6 4 3 8 8 H 1.48498 * 109.47091 * 179.97438 * 6 4 3 9 9 H 1.48495 * 109.46738 * 300.00166 * 6 4 3 10 10 S 1.70614 * 110.95553 * 180.02562 * 3 2 1 11 11 C 1.75840 * 91.56311 * 359.97438 * 10 3 2 12 12 C 1.46577 * 125.45611 * 180.02562 * 11 10 3 13 13 O 1.21705 * 119.99869 * 170.99876 * 12 11 10 14 14 N 1.34780 * 120.00253 * 350.99682 * 12 11 10 15 15 C 1.46340 * 120.53088 * 345.95004 * 14 12 11 16 16 C 1.52505 * 111.69117 * 109.10885 * 15 14 12 17 17 C 1.53649 * 110.12292 * 71.26139 * 16 15 14 18 18 Si 1.87453 * 107.32593 * 299.66274 * 17 16 15 19 19 C 1.86307 * 110.01130 * 165.98056 * 18 17 16 20 20 C 1.86291 * 110.01677 * 287.41289 * 18 17 16 21 21 C 1.47796 * 120.53164 * 165.67097 * 14 12 11 22 22 C 1.36640 * 109.08321 * 0.26306 * 11 10 3 23 23 H 1.08997 * 109.47158 * 83.09104 * 1 2 3 24 24 H 1.09000 * 109.47444 * 203.09359 * 1 2 3 25 25 H 1.08999 * 109.47055 * 323.09510 * 1 2 3 26 26 H 1.08999 * 109.46878 * 4.06501 * 4 3 2 27 27 H 0.96707 * 113.99950 * 59.99906 * 5 4 3 28 28 H 1.08997 * 109.03445 * 229.67796 * 15 14 12 29 29 H 1.08998 * 109.03605 * 348.61392 * 15 14 12 30 30 H 1.08995 * 109.36078 * 191.46456 * 16 15 14 31 31 H 1.08998 * 109.35948 * 311.06511 * 16 15 14 32 32 H 1.09010 * 109.88204 * 59.12399 * 17 16 15 33 33 H 1.09001 * 109.88730 * 180.12754 * 17 16 15 34 34 H 1.09002 * 109.47199 * 60.00596 * 19 18 17 35 35 H 1.09007 * 109.47104 * 180.02562 * 19 18 17 36 36 H 1.09001 * 109.47510 * 299.99679 * 19 18 17 37 37 H 1.08999 * 109.47189 * 60.00036 * 20 18 17 38 38 H 1.09000 * 109.47328 * 180.02562 * 20 18 17 39 39 H 1.09003 * 109.47236 * 300.00112 * 20 18 17 40 40 H 1.08995 * 110.07883 * 353.93205 * 21 14 12 41 41 H 1.08995 * 110.07533 * 115.54016 * 21 14 12 42 42 H 1.08001 * 123.35293 * 179.73409 * 22 11 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2251 1.1292 0.0000 4 6 1.6356 2.5161 -0.0006 5 8 2.1433 3.2500 1.1155 6 14 2.1002 3.3877 -1.5802 7 1 1.5725 2.6250 -2.7400 8 1 1.5189 4.7541 -1.5811 9 1 3.5791 3.4783 -1.6789 10 16 3.8970 0.7891 -0.0007 11 6 3.5936 -0.9429 -0.0002 12 6 4.6230 -1.9864 0.0000 13 8 4.3092 -3.1506 0.1653 14 7 5.9170 -1.6566 -0.1827 15 6 6.2829 -0.3305 -0.6818 16 6 6.9338 0.5204 0.4036 17 6 8.3414 -0.0095 0.7175 18 14 8.1524 -1.7755 1.3169 19 6 9.8080 -2.6298 1.3159 20 6 7.4250 -1.7925 3.0318 21 6 6.9894 -2.6264 0.1234 22 6 2.2446 -1.1602 -0.0055 23 1 -0.3633 0.1236 -1.0202 24 1 -0.3634 -0.9453 0.4031 25 1 -0.3633 0.8217 0.6171 26 1 0.5501 2.4495 0.0719 27 1 3.1054 3.3488 1.1164 28 1 6.9806 -0.4430 -1.5116 29 1 5.3855 0.1753 -1.0382 30 1 7.0044 1.5523 0.0600 31 1 6.3240 0.4830 1.3063 32 1 8.9553 0.0129 -0.1830 33 1 8.8021 0.5998 1.4951 34 1 10.4917 -2.0981 1.9777 35 1 9.6879 -3.6554 1.6652 36 1 10.2131 -2.6362 0.3040 37 1 6.4465 -1.3126 3.0162 38 1 7.3194 -2.8228 3.3716 39 1 8.0840 -1.2520 3.7114 40 1 6.5668 -3.5177 0.5871 41 1 7.5229 -2.8945 -0.7884 42 1 1.8019 -2.1452 -0.0105 RHF calculation, no. of doubly occupied orbitals= 53 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_22_15766672_6739946.