Wall clock time and date at job start Tue Mar 9 2021 13:34:58 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42902 * 1 3 3 Si 1.86296 * 109.47175 * 2 1 4 4 C 1.50693 * 109.47052 * 239.99730 * 2 1 3 5 5 C 1.38233 * 120.00207 * 299.99585 * 4 2 1 6 6 C 1.38234 * 120.00037 * 179.72405 * 5 4 2 7 7 C 1.38234 * 120.00240 * 0.26327 * 6 5 4 8 8 C 1.50701 * 120.00243 * 180.02562 * 7 6 5 9 9 C 1.50697 * 109.47131 * 90.00118 * 8 7 6 10 10 O 1.21290 * 120.00008 * 359.97438 * 9 8 7 11 11 N 1.34776 * 120.00395 * 180.02562 * 9 8 7 12 12 C 1.46493 * 120.00176 * 180.02562 * 11 9 8 13 13 H 1.09001 * 112.85365 * 336.19296 * 12 11 9 14 14 C 1.53786 * 113.61719 * 107.50139 * 12 11 9 15 15 C 1.53783 * 87.08070 * 89.11431 * 14 12 11 16 16 O 1.42899 * 113.61329 * 270.88765 * 15 14 12 17 17 C 1.52998 * 113.69164 * 139.99540 * 15 14 12 18 18 F 1.39906 * 109.47014 * 322.46411 * 17 15 14 19 19 F 1.39897 * 109.47390 * 82.46023 * 17 15 14 20 20 F 1.39896 * 109.47073 * 202.46556 * 17 15 14 21 21 C 1.53783 * 87.08108 * 25.43524 * 15 14 12 22 22 C 1.38238 * 119.99693 * 359.97438 * 7 6 5 23 23 C 1.38234 * 120.00082 * 0.02562 * 22 7 6 24 24 H 0.96695 * 113.99708 * 60.00125 * 1 2 3 25 25 H 1.09001 * 109.47057 * 119.99805 * 2 1 3 26 26 H 1.48495 * 110.00434 * 59.99632 * 3 2 1 27 27 H 1.48500 * 110.00121 * 181.31858 * 3 2 1 28 28 H 1.08002 * 120.00157 * 0.02562 * 5 4 2 29 29 H 1.07999 * 120.00009 * 180.28389 * 6 5 4 30 30 H 1.08996 * 109.47280 * 210.00015 * 8 7 6 31 31 H 1.08999 * 109.46887 * 329.99909 * 8 7 6 32 32 H 0.96999 * 119.99466 * 359.97438 * 11 9 8 33 33 H 1.08999 * 113.61374 * 203.66377 * 14 12 11 34 34 H 1.08993 * 113.61243 * 334.56650 * 14 12 11 35 35 H 0.96701 * 113.99748 * 277.49371 * 16 15 14 36 36 H 1.09003 * 113.60991 * 220.02058 * 21 15 14 37 37 H 1.08993 * 113.61654 * 89.11837 * 21 15 14 38 38 H 1.08001 * 119.99643 * 179.97438 * 22 7 6 39 39 H 1.07999 * 120.00025 * 179.97438 * 23 22 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7104 -1.2304 5 6 1.5975 -2.0339 -1.4491 6 6 2.0535 -2.6839 -2.5806 7 6 2.8480 -2.0121 -3.4908 8 6 3.3447 -2.7205 -4.7246 9 6 2.3496 -2.5407 -5.8420 10 8 1.3365 -1.9007 -5.6547 11 7 2.5849 -3.0919 -7.0492 12 6 1.6178 -2.9166 -8.1355 13 1 0.6107 -2.7059 -7.7758 14 6 2.0949 -1.9539 -9.2357 15 6 2.7255 -3.1767 -9.9227 16 8 4.0659 -3.4409 -9.5036 17 6 2.5682 -3.1760 -11.4446 18 9 1.3103 -2.6655 -11.7831 19 9 3.5646 -2.3774 -12.0161 20 9 2.6855 -4.4842 -11.9262 21 6 1.6731 -4.0298 -9.1951 22 6 3.1859 -0.6900 -3.2696 23 6 2.7298 -0.0400 -2.1381 24 1 -0.3932 0.4417 -0.7650 25 1 1.7923 -0.5138 0.8900 26 1 1.5615 2.4679 1.2084 27 1 3.5346 1.7703 -0.0321 28 1 0.9763 -2.5587 -0.7383 29 1 1.7889 -3.7166 -2.7537 30 1 4.3054 -2.3007 -5.0227 31 1 3.4630 -3.7828 -4.5108 32 1 3.3949 -3.6041 -7.1988 33 1 1.2816 -1.5042 -9.8052 34 1 2.8253 -1.2228 -8.8894 35 1 4.7323 -2.9074 -9.9578 36 1 2.0630 -4.9745 -8.8159 37 1 0.7445 -4.1477 -9.7535 38 1 3.8069 -0.1652 -3.9805 39 1 2.9942 0.9928 -1.9651 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_17047570_12335836.