Wall clock time and date at job start Tue Mar 9 2021 13:36:38 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86299 * 109.46840 * 2 1 4 4 C 1.50702 * 109.46922 * 240.00089 * 2 1 3 5 5 C 1.38503 * 119.80457 * 119.97943 * 4 2 1 6 6 C 1.37827 * 120.30282 * 179.97438 * 5 4 2 7 7 C 1.39672 * 119.90307 * 359.76655 * 6 5 4 8 8 C 1.47537 * 120.19084 * 180.25300 * 7 6 5 9 9 O 1.21591 * 120.00293 * 180.24999 * 8 7 6 10 10 N 1.34780 * 119.99907 * 0.25229 * 8 7 6 11 11 C 1.46497 * 119.99944 * 180.02562 * 10 8 7 12 12 H 1.09007 * 112.85049 * 23.79997 * 11 10 8 13 13 C 1.53782 * 113.61886 * 154.99860 * 11 10 8 14 14 C 1.53790 * 87.07821 * 89.11347 * 13 11 10 15 15 O 1.42894 * 113.61679 * 270.80011 * 14 13 11 16 16 C 1.53000 * 113.61005 * 139.98255 * 14 13 11 17 17 F 1.39905 * 109.46974 * 60.00378 * 16 14 13 18 18 F 1.39896 * 109.47071 * 180.02562 * 16 14 13 19 19 F 1.39899 * 109.47530 * 300.00431 * 16 14 13 20 20 C 1.53779 * 87.07901 * 25.43857 * 14 13 11 21 21 C 1.40169 * 119.61741 * 0.50436 * 7 6 5 22 22 O 1.35655 * 120.15088 * 179.75133 * 21 7 6 23 23 C 1.38096 * 119.80435 * 299.99609 * 4 2 1 24 24 H 0.96699 * 114.00132 * 59.99920 * 1 2 3 25 25 H 1.08996 * 109.47018 * 119.99748 * 2 1 3 26 26 H 1.48496 * 110.00060 * 60.00126 * 3 2 1 27 27 H 1.48508 * 109.99901 * 181.32100 * 3 2 1 28 28 H 1.08000 * 119.85020 * 0.02562 * 5 4 2 29 29 H 1.07999 * 120.05239 * 179.97438 * 6 5 4 30 30 H 0.96999 * 120.00267 * 0.02562 * 10 8 7 31 31 H 1.08993 * 113.61615 * 203.66283 * 13 11 10 32 32 H 1.09005 * 113.61156 * 334.57262 * 13 11 10 33 33 H 0.96704 * 113.99941 * 179.97438 * 15 14 13 34 34 H 1.09002 * 113.61253 * 220.01512 * 20 14 13 35 35 H 1.08993 * 113.61699 * 89.11509 * 20 14 13 36 36 H 0.96696 * 114.00102 * 269.72252 * 22 21 7 37 37 H 1.08000 * 119.96132 * 0.02562 * 23 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9313 -0.7104 -1.2305 5 6 2.7270 -0.0333 -2.1398 6 6 3.1924 -0.6731 -3.2683 7 6 2.8649 -2.0119 -3.4947 8 6 3.3643 -2.7047 -4.6978 9 8 3.0734 -3.8689 -4.8938 10 7 4.1431 -2.0470 -5.5796 11 6 4.6385 -2.7347 -6.7745 12 1 4.0178 -3.5833 -7.0624 13 6 4.9647 -1.7864 -7.9404 14 6 6.3810 -1.6764 -7.3513 15 8 6.5228 -0.6251 -6.3939 16 6 7.4860 -1.6694 -8.4095 17 9 7.3043 -0.5783 -9.2662 18 9 8.7321 -1.5675 -7.7818 19 9 7.4320 -2.8562 -9.1482 20 6 6.1409 -3.0583 -6.7207 21 6 2.0547 -2.6920 -2.5750 22 8 1.7258 -3.9909 -2.7868 23 6 1.5953 -2.0326 -1.4450 24 1 -0.3933 0.4417 -0.7650 25 1 1.7923 -0.5138 0.8900 26 1 1.5614 2.4679 1.2085 27 1 3.5346 1.7704 -0.0322 28 1 2.9846 1.0006 -1.9633 29 1 3.8122 -0.1411 -3.9748 30 1 4.3756 -1.1184 -5.4231 31 1 4.9344 -2.2689 -8.9172 32 1 4.4060 -0.8509 -7.9116 33 1 7.4114 -0.5512 -6.0196 34 1 6.5319 -3.1496 -5.7073 35 1 6.4322 -3.8884 -7.3641 36 1 0.9090 -4.1128 -3.2898 37 1 0.9739 -2.5537 -0.7318 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_22_17047570_13422076.