Wall clock time and date at job start Tue Mar 9 2021 13:35:16 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50703 * 1 3 3 C 1.34851 * 125.89681 * 2 1 4 4 C 1.40943 * 107.46517 * 180.23221 * 3 2 1 5 5 C 1.50700 * 126.26578 * 179.79214 * 4 3 2 6 6 O 1.42898 * 109.47323 * 254.96388 * 5 4 3 7 7 Si 1.86303 * 109.46905 * 14.96118 * 5 4 3 8 8 C 1.34845 * 107.46811 * 359.75938 * 4 3 2 9 9 C 1.50704 * 125.89967 * 179.97438 * 8 4 3 10 10 N 1.36562 * 125.90257 * 179.81809 * 2 1 3 11 11 C 1.40205 * 125.66979 * 0.02589 * 10 2 1 12 12 C 1.38828 * 120.06240 * 294.69111 * 11 10 2 13 13 C 1.38125 * 119.93194 * 180.02562 * 12 11 10 14 14 C 1.38275 * 120.06788 * 359.97438 * 13 12 11 15 15 C 1.50699 * 119.93542 * 179.97438 * 14 13 12 16 16 C 1.50706 * 109.46817 * 90.00124 * 15 14 13 17 17 O 1.21279 * 120.00072 * 359.97438 * 16 15 14 18 18 N 1.34777 * 119.99762 * 179.97438 * 16 15 14 19 19 C 1.46496 * 120.00258 * 179.97438 * 18 16 15 20 20 H 1.09002 * 112.84597 * 336.20253 * 19 18 16 21 21 C 1.53783 * 113.61176 * 107.50310 * 19 18 16 22 22 C 1.53780 * 87.08087 * 89.12298 * 21 19 18 23 23 O 1.42899 * 113.61072 * 270.88328 * 22 21 19 24 24 C 1.52996 * 113.69520 * 139.99292 * 22 21 19 25 25 F 1.39910 * 109.46747 * 322.45970 * 24 22 21 26 26 F 1.39892 * 109.47307 * 82.46207 * 24 22 21 27 27 F 1.39897 * 109.47189 * 202.46398 * 24 22 21 28 28 C 1.53772 * 113.61760 * 205.00304 * 19 18 16 29 29 C 1.38280 * 120.13004 * 0.27745 * 14 13 12 30 30 C 1.38121 * 120.06335 * 359.48931 * 29 14 13 31 31 H 1.09003 * 109.47155 * 270.17942 * 1 2 3 32 32 H 1.08993 * 109.47277 * 30.18502 * 1 2 3 33 33 H 1.08998 * 109.46830 * 150.18268 * 1 2 3 34 34 H 1.08000 * 126.26861 * 359.97438 * 3 2 1 35 35 H 1.08994 * 109.47237 * 134.95860 * 5 4 3 36 36 H 0.96702 * 114.00186 * 180.02562 * 6 5 4 37 37 H 1.48500 * 110.00299 * 300.00103 * 7 5 4 38 38 H 1.48500 * 110.00285 * 61.31807 * 7 5 4 39 39 H 1.09010 * 109.46719 * 270.02575 * 9 8 4 40 40 H 1.08996 * 109.47133 * 30.02150 * 9 8 4 41 41 H 1.08995 * 109.47457 * 150.02788 * 9 8 4 42 42 H 1.07999 * 120.03428 * 0.04332 * 12 11 10 43 43 H 1.08001 * 119.96520 * 180.02562 * 13 12 11 44 44 H 1.09000 * 109.46670 * 330.00348 * 15 14 13 45 45 H 1.09000 * 109.47247 * 210.00061 * 15 14 13 46 46 H 0.96999 * 120.00047 * 0.02562 * 18 16 15 47 47 H 1.09002 * 113.61009 * 203.66947 * 21 19 18 48 48 H 1.08998 * 113.61477 * 334.57012 * 21 19 18 49 49 H 0.96696 * 114.00038 * 277.49593 * 23 22 21 50 50 H 1.09006 * 113.61862 * 25.43396 * 28 19 18 51 51 H 1.09007 * 