Wall clock time and date at job start Tue Mar 9 2021 13:34:52 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42893 * 1 3 3 C 1.35660 * 117.00182 * 2 1 4 4 C 1.38405 * 120.11813 * 359.97438 * 3 2 1 5 5 C 1.38726 * 120.02919 * 180.02562 * 4 3 2 6 6 O 1.35709 * 119.86025 * 179.97438 * 5 4 3 7 7 C 1.42901 * 117.00541 * 359.97438 * 6 5 4 8 8 C 1.39149 * 120.27582 * 359.97438 * 5 4 3 9 9 C 1.50694 * 119.88132 * 180.02562 * 8 5 4 10 10 O 1.42908 * 109.46784 * 284.99793 * 9 8 5 11 11 Si 1.86293 * 109.47285 * 165.00141 * 9 8 5 12 12 C 1.37584 * 120.23632 * 359.74350 * 8 5 4 13 13 C 1.39816 * 119.96688 * 0.51843 * 12 8 5 14 14 C 1.47302 * 120.13904 * 179.76516 * 13 12 8 15 15 O 1.21617 * 120.00323 * 179.72001 * 14 13 12 16 16 N 1.34779 * 119.99422 * 359.71688 * 14 13 12 17 17 C 1.46506 * 119.99785 * 180.02562 * 16 14 13 18 18 H 1.08997 * 112.84778 * 23.80452 * 17 16 14 19 19 C 1.53776 * 113.61677 * 155.00068 * 17 16 14 20 20 C 1.53774 * 87.08408 * 89.11606 * 19 17 16 21 21 O 1.42903 * 113.61673 * 270.88945 * 20 19 17 22 22 C 1.53000 * 113.61561 * 140.06618 * 20 19 17 23 23 F 1.39903 * 109.46774 * 181.53048 * 22 20 19 24 24 F 1.39896 * 109.46912 * 301.52777 * 22 20 19 25 25 F 1.39893 * 109.47116 * 61.53444 * 22 20 19 26 26 C 1.53777 * 87.08184 * 25.43089 * 20 19 17 27 27 H 1.09004 * 109.47251 * 300.00188 * 1 2 3 28 28 H 1.09006 * 109.46930 * 60.00124 * 1 2 3 29 29 H 1.08997 * 109.47699 * 180.02562 * 1 2 3 30 30 H 1.07996 * 119.98547 * 359.97438 * 4 3 2 31 31 H 1.09005 * 109.46874 * 300.00426 * 7 6 5 32 32 H 1.09002 * 109.46979 * 59.99780 * 7 6 5 33 33 H 1.08995 * 109.47182 * 180.02562 * 7 6 5 34 34 H 1.08995 * 109.47560 * 44.99586 * 9 8 5 35 35 H 0.96701 * 114.00031 * 179.97438 * 10 9 8 36 36 H 1.48497 * 110.00155 * 298.67920 * 11 9 8 37 37 H 1.48498 * 110.00111 * 59.99679 * 11 9 8 38 38 H 1.07998 * 120.01429 * 180.25370 * 12 8 5 39 39 H 0.96997 * 120.00900 * 0.02562 * 16 14 13 40 40 H 1.09002 * 113.61135 * 334.56699 * 19 17 16 41 41 H 1.08996 * 113.61949 * 203.66777 * 19 17 16 42 42 H 0.96700 * 114.00311 * 179.97438 * 21 20 19 43 43 H 1.09007 * 113.61025 * 89.11391 * 26 20 19 44 44 H 1.08997 * 113.62410 * 220.02130 * 26 20 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4289 0.0000 0.0000 3 6 2.0449 1.2087 0.0000 4 6 1.2935 2.3711 -0.0005 5 6 1.9252 3.6061 -0.0011 6 8 1.1851 4.7436 -0.0021 7 6 -0.2359 4.5932 -0.0032 8 6 3.3146 3.6834 -0.0005 9 6 3.9916 5.0297 -0.0005 10 8 3.8946 5.6116 -1.3022 11 14 5.7861 4.8225 0.4548 12 6 4.0724 2.5351 0.0058 13 6 3.4461 1.2851 0.0009 14 6 4.2538 0.0532 0.0025 15 8 3.7065 -1.0328 0.0033 16 7 5.5994 0.1298 0.0030 17 6 6.4028 -1.0954 0.0040 18 1 5.8665 -1.9535 -0.4012 19 6 7.8087 -0.9107 -0.5910 20 6 8.2746 -0.5406 0.8269 21 8 8.1618 0.8533 1.1210 22 6 9.6446 -1.1158 1.1916 23 9 9.9664 -0.7570 2.5050 24 9 9.6083 -2.5102 1.0848 25 9 10.6117 -0.6061 0.3188 26 6 7.0944 -1.3773 1.3482 27 1 -0.3634 0.5139 0.8900 28 1 -0.3633 0.5138 -0.8900 29 1 -0.3634 -1.0276 0.0005 30 1 0.2149 2.3165 -0.0014 31 1 -0.5424 4.0435 -0.8932 32 1 -0.5438 4.0443 0.8868 33 1 -0.7054 5.5768 -0.0044 34 1 3.5054 5.6810 0.7257 35 1 4.3097 6.4819 -1.3759 36 1 5.9008 4.2476 1.8191 37 1 6.4604 3.9365 -0.5279 38 1 5.1504 2.5993 0.0104 39 1 6.0360 0.9959 0.0026 40 1 7.8772 -0.0872 -1.3020 41 1 8.2482 -1.8341 -0.9679 42 1 8.4530 1.0923 2.0116 43 1 7.3386 -2.4286 1.5015 44 1 6.5862 -0.9308 2.2028 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_17047570_12297780.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:34:52 Heat of formation + Delta-G solvation = -267.268055 kcal Electronic energy + Delta-G solvation = -36601.875656 eV Core-core repulsion = 31073.685110 eV Total energy + Delta-G solvation = -5528.190546 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 378.121 amu Computer time = 1.10 seconds Orbital eigenvalues (eV) -51.28842 -48.82928 -48.76425 -42.26535 -41.47029 -40.28998 -39.62370 -38.38964 -37.08345 -36.53404 -34.31924 -32.44461 -31.78289 -29.05341 -28.90487 -28.12042 -27.25256 -26.10895 -25.13243 -23.99967 -22.86081 -21.73661 -21.06016 -20.21571 -20.00590 -19.58187 -19.46474 -18.73577 -18.38550 -18.17920 -17.47214 -17.16378 -17.15032 -16.90178 -16.59150 -16.46542 -16.20025 -15.96240 -15.82682 -15.62770 -15.54963 -15.31803 -15.25709 -15.20852 -14.95719 -14.94213 -14.77038 -14.45975 -14.20400 -13.94878 -13.94765 -13.90747 -13.68010 -13.48465 -13.00421 -12.76840 -12.71662 -12.59384 -12.56890 -12.19516 -11.98687 -11.94472 -11.74168 -11.31534 -11.11161 -10.32319 -10.22287 -10.03736 -9.30779 -4.93140 -0.40948 -0.05173 1.31700 1.44587 1.55414 1.68911 1.84441 1.95799 2.01696 2.08358 2.34928 2.43591 2.51389 2.59230 2.78865 3.24454 3.33962 3.37466 3.44213 3.46565 3.60508 3.63089 3.92683 3.95995 4.08299 4.15954 4.17034 4.23601 4.23943 4.28100 4.36942 4.39923 4.42389 4.56911 4.60307 4.63573 4.65944 4.66970 4.69824 4.81927 4.94227 5.15875 5.34183 5.94705 6.14195 6.19942 6.34789 6.96016 7.04755 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.009 3.991 2 O -0.302 6.302 3 C 0.221 3.779 4 C -0.308 4.308 5 C 0.219 3.781 6 O -0.306 6.306 7 C 0.010 3.990 8 C -0.169 4.169 9 C -0.066 4.066 10 O -0.562 6.562 11 Si 0.760 3.240 12 C -0.014 4.014 13 C -0.233 4.233 14 C 0.567 3.433 15 O -0.554 6.554 16 N -0.704 5.704 17 C 0.127 3.873 18 H 0.112 0.888 19 C -0.121 4.121 20 C 0.068 