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:44:01 Heat of formation + Delta-G solvation = -75.030243 kcal Electronic energy + Delta-G solvation = -22685.833548 eV Core-core repulsion = 19494.870705 eV Total energy + Delta-G solvation = -3190.962843 eV No. of doubly occupied orbitals = 53 Molecular weight (most abundant/longest-lived isotopes) = 313.108 amu Computer time = 1.19 seconds Orbital eigenvalues (eV) -40.97354 -39.74326 -37.74801 -37.39600 -33.50615 -32.55967 -29.82635 -29.64051 -28.60088 -28.54685 -27.18964 -25.67243 -23.93775 -22.85095 -20.76230 -20.08101 -19.09597 -18.12662 -17.46597 -17.07868 -16.54887 -15.97293 -15.89293 -15.54716 -15.33112 -15.13042 -14.73960 -14.46013 -14.33925 -14.26523 -14.09900 -13.97212 -13.64281 -13.46599 -13.39557 -13.26995 -13.24473 -13.13419 -12.99896 -12.56557 -12.46553 -12.32549 -12.22035 -12.12373 -11.62931 -11.52215 -11.04084 -10.91682 -10.82208 -10.58825 -9.67836 -9.34330 -9.29577 -0.60364 0.34480 0.78747 0.93810 1.25613 1.27568 1.41026 1.49415 1.61171 1.69289 1.81104 1.98510 2.22310 2.41762 3.25540 3.42312 3.56820 3.62627 3.81935 4.10914 4.18327 4.21146 4.38085 4.42653 4.45948 4.49480 4.56658 4.62084 4.63300 4.66298 4.68233 4.69088 4.72676 4.84740 4.92937 4.98723 5.01638 5.19342 5.28873 5.34616 5.40968 5.42626 5.48116 6.25983 6.29847 7.10682 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.103 4.103 2 C -0.100 4.100 3 C -0.257 4.257 4 C -0.048 4.048 5 O -0.531 6.531 6 Si 0.926 3.074 7 H -0.242 1.242 8 H -0.238 1.238 9 H -0.239 1.239 10 S 0.213 5.787 11 C -0.263 4.263 12 C 0.590 3.410 13 O -0.523 6.523 14 N -0.598 5.598 15 C 0.087 3.913 16 C -0.133 4.133 17 C -0.402 4.402 18 Si 0.996 3.004 19 C -0.445 4.445 20 C -0.445 4.445 21 C -0.178 4.178 22 C -0.042 4.042 23 H 0.074 0.926 24 H 0.072 0.928 25 H 0.072 0.928 26 H 0.128 0.872 27 H 0.373 0.627 28 H 0.090 0.910 29 H 0.086 0.914 30 H 0.084 0.916 31 H 0.073 0.927 32 H 0.081 0.919 33 H 0.082 0.918 34 H 0.073 0.927 35 H 0.072 0.928 36 H 0.071 0.929 37 H 0.068 0.932 38 H 0.071 0.929 39 H 0.072 0.928 40 H 0.101 0.899 41 H 0.077 0.923 42 H 0.155 0.845 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.870 3.678 -1.160 4.808 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.161 4.161 2 C -0.112 4.112 3 C -0.375 4.375 4 C -0.160 4.160 5 O -0.336 6.336 6 Si 0.744 3.256 7 H -0.165 1.165 8 H -0.160 1.160 9 H -0.162 1.162 10 S 0.483 5.517 11 C -0.383 4.383 12 C 0.378 3.622 13 O -0.401 6.401 14 N -0.331 5.331 15 C -0.038 4.038 16 C -0.171 4.171 17 C -0.488 4.488 18 Si 1.191 2.809 19 C -0.553 4.553 20 C -0.553 4.553 21 C -0.346 4.346 22 C -0.075 4.075 23 H 0.092 0.908 24 H 0.091 0.909 25 H 0.091 0.909 26 H 0.146 0.854 27 H 0.220 0.780 28 H 0.109 0.891 29 H 0.103 0.897 30 H 0.102 0.898 31 H 0.092 0.908 32 H 0.099 0.901 33 H 0.101 0.899 34 H 0.092 0.908 35 H 0.091 0.909 36 H 0.091 0.909 37 H 0.087 0.913 38 H 0.090 0.910 39 H 0.091 0.909 40 H 0.120 0.880 41 H 0.095 0.905 42 H 0.173 0.827 Dipole moment (debyes) X Y Z Total from point charges 3.560 4.410 -1.705 5.919 hybrid contribution -0.990 -1.200 0.179 1.566 sum 2.571 3.210 -1.527 4.387 Atomic orbital electron populations 1.20625 0.89288 1.03509 1.02692 1.18626 0.98023 0.90796 1.03751 1.25092 1.01794 1.00622 1.09983 1.24596 1.02832 0.88276 1.00297 1.86592 1.26471 1.74814 1.45721 0.86056 0.82297 0.81238 0.75974 1.16475 1.16030 1.16190 1.83291 1.00605 0.98925 1.68850 1.24471 0.98014 0.96424 1.19393 1.17019 0.81295 0.87087 0.76827 1.90835 1.80755 1.18688 1.49790 1.47614 1.04996 1.14227 1.66285 1.21929 1.01035 0.82884 