113.61676 * 156.33778 * 28 19 18 52 52 H 1.08000 * 119.96880 * 179.74468 * 29 14 13 53 53 H 1.08004 * 120.03071 * 180.25120 * 30 29 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2977 1.0924 0.0000 4 6 3.6348 0.6468 -0.0054 5 6 4.8647 1.5177 -0.0118 6 8 5.4497 1.5063 -1.3155 7 14 4.3928 3.2619 0.4419 8 6 3.6122 -0.7015 -0.0032 9 6 4.8179 -1.6056 -0.0078 10 7 2.3078 -1.1062 0.0035 11 6 1.8646 -2.4363 0.0072 12 6 1.1682 -2.9343 1.1001 13 6 0.7333 -4.2453 1.1011 14 6 0.9905 -5.0613 0.0149 15 6 0.5151 -6.4914 0.0194 16 6 -0.8685 -6.5626 -0.5737 17 8 -1.4149 -5.5517 -0.9614 18 7 -1.4987 -7.7498 -0.6733 19 6 -2.8439 -7.8191 -1.2493 20 1 -3.3840 -6.8751 -1.1777 21 6 -2.8815 -8.4478 -2.6523 22 6 -3.0534 -9.8065 -1.9530 23 8 -1.8163 -10.4513 -1.6432 24 6 -4.0491 -10.7354 -2.6504 25 9 -5.1196 -9.9834 -3.1465 26 9 -3.4115 -11.3930 -3.7078 27 9 -4.5268 -11.6790 -1.7347 28 6 -3.6577 -9.0324 -0.7696 29 6 1.6884 -4.5696 -1.0729 30 6 2.1216 -3.2582 -1.0817 31 1 -0.3633 0.0032 1.0277 32 1 -0.3633 0.8883 -0.5167 33 1 -0.3633 -0.8916 -0.5110 34 1 1.9669 2.1205 -0.0004 35 1 5.5840 1.1358 0.7125 36 1 6.2477 2.0469 -1.3933 37 1 3.4122 3.7941 -0.5382 38 1 3.8123 3.2920 1.8084 39 1 5.1036 -1.8248 -1.0367 40 1 5.6449 -1.1108 0.5014 41 1 4.5772 -2.5349 0.5082 42 1 0.9665 -2.2972 1.9485 43 1 0.1911 -4.6331 1.9509 44 1 0.4908 -6.8629 1.0439 45 1 1.1962 -7.1026 -0.5728 46 1 -1.0618 -8.5583 -0.3629 47 1 -3.7477 -8.1476 -3.2420 48 1 -1.9430 -8.3533 -3.1984 49 1 -1.4312 -10.9398 -2.3835 50 1 -3.3458 -9.4101 0.2043 51 1 -4.7361 -8.8922 -0.8447 52 1 1.8914 -5.2105 -1.9181 53 1 2.6632 -2.8735 -1.9333 There are 78 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 78 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_17047570_12335864.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:35:16 Heat of formation + Delta-G solvation = -157.713362 kcal Electronic energy + Delta-G solvation = -40976.407897 eV Core-core repulsion = 35173.615194 eV Total energy + Delta-G solvation = -5802.792703 eV No. of doubly occupied orbitals = 78 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 425.165 amu Computer time = 1.87 seconds Orbital eigenvalues (eV) -51.25897 -48.80684 -48.73903 -42.96620 -41.65379 -40.53859 -39.47390 -37.64704 -36.42906 -35.00253 -34.13612 -33.83963 -32.16920 -32.10600 -30.26008 -29.16850 -28.25875 -27.18090 -26.86115 -24.74932 -24.17526 -23.97171 -23.11354 -21.75687 -21.10026 -20.95854 -20.06595 -20.05266 -19.55068 -19.43157 -18.31481 -18.14915 -18.04660 -17.39546 -17.17927 -17.02575 -16.49761 -16.20861 -15.98317 -15.94108 -15.64429 -15.56901 -15.44970 -15.40065 -15.18409 -15.05365 -14.96730 -14.92039 -14.84560 -14.76802 -14.64808 -14.59361 -14.30049 -14.20862 -13.96869 -13.82506 -13.78702 -13.68597 -13.50289 -13.23907 -13.20518 -12.97343 -12.85235 -12.80864 -12.62481 -12.54108 -12.40821 -12.12630 -11.94784 -11.90752 -11.23737 -11.06570 -10.23696 -10.16742 -10.16583 -10.11788 -9.50242 -8.97780 -4.94879 -0.12214 0.22735 1.00434 1.38973 1.50310 1.54511 1.57547 1.71690 1.73771 1.99447 2.09814 2.40977 2.54949 2.59365 2.66382 2.85350 3.39376 3.48119 3.53081 3.54700 3.62016 3.68312 3.74331 3.79510 3.89824 3.95923 4.09258 4.11836 4.21642 4.23393 4.24117 4.31317 4.44275 4.45643 4.48906 4.50416 4.51919 4.53280 4.54637 4.66108 4.66525 4.69103 4.75203 4.77918 4.85861 4.88237 4.95137 4.97918 5.11209 5.17733 5.24506 5.40357 5.47254 5.69107 5.80831 6.01783 6.24783 6.40322 6.53788 7.02703 7.22971 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.081 4.081 2 C 0.018 3.982 3 C -0.220 4.220 4 C -0.182 4.182 5 C -0.038 4.038 6 O -0.566 6.566 7 Si 0.787 3.213 8 C 0.043 3.957 9 C -0.075 4.075 10 N -0.402 5.402 11 C 0.096 3.904 12 C -0.115 4.115 13 C -0.094 4.094 14 C -0.058 4.058 15 C -0.099 4.099 16 C 0.517 3.483 17 O -0.576 6.576 18 N -0.698 5.698 19 C 0.130 3.870 20 H 0.103 0.897 21 C -0.166 4.166 22 C 0.073 3.927 23 O -0.514 6.514 24 C 0.430 3.570 25 F -0.179 7.179 26 F -0.187 7.187 27 F -0.185 7.185 28 C -0.121 4.121 29 C -0.094 4.094 30 C -0.116 4.116 31 H 0.082 0.918 32 H 0.087 0.913 33 H 0.062 0.938 34 H 0.129 0.871 35 H 0.084 0.916 36 H 0.398 0.602 37 H -0.306 1.306 38 H -0.300 1.300 39 H 0.077 0.923 40 H 0.093 0.907 41 H 0.067 0.933 42 H 0.127 0.873 43 H 0.150 0.850 44 H 0.136 0.864 45 H 0.136 0.864 46 H 0.420 0.580 47 H 0.115 0.885 48 H 0.095 0.905 49 H 0.405 0.595 50 H 0.108 0.892 51 H 0.128 0.872 52 H 0.149 0.851 53 H 0.124 0.876 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.287 -5.400 2.583 7.363 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.138 4.138 2 C -0.091 4.091 3 C -0.244 4.244 4 C -0.188 4.188 5 C -0.148 4.148 6 O -0.376 6.376 7 Si 0.694 3.306 8 C -0.067 4.067 9 C -0.133 4.133 10 N -0.076 5.076 11 C 0.008 3.992 12 C -0.134 4.134 13 C -0.112 4.112 14 C -0.058 4.058 15 C -0.138 4.138 16 C 0.305 3.695 17 O -0.455 6.455 18 N -0.351 5.351 19 C 0.024 3.976 20 H 0.121 0.879 21 C -0.205 4.205 22 C 0.029 3.971 23 O -0.323 6.323 24 C 0.376 3.624 25 F -0.161 7.161 26 F -0.168 7.168 