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:36:38 Heat of formation + Delta-G solvation = -240.307775 kcal Electronic energy + Delta-G solvation = -29213.294530 eV Core-core repulsion = 24316.030499 eV Total energy + Delta-G solvation = -4897.264031 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 334.091 amu Computer time = 0.65 seconds Orbital eigenvalues (eV) -51.27415 -48.82183 -48.72976 -41.94986 -41.08783 -39.50510 -38.40362 -37.19711 -36.57150 -34.37468 -32.57817 -31.15668 -28.98334 -27.48180 -27.37094 -24.53231 -23.97034 -23.36266 -21.88238 -21.06812 -20.25904 -19.59169 -19.47607 -19.35150 -18.68892 -18.25354 -17.44185 -17.28898 -16.77248 -16.54532 -16.34242 -16.13211 -15.84884 -15.77697 -15.59377 -15.40508 -15.25351 -15.18435 -14.94209 -14.91435 -14.89851 -14.79004 -14.44032 -14.07169 -13.90499 -13.82468 -13.25455 -13.07852 -13.01736 -12.80256 -12.35033 -12.18002 -12.06277 -11.69633 -11.39861 -10.89874 -10.59420 -10.27508 -10.09690 -9.83802 -5.15546 -0.45673 0.06665 1.13919 1.41816 1.51081 1.69633 1.84609 1.87092 2.22676 2.47363 2.50491 2.54096 2.73039 3.05059 3.27434 3.30727 3.34037 3.40110 3.41150 3.58707 3.70434 3.94331 4.05795 4.17330 4.22947 4.28832 4.30794 4.46652 4.51875 4.57526 4.61642 4.66334 4.92502 5.08092 5.15786 5.34900 5.49172 5.88976 6.40200 6.42060 6.67223 7.14508 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.537 6.537 2 C -0.074 4.074 3 Si 0.693 3.307 4 C -0.075 4.075 5 C -0.136 4.136 6 C -0.063 4.063 7 C -0.165 4.165 8 C 0.562 3.438 9 O -0.516 6.516 10 N -0.708 5.708 11 C 0.137 3.863 12 H 0.121 0.879 13 C -0.125 4.125 14 C 0.061 3.939 15 O -0.515 6.515 16 C 0.434 3.566 17 F -0.175 7.175 18 F -0.182 7.182 19 F -0.173 7.173 20 C -0.170 4.170 21 C 0.174 3.826 22 O -0.476 6.476 23 C -0.130 4.130 24 H 0.380 0.620 25 H 0.119 0.881 26 H -0.253 1.253 27 H -0.256 1.256 28 H 0.136 0.864 29 H 0.136 0.864 30 H 0.407 0.593 31 H 0.123 0.877 32 H 0.102 0.898 33 H 0.395 0.605 34 H 0.095 0.905 35 H 0.117 0.883 36 H 0.398 0.602 37 H 0.141 0.859 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.336 4.528 -1.674 5.009 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.342 6.342 2 C -0.185 4.185 3 Si 0.594 3.406 4 C -0.076 4.076 5 C -0.154 4.154 6 C -0.082 4.082 7 C -0.169 4.169 8 C 0.350 3.650 9 O -0.392 6.392 10 N -0.362 5.362 11 C 0.031 3.969 12 H 0.138 0.862 13 C -0.163 4.163 14 C 0.017 3.983 15 O -0.322 6.322 16 C 0.379 3.621 17 F -0.156 7.156 18 F -0.164 7.164 19 F -0.155 7.155 20 C -0.209 4.209 21 C 0.127 3.873 22 O -0.288 6.288 23 C -0.148 4.148 24 H 0.228 0.772 25 H 0.136 0.864 26 H -0.178 1.178 27 H -0.181 1.181 28 H 0.153 0.847 29 H 0.153 0.847 30 H 0.245 0.755 31 H 0.141 0.859 32 H 0.120 0.880 33 H 0.246 0.754 34 H 0.114 0.886 35 H 0.135 0.865 36 H 0.257 0.743 37 H 0.159 0.841 Dipole moment (debyes) X Y Z Total from point charges -1.066 3.940 -0.686 4.139 hybrid contribution 0.912 -0.100 -0.115 0.925 sum -0.154 3.841 -0.800 3.926 Atomic orbital electron populations 1.86536 1.16695 1.81667 1.49298 1.25189 0.85559 1.10467 0.97282 0.94704 0.80993 0.77428 0.87440 1.20458 0.96415 0.94351 0.96342 1.20956 0.99574 1.00107 0.94762 1.21184 0.97393 0.92616 0.96970 1.20362 1.04889 0.94851 0.96810 1.18065 0.78239 0.86290 0.82423 1.90843 1.57201 1.15738 1.75376 1.45600 1.51815 1.16037 1.22718 1.21544 0.94391 0.96168 0.84796 0.86154 1.23559 0.90887 