0.97934 1.21665 0.96456 0.99875 0.99152 1.26204 0.98294 1.17873 1.06478 0.79797 0.66362 0.67560 0.67202 1.26030 1.16474 1.08042 1.04803 1.26063 1.06903 1.04775 1.17600 1.26865 0.98290 0.99118 1.10314 1.20702 0.90961 1.00018 0.95842 0.90772 0.90933 0.90878 0.85422 0.78038 0.89141 0.89668 0.89795 0.90836 0.90061 0.89906 0.90766 0.90901 0.90936 0.91294 0.91009 0.90918 0.88015 0.90465 0.82696 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 0.09 9.53 36.01 0.34 0.43 16 2 C -0.10 -0.10 5.78 -106.45 -0.62 -0.72 16 3 C -0.26 -0.10 4.64 -35.86 -0.17 -0.26 16 4 C -0.05 0.03 2.82 36.01 0.10 0.14 16 5 O -0.53 0.04 12.88 -35.23 -0.45 -0.42 16 6 Si 0.93 -1.00 27.84 -169.99 -4.73 -5.73 16 7 H -0.24 0.03 7.11 56.52 0.40 0.43 16 8 H -0.24 0.03 7.11 56.52 0.40 0.43 16 9 H -0.24 0.38 7.11 56.52 0.40 0.78 16 10 S 0.21 -0.09 16.12 -107.50 -1.73 -1.82 16 11 C -0.26 -0.63 6.13 -36.80 -0.23 -0.85 16 12 C 0.59 2.31 7.58 -12.90 -0.10 2.21 16 13 O -0.52 -3.89 16.41 5.18 0.09 -3.81 16 14 N -0.60 -0.62 2.64 -113.22 -0.30 -0.92 16 15 C 0.09 -0.13 5.03 -4.38 -0.02 -0.16 16 16 C -0.13 0.37 4.74 -26.65 -0.13 0.24 16 17 C -0.40 1.31 5.02 37.49 0.19 1.50 16 18 Si 1.00 -2.82 11.97 -169.99 -2.03 -4.86 16 19 C -0.44 1.08 8.65 101.05 0.87 1.95 16 20 C -0.45 0.44 8.65 101.05 0.87 1.31 16 21 C -0.18 0.03 5.37 60.56 0.33 0.36 16 22 C -0.04 -0.09 9.79 -40.43 -0.40 -0.49 16 23 H 0.07 -0.13 8.14 -51.93 -0.42 -0.56 16 24 H 0.07 -0.09 8.10 -51.93 -0.42 -0.51 16 25 H 0.07 -0.10 6.90 -51.93 -0.36 -0.46 16 26 H 0.13 -0.20 6.12 -51.93 -0.32 -0.52 16 27 H 0.37 -1.20 8.37 45.56 0.38 -0.81 16 28 H 0.09 -0.26 8.11 -51.93 -0.42 -0.68 16 29 H 0.09 -0.14 3.85 -21.43 -0.08 -0.22 16 30 H 0.08 -0.33 8.14 -51.93 -0.42 -0.76 16 31 H 0.07 -0.17 7.39 -51.93 -0.38 -0.56 16 32 H 0.08 -0.31 7.99 -51.92 -0.41 -0.72 16 33 H 0.08 -0.29 7.99 -51.93 -0.41 -0.71 16 34 H 0.07 -0.18 7.96 -51.93 -0.41 -0.60 16 35 H 0.07 -0.15 7.96 -51.92 -0.41 -0.56 16 36 H 0.07 -0.19 7.96 -51.93 -0.41 -0.61 16 37 H 0.07 0.00 7.96 -51.93 -0.41 -0.41 16 38 H 0.07 -0.03 7.96 -51.93 -0.41 -0.45 16 39 H 0.07 -0.11 7.96 -51.93 -0.41 -0.52 16 40 H 0.10 0.15 7.04 -51.93 -0.37 -0.22 16 41 H 0.08 -0.09 7.99 -51.93 -0.41 -0.51 16 42 H 0.16 0.30 8.06 -52.49 -0.42 -0.12 16 LS Contribution 344.86 15.07 5.20 5.20 Total: 0.00 -6.85 344.86 -8.67 -15.52 By element: Atomic # 1 Polarization: -3.09 SS G_CDS: -5.76 Total: -8.84 kcal Atomic # 6 Polarization: 4.61 SS G_CDS: 1.06 Total: 5.67 kcal Atomic # 7 Polarization: -0.62 SS G_CDS: -0.30 Total: -0.92 kcal Atomic # 8 Polarization: -3.85 SS G_CDS: -0.37 Total: -4.22 kcal Atomic # 14 Polarization: -3.82 SS G_CDS: -6.77 Total: -10.59 kcal Atomic # 16 Polarization: -0.09 SS G_CDS: -1.73 Total: -1.82 kcal Total LS contribution 5.20 Total: 5.20 kcal Total: -6.85 -8.67 -15.52 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_15766672_6739946.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -59.508 kcal (2) G-P(sol) polarization free energy of solvation -6.852 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -66.360 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.670 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.523 kcal (6) G-S(sol) free energy of system = (1) + (5) -75.030 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.19 seconds