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:34:58 Heat of formation + Delta-G solvation = -209.788313 kcal Electronic energy + Delta-G solvation = -28346.706284 eV Core-core repulsion = 23613.910250 eV Total energy + Delta-G solvation = -4732.796034 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 332.107 amu Computer time = 0.77 seconds Orbital eigenvalues (eV) -51.23492 -48.78060 -48.71669 -41.62652 -40.70560 -39.63255 -37.63191 -36.38638 -34.29443 -33.73414 -31.91993 -29.92455 -28.55411 -27.14824 -25.85482 -24.03845 -23.79540 -22.41151 -21.39259 -20.92387 -20.02421 -19.52671 -19.40600 -18.44262 -18.04015 -17.37140 -17.00536 -16.93817 -16.50983 -16.31186 -16.03122 -15.93553 -15.63828 -15.52895 -15.35945 -15.15969 -14.94247 -14.89676 -14.81512 -14.72411 -14.65820 -14.47717 -14.05928 -13.90749 -13.74711 -13.27390 -13.01829 -12.92842 -12.75447 -12.56352 -12.25606 -11.97255 -11.87206 -11.68823 -11.20716 -10.99022 -10.44523 -10.11773 -9.86285 -9.59286 -5.00554 0.25262 0.46892 1.30939 1.52721 1.60771 1.62565 1.92891 2.06747 2.45214 2.59290 2.66950 2.80637 2.88360 3.42135 3.50192 3.51837 3.56351 3.64306 3.81077 3.92805 4.04580 4.07012 4.27568 4.37385 4.47137 4.48834 4.49634 4.52376 4.64023 4.70677 4.73493 4.78020 4.81001 5.04278 5.10324 5.39303 5.51634 5.55144 5.60633 6.03237 6.27437 6.57995 6.72432 7.27491 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.558 6.558 2 C -0.077 4.077 3 Si 0.775 3.225 4 C -0.128 4.128 5 C -0.108 4.108 6 C -0.116 4.116 7 C -0.071 4.071 8 C -0.098 4.098 9 C 0.518 3.482 10 O -0.573 6.573 11 N -0.699 5.699 12 C 0.131 3.869 13 H 0.104 0.896 14 C -0.164 4.164 15 C 0.072 3.928 16 O -0.515 6.515 17 C 0.431 3.569 18 F -0.179 7.179 19 F -0.187 7.187 20 F -0.185 7.185 21 C -0.122 4.122 22 C -0.109 4.109 23 C -0.124 4.124 24 H 0.394 0.606 25 H 0.105 0.895 26 H -0.299 1.299 27 H -0.282 1.282 28 H 0.122 0.878 29 H 0.132 0.868 30 H 0.131 0.869 31 H 0.127 0.873 32 H 0.419 0.581 33 H 0.117 0.883 34 H 0.096 0.904 35 H 0.405 0.595 36 H 0.106 0.894 37 H 0.129 0.871 38 H 0.142 0.858 39 H 0.141 0.859 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.599 -0.669 -3.125 4.813 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.365 6.365 2 C -0.187 4.187 3 Si 0.681 3.319 4 C -0.128 4.128 5 C -0.127 4.127 6 C -0.134 4.134 7 C -0.071 4.071 8 C -0.138 4.138 9 C 0.306 3.694 10 O -0.451 6.451 11 N -0.352 5.352 12 C 0.024 3.976 13 H 0.122 0.878 14 C -0.203 4.203 15 C 0.028 3.972 16 O -0.325 6.325 17 C 0.376 3.624 18 F -0.160 7.160 19 F -0.168 7.168 20 F -0.166 7.166 21 C -0.160 4.160 22 C -0.127 4.127 23 C -0.142 4.142 24 H 0.243 0.757 25 H 0.122 0.878 26 H -0.227 1.227 27 H -0.208 1.208 28 H 0.140 0.860 29 H 0.150 0.850 30 H 0.149 0.851 31 H 0.145 0.855 32 H 0.257 0.743 33 H 0.135 0.865 34 H 0.114 0.886 35 H 0.258 0.742 36 H 0.125 0.875 37 H 0.147 0.853 38 H 0.160 0.840 39 H 0.158 0.842 Dipole moment (debyes) X Y Z Total from point charges 3.172 -0.370 -1.688 3.612 hybrid contribution 0.615 -0.488 -0.653 1.021 sum 3.787 -0.858 -2.341 4.534 Atomic orbital electron populations 1.86446 1.17487 1.82225 1.50388 1.25216 0.85145 1.11068 0.97227 0.93596 0.77980 0.75643 0.84715 1.20402 0.99625 0.95358 0.97423 1.21075 0.99371 0.94331 0.97882 1.21238 0.97246 1.00702 0.94165 1.19565 0.97732 0.94490 0.95352 1.20743 0.98993 1.04325 0.89705 1.20964 0.86966 0.77840 0.83669 1.90749 