3.932 21 O -0.523 6.523 22 C 0.436 3.564 23 F -0.185 7.185 24 F -0.175 7.175 25 F -0.182 7.182 26 C -0.163 4.163 27 H 0.074 0.926 28 H 0.072 0.928 29 H 0.116 0.884 30 H 0.171 0.829 31 H 0.067 0.933 32 H 0.071 0.929 33 H 0.125 0.875 34 H 0.083 0.917 35 H 0.400 0.600 36 H -0.278 1.278 37 H -0.276 1.276 38 H 0.142 0.858 39 H 0.407 0.593 40 H 0.102 0.898 41 H 0.140 0.860 42 H 0.405 0.595 43 H 0.127 0.873 44 H 0.092 0.908 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.394 6.292 1.235 6.844 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.085 4.085 2 O -0.213 6.213 3 C 0.172 3.828 4 C -0.328 4.328 5 C 0.170 3.830 6 O -0.217 6.217 7 C -0.084 4.084 8 C -0.170 4.170 9 C -0.175 4.175 10 O -0.372 6.372 11 Si 0.663 3.337 12 C -0.032 4.032 13 C -0.237 4.237 14 C 0.356 3.644 15 O -0.433 6.433 16 N -0.357 5.357 17 C 0.022 3.978 18 H 0.130 0.870 19 C -0.159 4.159 20 C 0.024 3.976 21 O -0.332 6.332 22 C 0.382 3.618 23 F -0.167 7.167 24 F -0.157 7.157 25 F -0.164 7.164 26 C -0.202 4.202 27 H 0.092 0.908 28 H 0.090 0.910 29 H 0.134 0.866 30 H 0.188 0.812 31 H 0.085 0.915 32 H 0.090 0.910 33 H 0.143 0.857 34 H 0.101 0.899 35 H 0.251 0.749 36 H -0.204 1.204 37 H -0.203 1.203 38 H 0.159 0.841 39 H 0.245 0.755 40 H 0.121 0.879 41 H 0.158 0.842 42 H 0.258 0.742 43 H 0.145 0.855 44 H 0.110 0.890 Dipole moment (debyes) X Y Z Total from point charges -2.552 4.440 0.758 5.177 hybrid contribution -0.244 -0.054 0.744 0.784 sum -2.795 4.386 1.501 5.414 Atomic orbital electron populations 1.23525 0.76194 1.06013 1.02814 1.86357 1.23493 1.25518 1.85925 1.18887 0.90671 0.85033 0.88248 1.21481 1.02263 0.90522 1.18490 1.18850 0.90586 0.85312 0.88237 1.86122 1.21210 1.28128 1.86274 1.23527 0.75977 1.06227 1.02642 1.18808 0.90842 0.95311 1.12088 1.24646 1.11517 0.92181 0.89192 1.86462 1.82692 1.39194 1.28850 0.94260 0.74816 0.87662 0.76927 1.20841 0.99256 0.90100 0.93030 1.19104 0.91299 0.93469 1.19794 1.17997 0.82262 0.88446 0.75667 1.90807 1.72117 1.29737 1.50616 1.45565 1.05055 1.09848 1.75224 1.21646 0.91140 0.88595 0.96426 0.86971 1.23617 0.93887 1.05319 0.93049 1.23622 0.87710 0.84679 1.01580 1.86508 1.87573 1.19090 1.40041 1.21335 0.89344 0.76656 0.74506 1.93185 1.94136 1.91501 1.37833 1.93190 1.96668 1.30068 1.95737 1.93212 1.66808 1.86900 1.69461 1.24234 0.94204 1.02319 0.99428 0.90772 0.90952 0.86583 0.81186 0.91459 0.90997 0.85688 0.89877 0.74896 1.20435 1.20330 0.84075 0.75499 0.87947 0.84234 0.74165 0.85535 0.88983 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.01 9.81 113.37 1.11 1.11 16 2 O -0.30 -2.96 8.56 -68.80 -0.59 -3.55 16 3 C 0.22 1.97 6.70 22.82 0.15 2.12 16 4 C -0.31 -1.21 8.01 22.43 0.18 -1.03 