27 F -0.166 7.166 28 C -0.159 4.159 29 C -0.112 4.112 30 C -0.135 4.135 31 H 0.101 0.899 32 H 0.106 0.894 33 H 0.081 0.919 34 H 0.147 0.853 35 H 0.102 0.898 36 H 0.249 0.751 37 H -0.234 1.234 38 H -0.228 1.228 39 H 0.095 0.905 40 H 0.111 0.889 41 H 0.086 0.914 42 H 0.145 0.855 43 H 0.168 0.832 44 H 0.154 0.846 45 H 0.154 0.846 46 H 0.259 0.741 47 H 0.133 0.867 48 H 0.114 0.886 49 H 0.258 0.742 50 H 0.127 0.873 51 H 0.146 0.854 52 H 0.167 0.833 53 H 0.142 0.858 Dipole moment (debyes) X Y Z Total from point charges 2.554 -4.640 2.979 6.077 hybrid contribution -0.549 -1.052 -0.859 1.465 sum 2.004 -5.692 2.121 6.396 Atomic orbital electron populations 1.20350 0.86561 1.03490 1.03410 1.20701 0.94517 0.85035 1.08869 1.20638 0.93202 0.97444 1.13148 1.18977 0.93981 0.92644 1.13210 1.24067 0.93972 1.08396 0.88405 1.86478 1.47298 1.74265 1.29520 0.95012 0.84595 0.76076 0.74895 1.20712 0.84879 0.94122 1.06946 1.20332 0.92493 0.97206 1.03236 1.41556 1.05513 1.03610 1.56908 1.17854 1.02286 0.82669 0.96425 1.21209 0.98664 0.96682 0.96833 1.21161 0.98466 0.92269 0.99321 1.19652 0.96455 0.95903 0.93808 1.20784 0.92931 0.94021 1.06045 1.20974 0.88160 0.82706 0.77620 1.90763 1.68431 1.36198 1.50145 1.45614 1.16551 1.10084 1.62825 1.21520 0.84345 0.99118 0.92610 0.87887 1.24225 1.05645 0.92201 0.98423 1.23586 0.84963 0.89370 0.99215 1.86493 1.32966 1.70301 1.42589 1.21563 0.82507 0.80847 0.77496 1.93188 1.58648 1.75911 1.88337 1.93178 1.81490 1.82810 1.59357 1.93209 1.89496 1.67361 1.66526 1.23574 1.01767 0.92599 0.97926 1.21147 0.97070 0.94420 0.98572 1.21200 1.00962 0.94574 0.96728 0.89909 0.89446 0.91917 0.85300 0.89770 0.75118 1.23443 1.22789 0.90478 0.88873 0.91422 0.85495 0.83231 0.84589 0.84628 0.74144 0.86670 0.88640 0.74166 0.87333 0.85382 0.83341 0.85819 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.08 -0.53 9.95 71.24 0.71 0.18 16 2 C 0.02 0.21 6.81 41.05 0.28 0.49 16 3 C -0.22 -2.96 9.27 22.15 0.21 -2.75 16 4 C -0.18 -2.11 5.39 -19.98 -0.11 -2.22 16 5 C -0.04 -0.19 2.59 71.24 0.18 0.00 16 6 O -0.57 -2.44 12.86 -148.98 -1.92 -4.35 16 7 Si 0.79 2.65 30.84 68.60 2.12 4.77 16 8 C 0.04 0.44 6.81 41.04 0.28 0.72 16 9 C -0.08 -0.28 9.72 71.24 0.69 0.41 16 10 N -0.40 -4.13 2.79 -320.26 -0.89 -5.03 16 11 C 0.10 0.66 4.65 38.08 0.18 0.84 16 12 C -0.11 -0.47 9.74 22.38 0.22 -0.25 16 13 C -0.09 -0.01 9.69 22.25 0.22 0.21 16 14 C -0.06 0.08 4.37 -19.85 -0.09 -0.01 16 15 C -0.10 0.79 5.83 29.10 0.17 0.96 16 16 C 0.52 -0.99 7.82 87.66 0.69 -0.30 16 17 O -0.58 -4.73 15.63 -3.03 -0.05 -4.77 16 18 N -0.70 4.44 5.15 -440.05 -2.27 2.17 16 19 C 0.13 -0.63 4.32 45.52 0.20 -0.44 16 20 H 0.10 -0.12 7.46 -2.39 -0.02 -0.14 16 21 C -0.17 0.97 7.15 31.12 0.22 1.19 16 22 C 0.07 -0.46 1.36 -10.27 -0.01 -0.48 16 23 O -0.51 4.43 12.14 -148.98 -1.81 2.62 16 24 C 0.43 -0.88 2.85 71.98 0.21 -0.67 16 25 F -0.18 0.05 15.76 44.97 0.71 0.76 16 26 F -0.19 0.15 16.65 44.97 0.75 0.90 16 27 F -0.18 -0.20 17.18 44.97 0.77 0.57 16 28 C -0.12 0.88 7.01 31.12 0.22 1.10 16 29 C -0.09 -0.04 9.69 22.25 0.22 0.18 16 30 C -0.12 -0.54 9.73 22.38 0.22 -0.32 16 31 H 0.08 0.32 8.14 -2.39 -0.02 0.30 16 32 H 0.09 0.41 8.14 -2.39 -0.02 0.39 16 33 H 0.06 0.46 7.83 -2.39 -0.02 0.44 16 34 H 0.13 1.70 6.55 -2.91 -0.02 1.68 16 35 H 0.08 0.02 7.50 -2.39 -0.02 0.01 16 36 H 0.40 -2.77 8.74 -74.06 -0.65 -3.42 16 37 H -0.31 -3.54 7.06 99.48 0.70 -2.84 16 38 H -0.30 -2.92 7.11 99.48 0.71 -2.21 16 39 H 0.08 0.25 8.14 -2.38 -0.02 0.23 16 40 H 0.09 0.08 7.50 -2.39 -0.02 0.06 16 41 H 0.07 0.17 7.83 -2.39 -0.02 0.15 16 42 H 0.13 0.46 8.06 -2.91 -0.02 0.43 16 43 H 0.15 -0.66 8.06 -2.91 -0.02 -0.68 16 44 H 0.14 -1.78 8.08 -2.39 -0.02 -1.80 16 45 H 0.14 -1.77 8.08 -2.39 -0.02 -1.79 16 46 H 0.42 -4.40 7.59 -92.71 -0.70 -5.11 16 47 H 0.12 -0.65 7.14 -2.39 -0.02 -0.67 16 48 H 0.10 -0.55 8.14 -2.39 -0.02 -0.57 16 49 H 0.41 -5.40 8.42 -74.06 -0.62 -6.03 16 50 H 0.11 -0.90 8.14 -2.38 -0.02 -0.92 16 51 H 0.13 -1.09 7.88 -2.38 -0.02 -1.11 16 52 H 0.15 -0.59 8.06 -2.91 -0.02 -0.62 16 53 H 0.12 0.62 8.06 -2.91 -0.02 0.59 16 Total: 0.00 -28.50 451.50 1.36 -27.15 By element: Atomic # 1 Polarization: -22.68 SS G_CDS: -0.94 Total: -23.62 kcal Atomic # 6 Polarization: -6.05 SS G_CDS: 4.88 Total: -1.17 kcal Atomic # 7 Polarization: 0.30 SS G_CDS: -3.16 Total: -2.86 kcal Atomic # 8 Polarization: -2.73 SS G_CDS: -3.77 Total: -6.50 kcal Atomic # 9 Polarization: 0.00 SS G_CDS: 2.23 Total: 2.23 kcal Atomic # 14 Polarization: 2.65 SS G_CDS: 2.12 Total: 4.77 kcal Total: -28.50 1.36 -27.15 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_17047570_12335864.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -130.567 kcal (2) G-P(sol) polarization free energy of solvation -28.503 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -159.070 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.356 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -27.146 kcal (6) G-S(sol) free energy of system = (1) + (5) -157.713 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.87 seconds