Wall clock time and date at job start Tue Mar 9 2021 13:34:37 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52998 * 1 3 3 O 1.42906 * 109.46836 * 2 1 4 4 C 1.35896 * 117.00250 * 275.32409 * 3 2 1 5 5 C 1.38729 * 120.05246 * 5.08634 * 4 3 2 6 6 C 1.38152 * 119.93893 * 179.70028 * 5 4 3 7 7 C 1.38259 * 120.05474 * 0.59510 * 6 5 4 8 8 C 1.50706 * 119.94262 * 179.70145 * 7 6 5 9 9 O 1.42907 * 109.47169 * 244.97695 * 8 7 6 10 10 Si 1.86301 * 109.47083 * 4.97712 * 8 7 6 11 11 C 1.38268 * 120.11405 * 359.68122 * 7 6 5 12 12 C 1.38136 * 120.05229 * 0.02562 * 11 7 6 13 13 C 1.50701 * 109.47170 * 119.99816 * 2 1 3 14 14 O 1.21277 * 120.00540 * 244.99900 * 13 2 1 15 15 N 1.34778 * 119.99462 * 65.00698 * 13 2 1 16 16 C 1.46499 * 119.99698 * 179.72352 * 15 13 2 17 17 H 1.08997 * 112.85198 * 23.80378 * 16 15 13 18 18 C 1.53788 * 113.61502 * 154.99717 * 16 15 13 19 19 C 1.53781 * 87.08136 * 89.11581 * 18 16 15 20 20 O 1.42904 * 113.61264 * 270.88352 * 19 18 16 21 21 C 1.53000 * 113.61271 * 140.06625 * 19 18 16 22 22 F 1.39898 * 109.47067 * 60.00314 * 21 19 18 23 23 F 1.39898 * 109.46631 * 180.02562 * 21 19 18 24 24 F 1.39896 * 109.46859 * 299.99690 * 21 19 18 25 25 C 1.53778 * 113.61310 * 252.49312 * 16 15 13 26 26 H 1.09004 * 109.47586 * 299.99447 * 1 2 3 27 27 H 1.09000 * 109.47253 * 59.99942 * 1 2 3 28 28 H 1.09007 * 109.47182 * 179.97438 * 1 2 3 29 29 H 1.08996 * 109.47324 * 240.00464 * 2 1 3 30 30 H 1.07996 * 120.03369 * 359.97438 * 5 4 3 31 31 H 1.07998 * 119.96943 * 180.27481 * 6 5 4 32 32 H 1.09001 * 109.47174 * 124.97931 * 8 7 6 33 33 H 0.96705 * 113.99320 * 60.00020 * 9 8 7 34 34 H 1.48495 * 109.99570 * 58.68353 * 10 8 7 35 35 H 1.48498 * 109.99650 * 180.02562 * 10 8 7 36 36 H 1.07997 * 119.97430 * 180.02562 * 11 7 6 37 37 H 1.08007 * 120.02791 * 180.02562 * 12 11 7 38 38 H 0.97000 * 120.00629 * 359.97438 * 15 13 2 39 39 H 1.09000 * 113.61659 * 203.66680 * 18 16 15 40 40 H 1.09004 * 113.61312 * 334.47997 * 18 16 15 41 41 H 0.96696 * 113.99496 * 179.97438 * 20 19 18 42 42 H 1.09000 * 113.61547 * 25.43349 * 25 16 15 43 43 H 1.09009 * 113.61734 * 156.33814 * 25 16 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0063 1.3474 0.0000 4 6 2.1060 1.9665 -1.2056 5 6 1.6543 1.3305 -2.3528 6 6 1.7512 1.9646 -3.5763 7 6 2.3089 3.2270 -3.6597 8 6 2.4194 3.9136 -4.9967 9 8 3.7980 4.0837 -5.3324 10 14 1.5867 2.8742 -6.2994 11 6 2.7650 3.8607 -2.5186 12 6 2.6649 3.2333 -1.2920 13 6 2.0323 -0.7104 1.2305 14 8 2.6530 -0.0980 2.0734 15 7 1.7920 -2.0264 1.3941 16 6 2.2855 -2.7183 2.5873 17 1 2.4506 -2.0456 3.4288 18 6 1.4742 -3.9729 2.9517 19 6 