16 5 C 0.22 1.15 6.67 22.61 0.15 1.30 16 6 O -0.31 -0.83 9.80 -90.30 -0.88 -1.71 16 7 C 0.01 -0.05 9.81 113.37 1.11 1.06 16 8 C -0.17 -1.01 5.31 -19.80 -0.11 -1.11 16 9 C -0.07 -0.05 2.36 71.23 0.17 0.12 16 10 O -0.56 -0.60 12.86 -148.98 -1.92 -2.52 16 11 Si 0.76 -2.15 30.18 68.60 2.07 -0.08 16 12 C -0.01 -0.09 8.14 22.50 0.18 0.09 16 13 C -0.23 -2.30 5.89 -20.00 -0.12 -2.41 16 14 C 0.57 6.50 7.76 86.63 0.67 7.17 16 15 O -0.55 -9.87 14.75 16.88 0.25 -9.62 16 16 N -0.70 -3.63 5.10 -443.42 -2.26 -5.89 16 17 C 0.13 0.23 4.32 45.51 0.20 0.43 16 18 H 0.11 0.44 7.46 -2.39 -0.02 0.42 16 19 C -0.12 0.26 7.03 31.12 0.22 0.48 16 20 C 0.07 -0.11 1.34 -10.27 -0.01 -0.12 16 21 O -0.52 1.15 12.14 -148.98 -1.81 -0.66 16 22 C 0.44 0.27 2.84 71.98 0.20 0.48 16 23 F -0.19 -0.28 16.69 44.97 0.75 0.47 16 24 F -0.18 -0.25 15.75 44.97 0.71 0.46 16 25 F -0.18 -0.62 17.20 44.97 0.77 0.15 16 26 C -0.16 0.18 7.15 31.12 0.22 0.40 16 27 H 0.07 -0.32 7.66 -2.38 -0.02 -0.34 16 28 H 0.07 -0.28 7.66 -2.38 -0.02 -0.29 16 29 H 0.12 -0.34 8.14 -2.39 -0.02 -0.35 16 30 H 0.17 -0.40 4.50 -2.91 -0.01 -0.41 16 31 H 0.07 -0.44 7.65 -2.38 -0.02 -0.46 16 32 H 0.07 -0.55 7.65 -2.39 -0.02 -0.57 16 33 H 0.12 -1.11 8.14 -2.39 -0.02 -1.13 16 34 H 0.08 -0.13 7.82 -2.39 -0.02 -0.14 16 35 H 0.40 -3.77 8.74 -74.06 -0.65 -4.41 16 36 H -0.28 -0.45 7.11 99.48 0.71 0.26 16 37 H -0.28 -0.59 6.75 99.48 0.67 0.08 16 38 H 0.14 0.56 3.20 -2.91 -0.01 0.55 16 39 H 0.41 1.23 5.61 -92.71 -0.52 0.71 16 40 H 0.10 -0.20 8.14 -2.39 -0.02 -0.22 16 41 H 0.14 -0.75 7.83 -2.39 -0.02 -0.77 16 42 H 0.41 -3.17 8.47 -74.06 -0.63 -3.80 16 43 H 0.13 -0.39 7.18 -2.38 -0.02 -0.40 16 44 H 0.09 -0.01 8.14 -2.39 -0.02 -0.03 16 Total: 0.00 -24.96 373.98 0.77 -24.19 By element: Atomic # 1 Polarization: -10.66 SS G_CDS: -0.66 Total: -11.32 kcal Atomic # 6 Polarization: 5.73 SS G_CDS: 4.34 Total: 10.07 kcal Atomic # 7 Polarization: -3.63 SS G_CDS: -2.26 Total: -5.89 kcal Atomic # 8 Polarization: -13.11 SS G_CDS: -4.95 Total: -18.06 kcal Atomic # 9 Polarization: -1.15 SS G_CDS: 2.23 Total: 1.08 kcal Atomic # 14 Polarization: -2.15 SS G_CDS: 2.07 Total: -0.08 kcal Total: -24.96 0.77 -24.19 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_17047570_12297780.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -243.078 kcal (2) G-P(sol) polarization free energy of solvation -24.957 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -268.036 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.767 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.190 kcal (6) G-S(sol) free energy of system = (1) + (5) -267.268 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.10 seconds