Wall clock time and date at job start Tue Mar 9 2021 13:36:57 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86299 * 109.46908 * 2 1 4 4 C 1.50695 * 109.47097 * 119.99988 * 2 1 3 5 5 C 1.34849 * 125.89231 * 244.96139 * 4 2 1 6 6 C 1.40885 * 107.42038 * 179.80172 * 5 4 2 7 7 C 1.34852 * 107.41619 * 0.38023 * 6 5 4 8 8 C 1.50699 * 125.89133 * 179.88230 * 7 6 5 9 9 C 1.50698 * 109.47577 * 274.68889 * 8 7 6 10 10 O 1.21282 * 119.99364 * 0.02562 * 9 8 7 11 11 N 1.34774 * 120.00600 * 179.97438 * 9 8 7 12 12 C 1.46496 * 120.00099 * 180.02562 * 11 9 8 13 13 H 1.08994 * 112.91109 * 23.75176 * 12 11 9 14 14 C 1.53787 * 113.61210 * 155.00440 * 12 11 9 15 15 C 1.53778 * 87.08035 * 89.11438 * 14 12 11 16 16 O 1.42902 * 113.61260 * 270.88008 * 15 14 12 17 17 C 1.53003 * 113.61196 * 140.06532 * 15 14 12 18 18 F 1.39901 * 109.46963 * 59.99724 * 17 15 14 19 19 F 1.39896 * 109.47294 * 179.97438 * 17 15 14 20 20 F 1.39897 * 109.46987 * 299.99838 * 17 15 14 21 21 C 1.53778 * 87.08449 * 25.43264 * 15 14 12 22 22 N 1.36342 * 125.89093 * 65.00053 * 4 2 1 23 23 H 0.96697 * 114.00345 * 299.99970 * 1 2 3 24 24 H 1.08994 * 109.46962 * 240.00194 * 2 1 3 25 25 H 1.48501 * 109.99897 * 178.67918 * 3 2 1 26 26 H 1.48499 * 109.99878 * 300.00012 * 3 2 1 27 27 H 1.08000 * 126.28918 * 0.05306 * 5 4 2 28 28 H 1.07997 * 126.29374 * 180.23124 * 6 5 4 29 29 H 1.09005 * 109.47311 * 154.68862 * 8 7 6 30 30 H 1.09008 * 109.47184 * 34.69066 * 8 7 6 31 31 H 0.97002 * 119.99411 * 0.02562 * 11 9 8 32 32 H 1.08998 * 113.61103 * 203.66698 * 14 12 11 33 33 H 1.08997 * 113.61087 * 334.48007 * 14 12 11 34 34 H 0.96704 * 113.99439 * 180.02562 * 16 15 14 35 35 H 1.08993 * 113.61229 * 220.02023 * 21 15 14 36 36 H 1.09000 * 113.61263 * 89.11673 * 21 15 14 37 37 H 0.97001 * 125.63893 * 359.94214 * 22 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7104 1.2304 5 6 2.6308 -0.1488 2.2373 6 6 2.8941 -1.1595 3.1829 7 6 2.3528 -2.3021 2.7138 8 6 2.3933 -3.6445 3.3973 9 6 3.6798 -4.3474 3.0485 10 8 4.4849 -3.8107 2.3173 11 7 3.9363 -5.5718 3.5499 12 6 5.1873 -6.2547 3.2112 13 1 5.9799 -5.5670 2.9165 14 6 5.6280 -7.2893 4.2604 15 6 4.7927 -8.3188 3.4811 16 8 3.4310 -8.3924 3.9083 17 6 5.4572 -9.6929 3.3750 18 9 5.6665 -10.2100 4.6580 19 9 4.6273 -10.5578 2.6537 20 9 6.6853 -9.5674 2.7168 21 6 5.0025 -7.4337 2.2412 22 7 1.7577 -2.0319 1.5173 23 1 -0.3934 0.4417 0.7650 24 1 1.7923 -0.5138 -0.8900 25 1 3.5346 1.7703 0.0322 26 1 1.5614 2.4678 -1.2085 27 1 2.9302 0.8864 2.3080 28 1 3.4327 -1.0415 4.1115 29 1 1.5482 -4.2473 3.0645 30 1 2.3369 -3.5045 4.4769 31 1 3.2925 -6.0008 4.1351 32 1 6.6982 -7.4955 4.2475 33 1 5.2483 -7.0847 5.2614 34 1 2.9008 -9.0386 3.4221 35 1 4.1167 -7.3466 1.6121 36 1 5.9017 -7.6795 1.6763 37 1 1.2880 -2.6738 0.9620 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_22_17047570_14644196.