2.4274 -4.7593 2.0363 20 8 1.9968 -4.8158 0.6749 21 6 2.8201 -6.1294 2.5927 22 9 1.6714 -6.9086 2.7671 23 9 3.6845 -6.7663 1.6959 24 9 3.4640 -5.9656 3.8238 25 6 3.4684 -3.6604 2.3080 26 1 -0.3634 0.5138 0.8900 27 1 -0.3634 0.5138 -0.8900 28 1 -0.3634 -1.0277 -0.0005 29 1 1.8933 -0.5137 -0.8900 30 1 1.2234 0.3423 -2.2888 31 1 1.3957 1.4717 -4.4691 32 1 1.9350 4.8888 -4.9455 33 1 4.2925 3.2550 -5.3954 34 1 0.1600 2.6635 -5.9455 35 1 1.6893 3.5402 -7.6227 36 1 3.1998 4.8469 -2.5863 37 1 3.0209 3.7289 -0.4008 38 1 1.2953 -2.5163 0.7200 39 1 1.5493 -4.2515 4.0028 40 1 0.4450 -3.9467 2.5934 41 1 2.5924 -5.3087 0.0942 42 1 4.0497 -3.3826 1.4288 43 1 4.0889 -3.8537 3.1832 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_17047570_10157680.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:34:37 Heat of formation + Delta-G solvation = -238.377300 kcal Electronic energy + Delta-G solvation = -32777.373577 eV Core-core repulsion = 27569.118020 eV Total energy + Delta-G solvation = -5208.255557 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 362.122 amu Computer time = 0.99 seconds Orbital eigenvalues (eV) -51.22903 -48.77526 -48.70943 -41.96664 -41.26971 -40.06026 -38.93833 -37.14902 -36.42823 -34.58925 -32.96788 -31.85393 -31.48030 -28.77816 -27.17478 -26.71146 -25.63620 -24.36635 -23.74307 -22.51542 -21.57752 -21.01923 -20.04180 -19.54051 -19.52147 -19.38229 -18.53717 -18.08335 -17.31872 -17.06515 -16.86282 -16.71741 -16.42489 -16.14803 -15.82132 -15.69883 -15.63588 -15.53618 -15.28337 -15.15313 -15.12010 -14.88966 -14.88197 -14.68532 -14.63182 -14.43731 -14.09064 -13.90274 -13.79966 -13.64608 -13.45557 -13.29346 -12.93314 -12.86323 -12.62266 -12.25208 -12.05877 -12.02850 -11.91353 -11.69545 -11.22725 -10.96590 -10.39207 -10.26977 -10.04557 -9.22852 -4.98368 0.26763 0.29736 1.34838 1.36172 1.43361 1.52661 1.66361 2.00150 2.36130 2.49165 2.59915 2.64901 2.66875 2.86500 3.36670 3.41169 3.51311 3.55944 3.57845 3.67888 3.73121 3.84162 3.88032 3.94885 4.23492 4.28947 4.36420 4.47547 4.47838 4.49575 4.58927 4.61283 4.68062 4.70878 4.73074 4.77986 4.96583 5.09557 5.18290 5.25225 5.36743 5.49600 5.69500 6.22570 6.29872 6.44865 6.80420 7.06432 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.174 4.174 2 C 0.064 3.936 3 O -0.313 6.313 4 C 0.122 3.878 5 C -0.202 4.202 6 C -0.072 4.072 7 C -0.161 4.161 8 C -0.074 4.074 9 O -0.559 6.559 10 Si 0.781 3.219 11 C -0.061 4.061 12 C -0.167 4.167 13 C 0.521 3.479 14 O -0.566 6.566 15 N -0.687 5.687 16 C 0.128 3.872 17 H 0.105 0.895 18 C -0.119 4.119 19 C 0.073 3.927 20 O -0.514 6.514 21 C 0.431 