1.29812 1.41594 1.82980 1.45631 1.24821 1.54995 1.09786 1.21526 0.94414 0.95309 0.86324 0.87792 1.24221 1.02385 0.96376 0.97352 1.23600 0.87525 1.01828 0.84265 1.86499 1.13252 1.67191 1.65515 1.21560 0.73848 0.73403 0.93589 1.93187 1.41905 1.87130 1.93789 1.93179 1.61854 1.74327 1.87460 1.93208 1.95619 1.37441 1.90378 1.23582 0.97507 0.99098 0.95799 1.21233 1.00056 0.94110 0.97308 1.21166 0.98272 1.00027 0.94695 0.75664 0.87756 1.22727 1.20840 0.86029 0.85047 0.85066 0.85502 0.74293 0.86508 0.88552 0.74175 0.87534 0.85322 0.83999 0.84217 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -1.94 12.77 -148.98 -1.90 -3.84 16 2 C -0.08 -0.17 2.82 71.23 0.20 0.03 16 3 Si 0.77 -0.17 29.79 68.60 2.04 1.88 16 4 C -0.13 -0.39 5.39 -19.87 -0.11 -0.50 16 5 C -0.11 -0.46 9.61 22.27 0.21 -0.24 16 6 C -0.12 -0.28 9.70 22.27 0.22 -0.06 16 7 C -0.07 -0.03 4.37 -19.86 -0.09 -0.12 16 8 C -0.10 0.57 5.83 29.10 0.17 0.74 16 9 C 0.52 -0.34 7.82 87.66 0.69 0.34 16 10 O -0.57 -5.02 15.63 -3.06 -0.05 -5.07 16 11 N -0.70 3.76 5.15 -440.03 -2.27 1.50 16 12 C 0.13 -0.58 4.32 45.52 0.20 -0.39 16 13 H 0.10 -0.10 7.46 -2.39 -0.02 -0.12 16 14 C -0.16 0.97 7.15 31.12 0.22 1.19 16 15 C 0.07 -0.44 1.36 -10.27 -0.01 -0.45 16 16 O -0.52 4.17 12.14 -148.98 -1.81 2.36 16 17 C 0.43 -0.85 2.85 71.98 0.21 -0.64 16 18 F -0.18 0.07 15.76 44.97 0.71 0.78 16 19 F -0.19 0.16 16.65 44.97 0.75 0.91 16 20 F -0.19 -0.24 17.18 44.97 0.77 0.53 16 21 C -0.12 0.83 7.01 31.12 0.22 1.05 16 22 C -0.11 -0.04 9.70 22.27 0.22 0.17 16 23 C -0.12 -0.14 8.67 22.27 0.19 0.05 16 24 H 0.39 -1.50 8.70 -74.06 -0.64 -2.14 16 25 H 0.10 0.33 7.96 -2.39 -0.02 0.31 16 26 H -0.30 -2.10 7.11 99.48 0.71 -1.39 16 27 H -0.28 -1.01 7.11 99.48 0.71 -0.30 16 28 H 0.12 0.48 8.06 -2.91 -0.02 0.45 16 29 H 0.13 -0.08 8.06 -2.91 -0.02 -0.10 16 30 H 0.13 -1.42 8.09 -2.39 -0.02 -1.44 16 31 H 0.13 -1.27 8.09 -2.39 -0.02 -1.29 16 32 H 0.42 -3.87 7.59 -92.71 -0.70 -4.58 16 33 H 0.12 -0.71 7.14 -2.39 -0.02 -0.72 16 34 H 0.10 -0.57 8.14 -2.39 -0.02 -0.59 16 35 H 0.41 -5.26 8.42 -74.06 -0.62 -5.88 16 36 H 0.11 -0.80 8.14 -2.39 -0.02 -0.82 16 37 H 0.13 -1.06 7.88 -2.39 -0.02 -1.08 16 38 H 0.14 -0.57 8.06 -2.91 -0.02 -0.59 16 39 H 0.14 -0.40 4.88 -2.91 -0.01 -0.41 16 Total: 0.00 -20.47 342.57 -0.01 -20.48 By element: Atomic # 1 Polarization: -19.91 SS G_CDS: -0.79 Total: -20.71 kcal Atomic # 6 Polarization: -1.35 SS G_CDS: 2.53 Total: 1.18 kcal Atomic # 7 Polarization: 3.76 SS G_CDS: -2.27 Total: 1.50 kcal Atomic # 8 Polarization: -2.79 SS G_CDS: -3.76 Total: -6.55 kcal Atomic # 9 Polarization: -0.01 SS G_CDS: 2.23 Total: 2.22 kcal Atomic # 14 Polarization: -0.17 SS G_CDS: 2.04 Total: 1.88 kcal Total: -20.47 -0.01 -20.48 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_17047570_12335836.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -189.308 kcal (2) G-P(sol) polarization free energy of solvation -20.467 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -209.775 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.013 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.480 kcal (6) G-S(sol) free energy of system = (1) + (5) -209.788 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.77 seconds