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:36:57 Heat of formation + Delta-G solvation = -188.334279 kcal Electronic energy + Delta-G solvation = -27206.489611 eV Core-core repulsion = 22537.424123 eV Total energy + Delta-G solvation = -4669.065488 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 321.102 amu Computer time = 0.62 seconds Orbital eigenvalues (eV) -51.29366 -48.84457 -48.74644 -42.32288 -41.61515 -39.82412 -37.67661 -36.61818 -34.28992 -32.96424 -31.86373 -29.64713 -28.61159 -27.39466 -25.36381 -24.12500 -22.29606 -21.29750 -21.08718 -21.00964 -20.19094 -19.59239 -19.48580 -18.89136 -18.19671 -17.42710 -17.21949 -16.79932 -16.43943 -16.22258 -16.07371 -15.63876 -15.52526 -15.20719 -15.18136 -15.05656 -14.94003 -14.93213 -14.82716 -14.50415 -14.40734 -14.14634 -13.99823 -13.90719 -13.75927 -13.47016 -13.11923 -12.89163 -12.73305 -12.07565 -12.01168 -11.89876 -11.42001 -10.96952 -10.60195 -10.23889 -9.71907 -8.90871 -4.95646 1.14558 1.28262 1.39909 1.53632 1.73870 1.83279 1.99980 2.12108 2.26885 2.45648 2.49459 2.51395 2.71756 3.25879 3.31880 3.38344 3.46823 3.60586 3.83691 3.89997 3.99121 4.04682 4.20994 4.29304 4.33610 4.43091 4.45506 4.53775 4.58238 4.63276 4.82279 5.31537 5.34805 5.35307 5.87012 6.05366 6.19618 6.38774 6.53634 6.65466 7.14881 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.547 6.547 2 C -0.050 4.050 3 Si 0.720 3.280 4 C -0.010 4.010 5 C -0.187 4.187 6 C -0.173 4.173 7 C 0.035 3.965 8 C -0.071 4.071 9 C 0.514 3.486 10 O -0.522 6.522 11 N -0.712 5.712 12 C 0.136 3.864 13 H 0.119 0.881 14 C -0.126 4.126 15 C 0.062 3.938 16 O -0.514 6.514 17 C 0.434 3.566 18 F -0.174 7.174 19 F -0.183 7.183 20 F -0.173 7.173 21 C -0.170 4.170 22 N -0.536 5.536 23 H 0.381 0.619 24 H 0.109 0.891 25 H -0.255 1.255 26 H -0.256 1.256 27 H 0.142 0.858 28 H 0.137 0.863 29 H 0.100 0.900 30 H 0.119 0.881 31 H 0.409 0.591 32 H 0.122 0.878 33 H 0.102 0.898 34 H 0.394 0.606 35 H 0.093 0.907 36 H 0.115 0.885 37 H 0.412 0.588 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.945 -0.230 3.495 4.576 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.352 6.352 2 C -0.160 4.160 3 Si 0.620 3.380 4 C -0.123 4.123 5 C -0.212 4.212 6 C -0.197 4.197 7 C -0.079 4.079 8 C -0.111 4.111 9 C 0.300 3.700 10 O -0.396 6.396 11 N -0.365 5.365 12 C 0.030 3.970 13 H 0.137 0.863 14 C -0.163 4.163 15 C 0.018 3.982 16 O -0.321 6.321 17 C 0.379 3.621 18 F -0.156 7.156 19 F -0.164 7.164 20 F -0.155 7.155 21 C -0.209 4.209 22 N -0.130 5.130 23 H 0.229 0.771 24 H 0.127 0.873 25 H -0.179 1.179 26 H -0.181 1.181 27 H 0.160 0.840 28 H 0.155 0.845 29 H 0.119 0.881 30 H 0.137 0.863 31 H 0.245 0.755 32 H 0.140 0.860 33 H 0.121 0.879 34 H 0.245 0.755 35 H 0.112 0.888 36 H 0.133 0.867 37 H 0.248 0.752 Dipole moment (debyes) X Y Z Total from point charges -1.670 0.779 2.294 2.942 hybrid contribution -0.518 -2.296 -0.497 2.406 sum -2.188 -1.517 1.797 3.212 Atomic orbital electron populations 1.86480 1.17405 1.81808 1.49510 1.24832 0.84875 1.10745 0.95573 0.94144 0.81065 0.76294 0.86496 1.20827 1.07251 0.84501 0.99751 1.20648 1.05438 0.99616 0.95453 1.20595 1.05737 0.91854 1.01533 1.19461 1.04174 0.95272 0.88944 1.20113 0.96173 0.92168 1.02681 1.20669 0.88533 0.80751 0.80045 1.90777 1.48050 1.65249 1.35522 1.45697 1.21070 1.18008 1.51745 1.21535 0.88251 0.93038 0.94192 0.86339 