1.02358 0.99519 1.23692 0.93938 0.91775 0.88845 1.86501 1.37456 1.51475 1.56795 1.21220 0.83399 0.74044 0.83391 1.93233 1.95131 1.54786 1.72432 1.93191 1.45414 1.95819 1.81958 1.93198 1.96351 1.47244 1.78668 1.24261 0.97934 0.95053 1.03680 1.18499 0.93361 0.83586 0.91815 1.84761 1.47402 1.19506 1.77108 1.21340 1.01266 0.93949 0.98292 0.77220 0.86409 1.17764 1.18078 0.84666 0.84670 0.75540 0.85907 0.87953 0.75431 0.88628 0.86522 0.74292 0.84130 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.58 12.76 -35.23 -0.45 0.13 16 2 C -0.07 0.11 2.81 36.01 0.10 0.21 16 3 Si 0.69 -1.71 29.77 -169.99 -5.06 -6.77 16 4 C -0.07 0.09 5.39 -104.58 -0.56 -0.48 16 5 C -0.14 0.31 8.64 -39.63 -0.34 -0.04 16 6 C -0.06 0.12 9.54 -39.20 -0.37 -0.25 16 7 C -0.17 -0.09 5.89 -104.85 -0.62 -0.71 16 8 C 0.56 0.93 7.76 -12.47 -0.10 0.84 16 9 O -0.52 -2.63 14.76 -16.59 -0.24 -2.87 16 10 N -0.71 0.87 5.10 -54.05 -0.28 0.59 16 11 C 0.14 -0.23 4.32 -67.12 -0.29 -0.52 16 12 H 0.12 -0.09 7.46 -51.92 -0.39 -0.48 16 13 C -0.13 0.39 7.01 -25.91 -0.18 0.21 16 14 C 0.06 -0.15 1.36 -89.80 -0.12 -0.27 16 15 O -0.51 1.65 12.15 -35.23 -0.43 1.22 16 16 C 0.43 -0.31 2.85 37.16 0.11 -0.20 16 17 F -0.17 -0.12 17.18 2.25 0.04 -0.09 16 18 F -0.18 0.01 16.65 2.25 0.04 0.05 16 19 F -0.17 0.01 15.75 2.25 0.04 0.05 16 20 C -0.17 0.37 7.15 -25.92 -0.19 0.19 16 21 C 0.17 0.24 6.72 -38.70 -0.26 -0.02 16 22 O -0.48 -1.09 11.58 -40.54 -0.47 -1.56 16 23 C -0.13 -0.03 9.53 -39.47 -0.38 -0.40 16 24 H 0.38 -1.94 8.70 45.56 0.40 -1.54 16 25 H 0.12 -0.11 7.96 -51.93 -0.41 -0.52 16 26 H -0.25 -0.27 7.11 56.52 0.40 0.13 16 27 H -0.26 0.07 7.11 56.52 0.40 0.47 16 28 H 0.14 -0.58 4.85 -52.49 -0.25 -0.84 16 29 H 0.14 -0.60 6.40 -52.49 -0.34 -0.94 16 30 H 0.41 -1.18 5.62 -40.82 -0.23 -1.41 16 31 H 0.12 -0.50 7.88 -51.93 -0.41 -0.91 16 32 H 0.10 -0.35 8.14 -51.93 -0.42 -0.77 16 33 H 0.39 -2.19 8.42 45.56 0.38 -1.81 16 34 H 0.10 -0.16 8.14 -51.93 -0.42 -0.58 16 35 H 0.12 -0.31 7.13 -51.93 -0.37 -0.68 16 36 H 0.40 -0.61 9.06 45.56 0.41 -0.19 16 37 H 0.14 0.01 8.06 -52.49 -0.42 -0.41 16 LS Contribution 326.73 15.07 4.92 4.92 Total: 0.00 -9.49 326.73 -6.77 -16.26 By element: Atomic # 1 Polarization: -8.80 SS G_CDS: -1.67 Total: -10.48 kcal Atomic # 6 Polarization: 1.74 SS G_CDS: -3.20 Total: -1.46 kcal Atomic # 7 Polarization: 0.87 SS G_CDS: -0.28 Total: 0.59 kcal Atomic # 8 Polarization: -1.49 SS G_CDS: -1.59 Total: -3.08 kcal Atomic # 9 Polarization: -0.10 SS G_CDS: 0.11 Total: 0.01 kcal Atomic # 14 Polarization: -1.71 SS G_CDS: -5.06 Total: -6.77 kcal Total LS contribution 4.92 Total: 4.92 kcal Total: -9.49 -6.77 -16.26 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_17047570_13422076.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -224.046 kcal (2) G-P(sol) polarization free energy of solvation -9.494 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -233.540 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.768 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.262 kcal (6) G-S(sol) free energy of system = (1) + (5) -240.308 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.65 seconds