3.569 22 F -0.184 7.184 23 F -0.186 7.186 24 F -0.179 7.179 25 C -0.166 4.166 26 H 0.058 0.942 27 H 0.087 0.913 28 H 0.109 0.891 29 H 0.131 0.869 30 H 0.163 0.837 31 H 0.156 0.844 32 H 0.102 0.898 33 H 0.395 0.605 34 H -0.281 1.281 35 H -0.304 1.304 36 H 0.132 0.868 37 H 0.126 0.874 38 H 0.422 0.578 39 H 0.131 0.869 40 H 0.111 0.889 41 H 0.406 0.594 42 H 0.096 0.904 43 H 0.119 0.881 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.239 -6.134 -3.509 7.413 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.231 4.231 2 C 0.005 3.995 3 O -0.226 6.226 4 C 0.077 3.923 5 C -0.220 4.220 6 C -0.090 4.090 7 C -0.162 4.162 8 C -0.183 4.183 9 O -0.367 6.367 10 Si 0.687 3.313 11 C -0.079 4.079 12 C -0.186 4.186 13 C 0.307 3.693 14 O -0.443 6.443 15 N -0.341 5.341 16 C 0.022 3.978 17 H 0.123 0.877 18 C -0.157 4.157 19 C 0.029 3.971 20 O -0.324 6.324 21 C 0.377 3.623 22 F -0.165 7.165 23 F -0.168 7.168 24 F -0.161 7.161 25 C -0.205 4.205 26 H 0.078 0.922 27 H 0.105 0.895 28 H 0.127 0.873 29 H 0.149 0.851 30 H 0.181 0.819 31 H 0.173 0.827 32 H 0.120 0.880 33 H 0.245 0.755 34 H -0.208 1.208 35 H -0.233 1.233 36 H 0.150 0.850 37 H 0.144 0.856 38 H 0.261 0.739 39 H 0.149 0.851 40 H 0.129 0.871 41 H 0.259 0.741 42 H 0.115 0.885 43 H 0.137 0.863 Dipole moment (debyes) X Y Z Total from point charges -3.035 -4.746 -3.073 6.417 hybrid contribution 0.467 -0.244 0.210 0.567 sum -2.569 -4.989 -2.863 6.300 Atomic orbital electron populations 1.22381 0.90615 1.05707 1.04423 1.22416 0.97094 0.82093 0.97891 1.86194 1.81423 1.27042 1.27986 1.19220 0.95779 0.92875 0.84441 1.21504 1.06262 1.02754 0.91501 1.21054 0.96575 0.93438 0.97899 1.20354 1.03510 0.96320 0.95993 1.25194 0.88721 1.05562 0.98842 1.86473 1.20618 1.37399 1.92181 0.93803 0.78528 0.85319 0.73621 1.20914 0.96509 0.99736 0.90717 1.20618 1.04396 0.94457 0.99093 1.20517 0.78879 0.82523 0.87427 1.90759 1.41394 1.67012 1.45171 1.45403 1.57079 1.07727 1.23918 1.21597 0.94152 0.93058 0.88953 0.87660 1.23580 1.00239 0.91611 1.00244 1.23577 1.00236 0.86810 0.86509 1.86485 1.52982 1.77768 1.15128 1.21524 0.74712 0.89627 0.76467 1.93212 1.50154 1.77819 1.95357 1.93182 1.71210 1.84590 1.67815 1.93187 1.82251 1.95546 1.45069 1.24243 0.97254 0.93630 1.05370 0.92243 0.89452 0.87267 0.85142 0.81943 0.82707 0.88043 0.75535 1.20815 1.23251 0.85004 0.85638 0.73863 0.85067 0.87075 0.74051 0.88523 0.86317 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.17 1.19 9.12 71.98 0.66 1.85 16 2 C 0.06 -0.16 2.64 29.85 0.08 -0.08 16 3 O -0.31 -1.77 9.34 -73.40 -0.69 -2.46 16 4 C 0.12 0.38 6.60 22.50 0.15 0.53 16 5 C -0.20 0.60 8.23 22.37 0.18 0.78 16 6 C -0.07 0.26 8.66 22.25 0.19 0.45 16 7 C -0.16 0.03 5.35 -19.85 -0.11 -0.08 16 8 C -0.07 0.06 2.80 71.24 0.20 0.26 16 9 O -0.56 -0.21 12.83 -148.98 -1.91 -2.13 16 10 Si 0.78 -2.82 29.80 68.60 2.04 -0.78 16 11 C -0.06 -0.17 9.68 22.25 0.22 0.05 16 12 C -0.17 -0.79 9.99 22.36 0.22 -0.57 16 13 C 0.52 0.92 7.18 87.66 0.63 1.55 16 14 O -0.57 -7.14 16.11 15.97 0.26 -6.89 16 15 N -0.69 3.66 5.11 -440.04 -2.25 1.41 16 16 C 0.13 -0.61 4.33 45.52 0.20 -0.41 16 17 H 0.11 -0.11 7.46 -2.39 -0.02 -0.12 16 18 C -0.12 0.95 7.01 31.12 0.22 1.17 16 19 C 0.07 -0.52 1.36 -10.27 -0.01 -0.53 16 20 O -0.51 4.98 12.13 -148.98 -1.81 3.17 16 21 C 0.43 -1.24 2.85 71.98 0.21 -1.04 16 22 F -0.18 -0.04 17.18 44.97 0.77 0.73 16 23 F -0.19 0.31 16.65 44.97 0.75 1.06 16 24 F -0.18 0.19 15.76 44.97 0.71 0.90 16 25 C -0.17 1.04 7.15 31.12 0.22 1.26 16 26 H 0.06 -0.15 8.14 -2.38 -0.02 -0.17 16 27 H 0.09 -0.69 6.91 -2.39 -0.02 -0.71 16 28 H 0.11 -1.39 7.92 -2.38 -0.02 -1.41 16 29 H 0.13 -1.17 6.31 -2.39 -0.02 -1.19 16 30 H 0.16 -1.57 5.43 -2.91 -0.02 -1.58 16 31 H 0.16 -1.43 4.90 -2.91 -0.01 -1.44 16 32 H 0.10 0.09 7.96 -2.39 -0.02 0.07 16 33 H 0.39 -3.11 8.70 -74.05 -0.64 -3.75 16 34 H -0.28 -0.11 7.11 99.48 0.71 0.60 16 35 H -0.30 -1.41 7.11 99.48 0.71 -0.70 16 36 H 0.13 0.26 8.06 -2.91 -0.02 0.24 16 37 H 0.13 0.67 8.06 -2.91 -0.02 0.65 16 38 H 0.42 -4.41 7.37 -92.71 -0.68 -5.10 16 39 H 0.13 -1.23 7.88 -2.39 -0.02 -1.25 16 40 H 0.11 -1.03 8.14 -2.38 -0.02 -1.05 16 41 H 0.41 -5.89 8.42 -74.06 -0.62 -6.51 16 42 H 0.10 -0.59 8.14 -2.39 -0.02 -0.61 16 43 H 0.12 -0.76 7.14 -2.38 -0.02 -0.78 16 Total: 0.00 -24.95 369.02 0.33 -24.62 By element: Atomic # 1 Polarization: -24.03 SS G_CDS: -0.80 Total: -24.82 kcal Atomic # 6 Polarization: 1.93 SS G_CDS: 3.25 Total: 5.18 kcal Atomic # 7 Polarization: 3.66 SS G_CDS: -2.25 Total: 1.41 kcal Atomic # 8 Polarization: -4.15 SS G_CDS: -4.15 Total: -8.30 kcal Atomic # 9 Polarization: 0.46 SS G_CDS: 2.23 Total: 2.69 kcal Atomic # 14 Polarization: -2.82 SS G_CDS: 2.04 Total: -0.78 kcal Total: -24.95 0.33 -24.62 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_17047570_10157680.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -213.759 kcal (2) G-P(sol) polarization free energy of solvation -24.949 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -238.708 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.331 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.618 kcal (6) G-S(sol) free energy of system = (1) + (5) -238.377 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.99 seconds