1.23548 1.00443 0.91918 1.00435 1.23686 0.85401 0.88399 1.00702 1.86518 1.17604 1.64410 1.63588 1.21226 0.77770 0.89011 0.74076 1.93234 1.94957 1.88651 1.38719 1.93190 1.71686 1.73091 1.78440 1.93198 1.45088 1.95975 1.81213 1.24251 1.05335 0.95137 0.96175 1.41794 1.44246 1.09154 1.17829 0.77108 0.87341 1.17913 1.18118 0.84045 0.84534 0.88126 0.86304 0.75462 0.86021 0.87923 0.75499 0.88798 0.86660 0.75159 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -0.19 12.88 -35.23 -0.45 -0.64 16 2 C -0.05 -0.02 3.08 36.00 0.11 0.09 16 3 Si 0.72 -0.38 30.60 -169.99 -5.20 -5.58 16 4 C -0.01 -0.01 6.50 -81.79 -0.53 -0.55 16 5 C -0.19 -0.31 9.37 -39.78 -0.37 -0.68 16 6 C -0.17 -0.33 10.76 -39.78 -0.43 -0.76 16 7 C 0.04 0.03 5.66 -81.79 -0.46 -0.43 16 8 C -0.07 0.15 6.24 -29.04 -0.18 -0.03 16 9 C 0.51 0.13 7.82 -10.99 -0.09 0.05 16 10 O -0.52 -2.56 15.64 5.56 0.09 -2.47 16 11 N -0.71 1.51 5.15 -53.02 -0.27 1.24 16 12 C 0.14 -0.25 4.32 -67.12 -0.29 -0.54 16 13 H 0.12 -0.06 7.47 -51.93 -0.39 -0.45 16 14 C -0.13 0.37 7.01 -25.92 -0.18 0.19 16 15 C 0.06 -0.16 1.36 -89.81 -0.12 -0.28 16 16 O -0.51 1.70 12.14 -35.23 -0.43 1.27 16 17 C 0.43 -0.28 2.85 37.16 0.11 -0.18 16 18 F -0.17 -0.15 17.18 2.25 0.04 -0.11 16 19 F -0.18 0.01 16.65 2.25 0.04 0.05 16 20 F -0.17 -0.01 15.76 2.25 0.04 0.03 16 21 C -0.17 0.41 7.15 -25.92 -0.19 0.23 16 22 N -0.54 -0.52 6.07 -5.44 -0.03 -0.56 16 23 H 0.38 -1.29 8.70 45.56 0.40 -0.89 16 24 H 0.11 0.11 7.96 -51.93 -0.41 -0.30 16 25 H -0.25 -0.61 7.11 56.52 0.40 -0.20 16 26 H -0.26 -0.60 7.11 56.52 0.40 -0.19 16 27 H 0.14 -0.03 6.24 -52.49 -0.33 -0.36 16 28 H 0.14 0.10 8.06 -52.49 -0.42 -0.33 16 29 H 0.10 -0.43 8.14 -51.93 -0.42 -0.85 16 30 H 0.12 -0.50 8.14 -51.92 -0.42 -0.92 16 31 H 0.41 -1.57 7.59 -40.82 -0.31 -1.88 16 32 H 0.12 -0.46 7.88 -51.93 -0.41 -0.87 16 33 H 0.10 -0.33 8.14 -51.93 -0.42 -0.75 16 34 H 0.39 -2.26 8.42 45.56 0.38 -1.87 16 35 H 0.09 -0.21 8.14 -51.93 -0.42 -0.63 16 36 H 0.12 -0.30 7.14 -51.93 -0.37 -0.67 16 37 H 0.41 -0.25 8.96 -40.82 -0.37 -0.62 16 LS Contribution 329.39 15.07 4.96 4.96 Total: 0.00 -9.52 329.39 -6.97 -16.48 By element: Atomic # 1 Polarization: -8.67 SS G_CDS: -3.12 Total: -11.78 kcal Atomic # 6 Polarization: -0.27 SS G_CDS: -2.62 Total: -2.89 kcal Atomic # 7 Polarization: 0.99 SS G_CDS: -0.31 Total: 0.68 kcal Atomic # 8 Polarization: -1.04 SS G_CDS: -0.79 Total: -1.84 kcal Atomic # 9 Polarization: -0.14 SS G_CDS: 0.11 Total: -0.03 kcal Atomic # 14 Polarization: -0.38 SS G_CDS: -5.20 Total: -5.58 kcal Total LS contribution 4.96 Total: 4.96 kcal Total: -9.52 -6.97 -16.48 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_17047570_14644196.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -171.851 kcal (2) G-P(sol) polarization free energy of solvation -9.517 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -181.368 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.967 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.484 kcal (6) G-S(sol) free energy of system = (1) + (5) -188.334 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.62 seconds